RNA–Protein interactions for RNA: ENST00000588086.5

USP36-210, Transcript of ubiquitin specific peptidase 36, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene USP36, Length 3,187 nt, Biotype non stop decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP36-210ENST00000588086 NISCHQ9Y2I1 1504 aa31.03■■■□□ 2.56
USP36-210ENST00000588086 SHROOM4Q9ULL8 1493 aa26.41■■□□□ 1.82
USP36-210ENST00000588086 CCDC180Q9P1Z9 1646 aa26.41■■□□□ 1.82
USP36-210ENST00000588086 ZCCHC6Q5VYS8 1495 aaKnown RBP26.16■■□□□ 1.78
USP36-210ENST00000588086 DCAF8L2P0C7V8 631 aa26.07■■□□□ 1.76
USP36-210ENST00000588086 SUPT5HO00267 1087 aaKnown RBP25.79■■□□□ 1.72
USP36-210ENST00000588086 DCAF1Q9Y4B6 1507 aa25.38■■□□□ 1.65
USP36-210ENST00000588086 ABCC9O60706 1549 aa24.94■■□□□ 1.58
USP36-210ENST00000588086 CHIC1Q5VXU3 224 aa24.85■■□□□ 1.57
USP36-210ENST00000588086 SCRIBQ14160 1630 aa24.84■■□□□ 1.57
USP36-210ENST00000588086 MYO15BQ96JP2 1530 aa24.74■■□□□ 1.55
USP36-210ENST00000588086 NACADO15069 1562 aa24.56■■□□□ 1.52
USP36-210ENST00000588086 RSF1Q96T23 1441 aaPredicted RBP24.49■■□□□ 1.51
USP36-210ENST00000588086 CECR2Q9BXF3 1484 aa24.3■■□□□ 1.48
USP36-210ENST00000588086 RB1CC1Q8TDY2 1594 aa24.23■■□□□ 1.47
USP36-210ENST00000588086 LOC105371045A0A1W2PR82 267 aa24.17■■□□□ 1.46
USP36-210ENST00000588086 MROH2BQ7Z745 1585 aa24.15■■□□□ 1.46
USP36-210ENST00000588086 TRIM41Q8WV44 630 aa23.99■■□□□ 1.43
USP36-210ENST00000588086 WIZO95785 1651 aa23.98■■□□□ 1.43
USP36-210ENST00000588086 PABPN1Q86U42 306 aaKnown RBP eCLIP23.87■■□□□ 1.41
USP36-210ENST00000588086 FAM9AQ8IZU1 332 aaPredicted RBP23.87■■□□□ 1.41
USP36-210ENST00000588086 BAZ1AQ9NRL2 1556 aaPredicted RBP23.84■■□□□ 1.41
USP36-210ENST00000588086 UNC13AQ9UPW8 1703 aa23.83■■□□□ 1.41
USP36-210ENST00000588086 PCGF6Q9BYE7 350 aa23.82■■□□□ 1.4
USP36-210ENST00000588086 EHMT2Q96KQ7 1210 aa23.73■■□□□ 1.39
USP36-210ENST00000588086 SMARCA4P51532 1647 aa23.67■■□□□ 1.38
USP36-210ENST00000588086 BICRAQ9NZM4 1560 aa23.6■■□□□ 1.37
USP36-210ENST00000588086 TOP2AP11388 1531 aaKnown RBP23.56■■□□□ 1.36
USP36-210ENST00000588086 CCDC88BA6NC98 1476 aa23.53■■□□□ 1.36
USP36-210ENST00000588086 HRCP23327 699 aa23.51■■□□□ 1.35
USP36-210ENST00000588086 SMARCA2P51531 1590 aa23.44■■□□□ 1.34
USP36-210ENST00000588086 EIF4G1Q04637 1599 aaKnown RBP23.43■■□□□ 1.34
USP36-210ENST00000588086 ABCC8Q09428 1581 aa23.38■■□□□ 1.33
USP36-210ENST00000588086 TRIM26Q12899 539 aaPredicted RBP23.36■■□□□ 1.33
USP36-210ENST00000588086 ATAD2BQ9ULI0 1458 aa23.19■■□□□ 1.3
USP36-210ENST00000588086 PPARGC1BQ86YN6 1023 aaKnown RBP23.19■■□□□ 1.3
USP36-210ENST00000588086 PEG3Q9GZU2 1588 aa23.18■■□□□ 1.3
USP36-210ENST00000588086 SOGA1O94964 1423 aa23.13■■□□□ 1.29
USP36-210ENST00000588086 BAZ1BQ9UIG0 1483 aaKnown RBP23.12■■□□□ 1.29
USP36-210ENST00000588086 RUSC2Q8N2Y8 1516 aa23.04■■□□□ 1.28
USP36-210ENST00000588086 WRNQ14191 1432 aaPredicted RBP eCLIP23.01■■□□□ 1.27
USP36-210ENST00000588086 CSRNP3Q8WYN3 585 aa22.99■■□□□ 1.27
USP36-210ENST00000588086 UBTFP17480 764 aaKnown RBP22.93■■□□□ 1.26
USP36-210ENST00000588086 SYNJ1O43426 1573 aa22.87■■□□□ 1.25
USP36-210ENST00000588086 TTBK1Q5TCY1 1321 aaPredicted RBP22.86■■□□□ 1.25
USP36-210ENST00000588086 EEA1Q15075 1411 aa22.84■■□□□ 1.25
USP36-210ENST00000588086 CEP162Q5TB80 1403 aa22.84■■□□□ 1.25
USP36-210ENST00000588086 TNIKQ9UKE5 1360 aa22.81■■□□□ 1.24
USP36-210ENST00000588086 NCAPD3P42695 1498 aa22.77■■□□□ 1.24
USP36-210ENST00000588086 GOLGA3Q08378 1498 aa22.72■■□□□ 1.23
USP36-210ENST00000588086 HMGXB3Q12766 1538 aa22.68■■□□□ 1.22
USP36-210ENST00000588086 ZEB1P37275 1124 aaPredicted RBP22.65■■□□□ 1.22
USP36-210ENST00000588086 RANGAP1P46060 587 aaPredicted RBP22.64■■□□□ 1.21
USP36-210ENST00000588086 CEP164Q9UPV0 1460 aa22.62■■□□□ 1.21
USP36-210ENST00000588086 TOP2BQ02880 1626 aa22.59■■□□□ 1.21
USP36-210ENST00000588086 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.58■■□□□ 1.21
USP36-210ENST00000588086 RAPGEF2Q9Y4G8 1499 aa22.56■■□□□ 1.2
USP36-210ENST00000588086 KIF21BO75037 1637 aa22.52■■□□□ 1.2
USP36-210ENST00000588086 CFTRP13569 1480 aa22.51■■□□□ 1.19
USP36-210ENST00000588086 CLIP1P30622 1438 aa22.49■■□□□ 1.19
USP36-210ENST00000588086 CUX1P39880 1505 aa22.48■■□□□ 1.19
USP36-210ENST00000588086 CCER1Q8TC90 406 aaPredicted RBP22.48■■□□□ 1.19
USP36-210ENST00000588086 BIVM-ERCC5R4GMW8 1640 aa22.47■■□□□ 1.19
USP36-210ENST00000588086 CC2D2AQ9P2K1 1620 aa22.37■■□□□ 1.17
USP36-210ENST00000588086 CADPSQ9ULU8 1353 aa22.36■■□□□ 1.17
USP36-210ENST00000588086 KIF27Q86VH2 1401 aa22.32■■□□□ 1.16
USP36-210ENST00000588086 PRXQ9BXM0 1461 aa22.32■■□□□ 1.16
USP36-210ENST00000588086 VPS8Q8N3P4 1428 aa22.32■■□□□ 1.16
USP36-210ENST00000588086 APLP2Q06481 763 aa22.32■■□□□ 1.16
USP36-210ENST00000588086 HNRNPUL2Q1KMD3 747 aaKnown RBP22.26■■□□□ 1.15
USP36-210ENST00000588086 ERICH3Q5RHP9 1530 aa22.22■■□□□ 1.15
USP36-210ENST00000588086 CUX2O14529 1486 aa22.2■■□□□ 1.14
USP36-210ENST00000588086 PRDM2Q13029 1718 aa22.16■■□□□ 1.14
USP36-210ENST00000588086 IGF1RP08069 1367 aa22.15■■□□□ 1.14
USP36-210ENST00000588086 FGD5Q6ZNL6 1462 aa22.15■■□□□ 1.14
USP36-210ENST00000588086 FANCD2Q9BXW9 1451 aa22.13■■□□□ 1.13
USP36-210ENST00000588086 ARAP1Q96P48 1450 aa22.13■■□□□ 1.13
USP36-210ENST00000588086 NESP48681 1621 aa22.12■■□□□ 1.13
USP36-210ENST00000588086 KANK4Q5T7N3 995 aaPredicted RBP22.09■■□□□ 1.13
USP36-210ENST00000588086 DNAJC5BQ9UF47 199 aa22.09■■□□□ 1.13
USP36-210ENST00000588086 CARMIL1Q5VZK9 1371 aa22.05■■□□□ 1.12
USP36-210ENST00000588086 RAD54L2Q9Y4B4 1467 aa22.01■■□□□ 1.11
USP36-210ENST00000588086 ARHGAP35Q9NRY4 1499 aa22.01■■□□□ 1.11
USP36-210ENST00000588086 TOPBP1Q92547 1522 aa21.94■■□□□ 1.1
USP36-210ENST00000588086 P3H3Q8IVL6 736 aa21.93■■□□□ 1.1
USP36-210ENST00000588086 POLA1P09884 1462 aaPredicted RBP21.92■■□□□ 1.1
USP36-210ENST00000588086 DNMBPQ6XZF7 1577 aa21.91■■□□□ 1.1
USP36-210ENST00000588086 ATP1B4Q9UN42 357 aaPredicted RBP21.84■■□□□ 1.09
USP36-210ENST00000588086 ABCA10Q8WWZ4 1543 aa21.84■■□□□ 1.09
USP36-210ENST00000588086 URB2Q14146 1524 aaKnown RBP21.82■■□□□ 1.08
USP36-210ENST00000588086 ITGAEP38570 1179 aa21.82■■□□□ 1.08
USP36-210ENST00000588086 DIEXFQ68CQ4 756 aaKnown RBP21.82■■□□□ 1.08
USP36-210ENST00000588086 TDRD9Q8NDG6 1382 aaKnown RBP21.8■■□□□ 1.08
USP36-210ENST00000588086 LAMC3Q9Y6N6 1575 aa21.8■■□□□ 1.08
USP36-210ENST00000588086 PDS5BQ9NTI5 1447 aa21.75■■□□□ 1.07
USP36-210ENST00000588086 RRBP1Q9P2E9 1410 aaKnown RBP21.73■■□□□ 1.07
USP36-210ENST00000588086 ZNF316A6NFI3 1004 aaPredicted RBP21.73■■□□□ 1.07
USP36-210ENST00000588086 CCNB3Q8WWL7 1395 aa21.72■■□□□ 1.07
USP36-210ENST00000588086 FHOD3Q2V2M9 1422 aa21.71■■□□□ 1.07
USP36-210ENST00000588086 TIAM1Q13009 1591 aa21.66■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms