RNA–Protein interactions for RNA: ENST00000560023.1

SLC12A6-215, Transcript of solute carrier family 12 member 6, humanhuman

TSL 4

Gene SLC12A6, Length 550 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC12A6-215ENST00000560023 AEBP2Q6ZN18 517 aaPredicted RBP20.34■□□□□ 0.85
SLC12A6-215ENST00000560023 NISCHQ9Y2I1 1504 aa19.68■□□□□ 0.74
SLC12A6-215ENST00000560023 CHIC1Q5VXU3 224 aa19.5■□□□□ 0.71
SLC12A6-215ENST00000560023 ABCC9O60706 1549 aa18■□□□□ 0.47
SLC12A6-215ENST00000560023 CCDC180Q9P1Z9 1646 aa17.7■□□□□ 0.42
SLC12A6-215ENST00000560023 SENP3Q9H4L4 574 aaPredicted RBP17.28■□□□□ 0.36
SLC12A6-215ENST00000560023 PHF23Q9BUL5 403 aaPredicted RBP17.13■□□□□ 0.33
SLC12A6-215ENST00000560023 DNAJC5BQ9UF47 199 aa17.09■□□□□ 0.33
SLC12A6-215ENST00000560023 RB1CC1Q8TDY2 1594 aa17.02■□□□□ 0.32
SLC12A6-215ENST00000560023 NACADO15069 1562 aa16.85■□□□□ 0.29
SLC12A6-215ENST00000560023 DCAF8L2P0C7V8 631 aa16.85■□□□□ 0.29
SLC12A6-215ENST00000560023 PABPN1Q86U42 306 aaKnown RBP eCLIP16.77■□□□□ 0.28
SLC12A6-215ENST00000560023 MYO15BQ96JP2 1530 aa16.55■□□□□ 0.24
SLC12A6-215ENST00000560023 UNC13AQ9UPW8 1703 aa16.48■□□□□ 0.23
SLC12A6-215ENST00000560023 BICRAQ9NZM4 1560 aa16.47■□□□□ 0.23
SLC12A6-215ENST00000560023 SHROOM4Q9ULL8 1493 aa16.31■□□□□ 0.2
SLC12A6-215ENST00000560023 CECR2Q9BXF3 1484 aa16.25■□□□□ 0.19
SLC12A6-215ENST00000560023 DCAF1Q9Y4B6 1507 aa16.24■□□□□ 0.19
SLC12A6-215ENST00000560023 ZCCHC6Q5VYS8 1495 aaKnown RBP16.23■□□□□ 0.19
SLC12A6-215ENST00000560023 CC2D2AQ9P2K1 1620 aa16.21■□□□□ 0.19
SLC12A6-215ENST00000560023 SCRIBQ14160 1630 aa16.13■□□□□ 0.17
SLC12A6-215ENST00000560023 EIF4G1Q04637 1599 aaKnown RBP16.13■□□□□ 0.17
SLC12A6-215ENST00000560023 FOXD1Q16676 465 aa16.1■□□□□ 0.17
SLC12A6-215ENST00000560023 DNAJC5Q9H3Z4 198 aa15.92■□□□□ 0.14
SLC12A6-215ENST00000560023 PLPPR3Q6T4P5 718 aa15.66■□□□□ 0.1
SLC12A6-215ENST00000560023 CUX2O14529 1486 aa15.63■□□□□ 0.09
SLC12A6-215ENST00000560023 ERCC6Q03468 1493 aa15.61■□□□□ 0.09
SLC12A6-215ENST00000560023 NCAPD3P42695 1498 aa15.59■□□□□ 0.09
SLC12A6-215ENST00000560023 ATAD2BQ9ULI0 1458 aa15.49■□□□□ 0.07
SLC12A6-215ENST00000560023 SMARCA2P51531 1590 aa15.45■□□□□ 0.06
SLC12A6-215ENST00000560023 HMGXB3Q12766 1538 aa15.41■□□□□ 0.06
SLC12A6-215ENST00000560023 SMARCA4P51532 1647 aa15.37■□□□□ 0.05
SLC12A6-215ENST00000560023 NESP48681 1621 aa15.36■□□□□ 0.05
SLC12A6-215ENST00000560023 BAZ1BQ9UIG0 1483 aaKnown RBP15.34■□□□□ 0.05
SLC12A6-215ENST00000560023 BAZ1AQ9NRL2 1556 aaPredicted RBP15.3■□□□□ 0.04
SLC12A6-215ENST00000560023 LAMC3Q9Y6N6 1575 aa15.25■□□□□ 0.03
SLC12A6-215ENST00000560023 PDS5BQ9NTI5 1447 aa15.24■□□□□ 0.03
SLC12A6-215ENST00000560023 PPP6R1Q9UPN7 881 aa15.22■□□□□ 0.03
SLC12A6-215ENST00000560023 PEG3Q9GZU2 1588 aa15.22■□□□□ 0.03
SLC12A6-215ENST00000560023 THOC2Q8NI27 1593 aaKnown RBP15.21■□□□□ 0.03
SLC12A6-215ENST00000560023 ADRA2BP18089 450 aa15.17■□□□□ 0.02
SLC12A6-215ENST00000560023 TRIM41Q8WV44 630 aa15.15■□□□□ 0.02
SLC12A6-215ENST00000560023 MROH2BQ7Z745 1585 aa15.15■□□□□ 0.02
SLC12A6-215ENST00000560023 CADPSQ9ULU8 1353 aa15.12■□□□□ 0.01
SLC12A6-215ENST00000560023 KIF21AQ7Z4S6 1674 aa15.09■□□□□ 0.01
SLC12A6-215ENST00000560023 PIAS4Q8N2W9 510 aaPredicted RBP15.08■□□□□ 0
SLC12A6-215ENST00000560023 MRC2Q9UBG0 1479 aa15.07■□□□□ 0
SLC12A6-215ENST00000560023 WDR62O43379 1518 aa15□□□□□ -0.01
SLC12A6-215ENST00000560023 CEP164Q9UPV0 1460 aa14.97□□□□□ -0.01
SLC12A6-215ENST00000560023 MSH5O43196 834 aa14.96□□□□□ -0.01
SLC12A6-215ENST00000560023 OSCARQ8IYS5 282 aa14.96□□□□□ -0.01
SLC12A6-215ENST00000560023 FANCD2Q9BXW9 1451 aa14.93□□□□□ -0.02
SLC12A6-215ENST00000560023 WIZO95785 1651 aa14.91□□□□□ -0.02
SLC12A6-215ENST00000560023 CFTRP13569 1480 aa14.88□□□□□ -0.03
SLC12A6-215ENST00000560023 URB2Q14146 1524 aaKnown RBP14.78□□□□□ -0.04
SLC12A6-215ENST00000560023 RSF1Q96T23 1441 aaPredicted RBP14.78□□□□□ -0.04
SLC12A6-215ENST00000560023 TOP2AP11388 1531 aaKnown RBP14.75□□□□□ -0.05
SLC12A6-215ENST00000560023 IFT140Q96RY7 1462 aa14.69□□□□□ -0.06
SLC12A6-215ENST00000560023 RIMBP3CA6NJZ7 1639 aa14.64□□□□□ -0.07
SLC12A6-215ENST00000560023 RIMBP3BA6NNM3 1639 aa14.64□□□□□ -0.07
SLC12A6-215ENST00000560023 RIMBP3Q9UFD9 1639 aa14.64□□□□□ -0.07
SLC12A6-215ENST00000560023 ZNF608Q9ULD9 1512 aaPredicted RBP14.64□□□□□ -0.07
SLC12A6-215ENST00000560023 CYB5RLQ6IPT4 315 aa14.61□□□□□ -0.07
SLC12A6-215ENST00000560023 CCDC88BA6NC98 1476 aa14.61□□□□□ -0.07
SLC12A6-215ENST00000560023 ARHGEF11O15085 1522 aa14.61□□□□□ -0.07
SLC12A6-215ENST00000560023 ABCC8Q09428 1581 aa14.6□□□□□ -0.07
SLC12A6-215ENST00000560023 TOPBP1Q92547 1522 aa14.6□□□□□ -0.07
SLC12A6-215ENST00000560023 PRDM2Q13029 1718 aa14.56□□□□□ -0.08
SLC12A6-215ENST00000560023 TRHP20396 242 aaPredicted RBP14.56□□□□□ -0.08
SLC12A6-215ENST00000560023 FBLN2P98095 1184 aa14.56□□□□□ -0.08
SLC12A6-215ENST00000560023 EIF4G3O43432 1585 aaKnown RBP14.51□□□□□ -0.09
SLC12A6-215ENST00000560023 DNMBPQ6XZF7 1577 aa14.51□□□□□ -0.09
SLC12A6-215ENST00000560023 AQRO60306 1485 aaKnown RBP eCLIP14.51□□□□□ -0.09
SLC12A6-215ENST00000560023 TARBP1Q13395 1621 aaKnown RBP14.44□□□□□ -0.1
SLC12A6-215ENST00000560023 POLA1P09884 1462 aaPredicted RBP14.44□□□□□ -0.1
SLC12A6-215ENST00000560023 ARAP1Q96P48 1450 aa14.44□□□□□ -0.1
SLC12A6-215ENST00000560023 SOGA1O94964 1423 aa14.42□□□□□ -0.1
SLC12A6-215ENST00000560023 CHMP7Q8WUX9 453 aaPredicted RBP14.41□□□□□ -0.1
SLC12A6-215ENST00000560023 TDRD9Q8NDG6 1382 aaKnown RBP14.41□□□□□ -0.1
SLC12A6-215ENST00000560023 CHD1O14646 1710 aa14.41□□□□□ -0.1
SLC12A6-215ENST00000560023 RAD54L2Q9Y4B4 1467 aa14.38□□□□□ -0.11
SLC12A6-215ENST00000560023 SNAPC4Q5SXM2 1469 aa14.34□□□□□ -0.11
SLC12A6-215ENST00000560023 FGD5Q6ZNL6 1462 aa14.31□□□□□ -0.12
SLC12A6-215ENST00000560023 MAGI1Q96QZ7 1491 aaPredicted RBP14.31□□□□□ -0.12
SLC12A6-215ENST00000560023 WDR97A6NE52 1622 aa14.31□□□□□ -0.12
SLC12A6-215ENST00000560023 GRIN2BQ13224 1484 aa14.31□□□□□ -0.12
SLC12A6-215ENST00000560023 SYNJ1O43426 1573 aa14.3□□□□□ -0.12
SLC12A6-215ENST00000560023 CLASP1Q7Z460 1538 aa14.29□□□□□ -0.12
SLC12A6-215ENST00000560023 SYNJ2O15056 1496 aa14.27□□□□□ -0.12
SLC12A6-215ENST00000560023 POTEDQ86YR6 584 aa14.27□□□□□ -0.13
SLC12A6-215ENST00000560023 CUX1P39880 1505 aa14.24□□□□□ -0.13
SLC12A6-215ENST00000560023 GAPVD1Q14C86 1478 aa14.22□□□□□ -0.13
SLC12A6-215ENST00000560023 ABCA10Q8WWZ4 1543 aa14.15□□□□□ -0.14
SLC12A6-215ENST00000560023 PBRM1Q86U86 1689 aa14.11□□□□□ -0.15
SLC12A6-215ENST00000560023 EHMT2Q96KQ7 1210 aa14.11□□□□□ -0.15
SLC12A6-215ENST00000560023 WRNQ14191 1432 aaPredicted RBP eCLIP14.1□□□□□ -0.15
SLC12A6-215ENST00000560023 GRIN2AQ12879 1464 aa14.1□□□□□ -0.15
SLC12A6-215ENST00000560023 ABCA5Q8WWZ7 1642 aa14.08□□□□□ -0.15
SLC12A6-215ENST00000560023 NUP160Q12769 1436 aa14.06□□□□□ -0.16
SLC12A6-215ENST00000560023 FHAD1B1AJZ9 1412 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms