RNA–Protein interactions for RNA: ENST00000347615.6

SMG7-201, Transcript of SMG7, nonsense mediated mRNA decay factor, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMG7, Length 5,788 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG7-201ENST00000347615 DCAF8L2P0C7V8 631 aa18.29■□□□□ 0.52
SMG7-201ENST00000347615 SUPT5HO00267 1087 aaKnown RBP17.85■□□□□ 0.45
SMG7-201ENST00000347615 NISCHQ9Y2I1 1504 aa17.75■□□□□ 0.43
SMG7-201ENST00000347615 SHROOM4Q9ULL8 1493 aa17.7■□□□□ 0.42
SMG7-201ENST00000347615 EHMT2Q96KQ7 1210 aa17.49■□□□□ 0.39
SMG7-201ENST00000347615 PCGF6Q9BYE7 350 aa16.99■□□□□ 0.31
SMG7-201ENST00000347615 TTBK1Q5TCY1 1321 aaPredicted RBP16.88■□□□□ 0.29
SMG7-201ENST00000347615 FAM9AQ8IZU1 332 aaPredicted RBP16.87■□□□□ 0.29
SMG7-201ENST00000347615 PPARGC1BQ86YN6 1023 aaKnown RBP16.48■□□□□ 0.23
SMG7-201ENST00000347615 RANGAP1P46060 587 aaPredicted RBP16.44■□□□□ 0.22
SMG7-201ENST00000347615 TRIM41Q8WV44 630 aa16.27■□□□□ 0.19
SMG7-201ENST00000347615 CCER1Q8TC90 406 aaPredicted RBP16.26■□□□□ 0.19
SMG7-201ENST00000347615 LOC105371045A0A1W2PR82 267 aa16.26■□□□□ 0.19
SMG7-201ENST00000347615 YTHDC1Q96MU7 727 aaKnown RBP16.25■□□□□ 0.19
SMG7-201ENST00000347615 APLP2Q06481 763 aa16.19■□□□□ 0.18
SMG7-201ENST00000347615 HRCP23327 699 aa16.16■□□□□ 0.18
SMG7-201ENST00000347615 PELP1Q8IZL8 1130 aaKnown RBP16.04■□□□□ 0.16
SMG7-201ENST00000347615 CENPBP07199 599 aaPredicted RBP16.03■□□□□ 0.16
SMG7-201ENST00000347615 CHIC1Q5VXU3 224 aa16.02■□□□□ 0.15
SMG7-201ENST00000347615 ZEB1P37275 1124 aaPredicted RBP16■□□□□ 0.15
SMG7-201ENST00000347615 UBTFP17480 764 aaKnown RBP15.98■□□□□ 0.15
SMG7-201ENST00000347615 TRIM26Q12899 539 aaPredicted RBP15.96■□□□□ 0.15
SMG7-201ENST00000347615 ATP1B4Q9UN42 357 aaPredicted RBP15.93■□□□□ 0.14
SMG7-201ENST00000347615 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.81■□□□□ 0.12
SMG7-201ENST00000347615 ITGAEP38570 1179 aa15.72■□□□□ 0.11
SMG7-201ENST00000347615 HNRNPUL2Q1KMD3 747 aaKnown RBP15.72■□□□□ 0.11
SMG7-201ENST00000347615 ERICH6Q7L0X2 663 aa15.69■□□□□ 0.1
SMG7-201ENST00000347615 CNGB1Q14028 1251 aaPredicted RBP15.57■□□□□ 0.08
SMG7-201ENST00000347615 DIEXFQ68CQ4 756 aaKnown RBP15.53■□□□□ 0.08
SMG7-201ENST00000347615 NEFLP07196 543 aa15.5■□□□□ 0.07
SMG7-201ENST00000347615 GTF3C3Q9Y5Q9 886 aa15.46■□□□□ 0.07
SMG7-201ENST00000347615 POLR3GLQ9BT43 218 aa15.41■□□□□ 0.06
SMG7-201ENST00000347615 BCANQ96GW7 911 aa15.37■□□□□ 0.05
SMG7-201ENST00000347615 MYT1Q01538 1121 aa15.28■□□□□ 0.04
SMG7-201ENST00000347615 NEUROD1Q13562 356 aa15.21■□□□□ 0.03
SMG7-201ENST00000347615 PABPN1Q86U42 306 aaKnown RBP eCLIP15.19■□□□□ 0.02
SMG7-201ENST00000347615 MYO15BQ96JP2 1530 aa15.19■□□□□ 0.02
SMG7-201ENST00000347615 ACIN1Q9UKV3 1341 aaKnown RBP15.15■□□□□ 0.02
SMG7-201ENST00000347615 FAM50AQ14320 339 aaKnown RBP15.14■□□□□ 0.01
SMG7-201ENST00000347615 SCAF1Q9H7N4 1312 aaKnown RBP15.09■□□□□ 0.01
SMG7-201ENST00000347615 ABCC9O60706 1549 aa15.09■□□□□ 0.01
SMG7-201ENST00000347615 ZNF316A6NFI3 1004 aaPredicted RBP15.07■□□□□ 0
SMG7-201ENST00000347615 P3H3Q8IVL6 736 aa14.96□□□□□ -0.01
SMG7-201ENST00000347615 TRIM52Q96A61 297 aa14.94□□□□□ -0.02
SMG7-201ENST00000347615 ARID3CA6NKF2 412 aa14.92□□□□□ -0.02
SMG7-201ENST00000347615 MYT1LQ9UL68 1186 aa14.92□□□□□ -0.02
SMG7-201ENST00000347615 ZNF326Q5BKZ1 582 aaKnown RBP14.91□□□□□ -0.02
SMG7-201ENST00000347615 DAXXQ9UER7 740 aaPredicted RBP14.89□□□□□ -0.03
SMG7-201ENST00000347615 DCAF1Q9Y4B6 1507 aa14.86□□□□□ -0.03
SMG7-201ENST00000347615 SLC4A1APQ9BWU0 796 aaKnown RBP14.83□□□□□ -0.04
SMG7-201ENST00000347615 CSRNP3Q8WYN3 585 aa14.83□□□□□ -0.04
SMG7-201ENST00000347615 MIER1Q8N108 512 aa14.83□□□□□ -0.04
SMG7-201ENST00000347615 ANP32CO43423 234 aa14.82□□□□□ -0.04
SMG7-201ENST00000347615 SCRIBQ14160 1630 aa14.82□□□□□ -0.04
SMG7-201ENST00000347615 HIRIP3Q9BW71 556 aaPredicted RBP14.81□□□□□ -0.04
SMG7-201ENST00000347615 FKBP8Q14318 412 aa14.8□□□□□ -0.04
SMG7-201ENST00000347615 RTL5Q5HYW3 569 aaPredicted RBP14.76□□□□□ -0.05
SMG7-201ENST00000347615 DDX10Q13206 875 aaKnown RBP14.75□□□□□ -0.05
SMG7-201ENST00000347615 ZCCHC6Q5VYS8 1495 aaKnown RBP14.75□□□□□ -0.05
SMG7-201ENST00000347615 CLSPNQ9HAW4 1339 aa14.73□□□□□ -0.05
SMG7-201ENST00000347615 CDK11AQ9UQ88 783 aaPredicted RBP14.72□□□□□ -0.05
SMG7-201ENST00000347615 IRX6P78412 446 aaPredicted RBP14.71□□□□□ -0.05
SMG7-201ENST00000347615 BCL11AQ9H165 835 aa14.69□□□□□ -0.06
SMG7-201ENST00000347615 SENP3-EIF4A1A0A087X0R7 540 aa14.68□□□□□ -0.06
SMG7-201ENST00000347615 NPM2Q86SE8 214 aaKnown RBP14.67□□□□□ -0.06
SMG7-201ENST00000347615 SALL2Q9Y467 1007 aaPredicted RBP14.62□□□□□ -0.07
SMG7-201ENST00000347615 FAM9BQ8IZU0 186 aa14.61□□□□□ -0.07
SMG7-201ENST00000347615 HNRNPUQ00839 825 aaKnown RBP eCLIP14.6□□□□□ -0.07
SMG7-201ENST00000347615 FBLN2P98095 1184 aa14.6□□□□□ -0.07
SMG7-201ENST00000347615 ZNF777Q9ULD5 760 aaPredicted RBP14.55□□□□□ -0.08
SMG7-201ENST00000347615 CHIC2Q9UKJ5 165 aa14.55□□□□□ -0.08
SMG7-201ENST00000347615 NBR1Q14596 966 aa14.55□□□□□ -0.08
SMG7-201ENST00000347615 TONSLQ96HA7 1378 aa14.45□□□□□ -0.1
SMG7-201ENST00000347615 CCDC180Q9P1Z9 1646 aa14.44□□□□□ -0.1
SMG7-201ENST00000347615 RSF1Q96T23 1441 aaPredicted RBP14.44□□□□□ -0.1
SMG7-201ENST00000347615 CEP162Q5TB80 1403 aa14.42□□□□□ -0.1
SMG7-201ENST00000347615 ANP32AP39687 249 aaKnown RBP14.41□□□□□ -0.1
SMG7-201ENST00000347615 CANXP27824 592 aaKnown RBP14.38□□□□□ -0.11
SMG7-201ENST00000347615 CLIP1P30622 1438 aa14.37□□□□□ -0.11
SMG7-201ENST00000347615 ARXQ96QS3 562 aa14.36□□□□□ -0.11
SMG7-201ENST00000347615 SIN3AQ96ST3 1273 aa14.36□□□□□ -0.11
SMG7-201ENST00000347615 EIF5BO60841 1220 aaKnown RBP14.35□□□□□ -0.11
SMG7-201ENST00000347615 KDM2AQ9Y2K7 1162 aa14.34□□□□□ -0.11
SMG7-201ENST00000347615 SENP3Q9H4L4 574 aaPredicted RBP14.33□□□□□ -0.11
SMG7-201ENST00000347615 MRS2Q9HD23 443 aa14.33□□□□□ -0.11
SMG7-201ENST00000347615 RRP7BPQ9NSQ0 103 aa14.33□□□□□ -0.12
SMG7-201ENST00000347615 SUPT16HQ9Y5B9 1047 aaKnown RBP14.31□□□□□ -0.12
SMG7-201ENST00000347615 CCDC136Q96JN2 1154 aa14.3□□□□□ -0.12
SMG7-201ENST00000347615 SLC24A1O60721 1099 aa14.28□□□□□ -0.12
SMG7-201ENST00000347615 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.26□□□□□ -0.134e-9■■□□□ 11.6
SMG7-201ENST00000347615 TMC1Q8TDI8 760 aa14.24□□□□□ -0.13
SMG7-201ENST00000347615 SOGA1O94964 1423 aa14.24□□□□□ -0.13
SMG7-201ENST00000347615 CECR2Q9BXF3 1484 aa14.22□□□□□ -0.13
SMG7-201ENST00000347615 ANP32EQ9BTT0 268 aa14.22□□□□□ -0.13
SMG7-201ENST00000347615 ZBTB47Q9UFB7 747 aaPredicted RBP14.21□□□□□ -0.13
SMG7-201ENST00000347615 RB1CC1Q8TDY2 1594 aa14.2□□□□□ -0.14
SMG7-201ENST00000347615 GOLGA3Q08378 1498 aa14.19□□□□□ -0.14
SMG7-201ENST00000347615 CHGAP10645 457 aaKnown RBP14.19□□□□□ -0.14
SMG7-201ENST00000347615 RTN4Q9NQC3 1192 aaKnown RBP14.17□□□□□ -0.14
SMG7-201ENST00000347615 MTUS2Q5JR59 1369 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms