RNA–Protein interactions for RNA: ENST00000507554.1

PGM3-207, Transcript of phosphoglucomutase 3, humanhuman

TSL 4

Gene PGM3, Length 556 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGM3-207ENST00000507554 AEBP2Q6ZN18 517 aaPredicted RBP22.04■■□□□ 1.12
PGM3-207ENST00000507554 CHIC1Q5VXU3 224 aa21.37■■□□□ 1.01
PGM3-207ENST00000507554 PHF23Q9BUL5 403 aaPredicted RBP18.76■□□□□ 0.59
PGM3-207ENST00000507554 SENP3Q9H4L4 574 aaPredicted RBP18.75■□□□□ 0.59
PGM3-207ENST00000507554 FOXD1Q16676 465 aa17.4■□□□□ 0.38
PGM3-207ENST00000507554 PLPPR3Q6T4P5 718 aa17.25■□□□□ 0.35
PGM3-207ENST00000507554 PPP6R1Q9UPN7 881 aa16.58■□□□□ 0.24
PGM3-207ENST00000507554 ADRA2BP18089 450 aa16.52■□□□□ 0.24
PGM3-207ENST00000507554 PIAS4Q8N2W9 510 aaPredicted RBP16.33■□□□□ 0.2
PGM3-207ENST00000507554 MSH5O43196 834 aa16.16■□□□□ 0.18
PGM3-207ENST00000507554 SCAF1Q9H7N4 1312 aaKnown RBP15.17■□□□□ 0.02
PGM3-207ENST00000507554 PPP4R3CPQ6ZMV5 832 aa15.15■□□□□ 0.02
PGM3-207ENST00000507554 MAPK8IP2Q13387 824 aaPredicted RBP15.04■□□□□ -0
PGM3-207ENST00000507554 POTEDQ86YR6 584 aa15.02■□□□□ -0
PGM3-207ENST00000507554 DMRT2Q9Y5R5 561 aa14.95□□□□□ -0.02
PGM3-207ENST00000507554 CNKSR2Q8WXI2 1034 aa14.8□□□□□ -0.04
PGM3-207ENST00000507554 NCBP3Q53F19 620 aaKnown RBP14.72□□□□□ -0.05
PGM3-207ENST00000507554 HOXD11P31277 338 aaPredicted RBP14.59□□□□□ -0.07
PGM3-207ENST00000507554 RNF216Q9NWF9 866 aaPredicted RBP14.58□□□□□ -0.08
PGM3-207ENST00000507554 KCNA4P22459 653 aa14.56□□□□□ -0.08
PGM3-207ENST00000507554 NPM3O75607 178 aaKnown RBP14.5□□□□□ -0.09
PGM3-207ENST00000507554 DNAJC5BQ9UF47 199 aa14.26□□□□□ -0.13
PGM3-207ENST00000507554 DCAF8L1A6NGE4 600 aa14.17□□□□□ -0.14
PGM3-207ENST00000507554 SLC4A1APQ9BWU0 796 aaKnown RBP13.83□□□□□ -0.2
PGM3-207ENST00000507554 RNF39Q9H2S5 420 aa13.83□□□□□ -0.2
PGM3-207ENST00000507554 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.81□□□□□ -0.2
PGM3-207ENST00000507554 SLC4A2P04920 1241 aa13.74□□□□□ -0.21
PGM3-207ENST00000507554 C1QBPQ07021 282 aaKnown RBP13.66□□□□□ -0.22
PGM3-207ENST00000507554 U3KPZ7 1027 aaPredicted RBP13.61□□□□□ -0.23
PGM3-207ENST00000507554 CACNB1Q02641 598 aaPredicted RBP13.53□□□□□ -0.24
PGM3-207ENST00000507554 FOXD4L1Q9NU39 408 aa13.5□□□□□ -0.25
PGM3-207ENST00000507554 MYCNP04198 464 aaPredicted RBP13.42□□□□□ -0.26
PGM3-207ENST00000507554 ZBTB22O15209 634 aa13.41□□□□□ -0.26
PGM3-207ENST00000507554 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.39□□□□□ -0.27
PGM3-207ENST00000507554 HNRNPUL2Q1KMD3 747 aaKnown RBP13.39□□□□□ -0.27
PGM3-207ENST00000507554 SAMD1Q6SPF0 538 aaPredicted RBP13.33□□□□□ -0.28
PGM3-207ENST00000507554 APLP2Q06481 763 aa13.3□□□□□ -0.28
PGM3-207ENST00000507554 SPINK5Q9NQ38 1064 aaPredicted RBP13.24□□□□□ -0.29
PGM3-207ENST00000507554 CAPN15O75808 1086 aa13.18□□□□□ -0.3
PGM3-207ENST00000507554 CSRNP3Q8WYN3 585 aa13.17□□□□□ -0.3
PGM3-207ENST00000507554 EHMT2Q96KQ7 1210 aa13.14□□□□□ -0.31
PGM3-207ENST00000507554 ZNF219Q9P2Y4 722 aaPredicted RBP13.13□□□□□ -0.31
PGM3-207ENST00000507554 ATXN8OSP0DMR3 200 aa13.09□□□□□ -0.31
PGM3-207ENST00000507554 DSG3P32926 999 aa13.07□□□□□ -0.32
PGM3-207ENST00000507554 TRHP20396 242 aaPredicted RBP13.05□□□□□ -0.32
PGM3-207ENST00000507554 ATF5Q9Y2D1 282 aaPredicted RBP13.02□□□□□ -0.33
PGM3-207ENST00000507554 ABCB7O75027 752 aa12.89□□□□□ -0.35
PGM3-207ENST00000507554 POLA2Q14181 598 aa12.84□□□□□ -0.35
PGM3-207ENST00000507554 ZBTB12Q9Y330 459 aaPredicted RBP12.68□□□□□ -0.38
PGM3-207ENST00000507554 NISCHQ9Y2I1 1504 aa12.52□□□□□ -0.41
PGM3-207ENST00000507554 FBLN2P98095 1184 aa12.5□□□□□ -0.41
PGM3-207ENST00000507554 MKRN4PQ13434 485 aaPredicted RBP12.48□□□□□ -0.41
PGM3-207ENST00000507554 RBM42Q9BTD8 480 aaKnown RBP12.48□□□□□ -0.41
PGM3-207ENST00000507554 OSCARQ8IYS5 282 aa12.41□□□□□ -0.42
PGM3-207ENST00000507554 SPDYE2BA6NHP3 402 aa12.32□□□□□ -0.44
PGM3-207ENST00000507554 SPDYE6P0CI01 402 aa12.32□□□□□ -0.44
PGM3-207ENST00000507554 SPDYE2Q495Y8 402 aa12.32□□□□□ -0.44
PGM3-207ENST00000507554 ABCC9O60706 1549 aa12.29□□□□□ -0.44
PGM3-207ENST00000507554 AKT1S1Q96B36 256 aa12.28□□□□□ -0.44
PGM3-207ENST00000507554 SSUH2Q9Y2M2 353 aa12.22□□□□□ -0.45
PGM3-207ENST00000507554 ZNF692Q9BU19 519 aaPredicted RBP12.18□□□□□ -0.46
PGM3-207ENST00000507554 REM2Q8IYK8 340 aaPredicted RBP12.13□□□□□ -0.47
PGM3-207ENST00000507554 SPDYE4A6NLX3 237 aa12.08□□□□□ -0.48
PGM3-207ENST00000507554 PABPN1Q86U42 306 aaKnown RBP eCLIP12.01□□□□□ -0.49
PGM3-207ENST00000507554 CHRDL2Q6WN34 429 aa12□□□□□ -0.49
PGM3-207ENST00000507554 PITPNM1O00562 1244 aa11.99□□□□□ -0.49
PGM3-207ENST00000507554 SPDYE1Q8NFV5 336 aaPredicted RBP11.97□□□□□ -0.49
PGM3-207ENST00000507554 PROM2Q8N271 834 aa11.96□□□□□ -0.49
PGM3-207ENST00000507554 FKBP8Q14318 412 aa11.87□□□□□ -0.51
PGM3-207ENST00000507554 FXR2P51116 673 aaKnown RBP eCLIP11.85□□□□□ -0.51
PGM3-207ENST00000507554 POTEHQ6S545 545 aa11.85□□□□□ -0.51
PGM3-207ENST00000507554 CLEC11AQ9Y240 323 aa11.85□□□□□ -0.51
PGM3-207ENST00000507554 STAG3Q9UJ98 1225 aa11.83□□□□□ -0.52
PGM3-207ENST00000507554 PIP4P2Q8N4L2 257 aa11.81□□□□□ -0.52
PGM3-207ENST00000507554 PRR29P0C7W0 189 aa11.76□□□□□ -0.53
PGM3-207ENST00000507554 PRKAR2AP13861 404 aaKnown RBP11.67□□□□□ -0.54
PGM3-207ENST00000507554 CREBZFQ9NS37 354 aa11.61□□□□□ -0.55
PGM3-207ENST00000507554 CCDC180Q9P1Z9 1646 aa11.6□□□□□ -0.55
PGM3-207ENST00000507554 CHADLQ6NUI6 762 aa11.6□□□□□ -0.55
PGM3-207ENST00000507554 DNAJC5Q9H3Z4 198 aa11.59□□□□□ -0.55
PGM3-207ENST00000507554 FBXO3Q9UK99 471 aa11.56□□□□□ -0.56
PGM3-207ENST00000507554 FARP1Q9Y4F1 1045 aaPredicted RBP11.53□□□□□ -0.56
PGM3-207ENST00000507554 MNX1P50219 401 aaPredicted RBP11.49□□□□□ -0.57
PGM3-207ENST00000507554 C19orf67A6NJJ6 358 aa11.45□□□□□ -0.58
PGM3-207ENST00000507554 MIER1Q8N108 512 aa11.44□□□□□ -0.58
PGM3-207ENST00000507554 HAX1O00165 279 aa11.43□□□□□ -0.58
PGM3-207ENST00000507554 PLEKHG5O94827 1062 aa11.42□□□□□ -0.58
PGM3-207ENST00000507554 NPM1P06748 294 aaKnown RBP eCLIP11.4□□□□□ -0.58
PGM3-207ENST00000507554 VASPP50552 380 aaPredicted RBP11.4□□□□□ -0.58
PGM3-207ENST00000507554 PLCD3Q8N3E9 789 aa11.4□□□□□ -0.58
PGM3-207ENST00000507554 ZBTB47Q9UFB7 747 aaPredicted RBP11.36□□□□□ -0.59
PGM3-207ENST00000507554 RB1CC1Q8TDY2 1594 aa11.36□□□□□ -0.59
PGM3-207ENST00000507554 EVX2Q03828 476 aa11.35□□□□□ -0.59
PGM3-207ENST00000507554 CD44P16070 742 aaKnown RBP11.33□□□□□ -0.6
PGM3-207ENST00000507554 SP7Q8TDD2 431 aaPredicted RBP11.32□□□□□ -0.6
PGM3-207ENST00000507554 UNC13AQ9UPW8 1703 aa11.27□□□□□ -0.61
PGM3-207ENST00000507554 NUBP1P53384 320 aa11.24□□□□□ -0.61
PGM3-207ENST00000507554 PAK3O75914 559 aaPredicted RBP11.23□□□□□ -0.61
PGM3-207ENST00000507554 IFNLR1Q8IU57 520 aaPredicted RBP11.23□□□□□ -0.61
PGM3-207ENST00000507554 ZNF579Q8NAF0 562 aaKnown RBP11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms