RNA–Protein interactions for RNA: ENST00000507469.5

SMG7-212, Transcript of SMG7, nonsense mediated mRNA decay factor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMG7, Length 4,642 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG7-212ENST00000507469 NISCHQ9Y2I1 1504 aa22.4■■□□□ 1.18
SMG7-212ENST00000507469 DCAF8L2P0C7V8 631 aa20.33■□□□□ 0.84
SMG7-212ENST00000507469 SHROOM4Q9ULL8 1493 aa20.16■□□□□ 0.82
SMG7-212ENST00000507469 SUPT5HO00267 1087 aaKnown RBP20.1■□□□□ 0.81
SMG7-212ENST00000507469 PCGF6Q9BYE7 350 aa18.94■□□□□ 0.62
SMG7-212ENST00000507469 CHIC1Q5VXU3 224 aa18.89■□□□□ 0.61
SMG7-212ENST00000507469 EHMT2Q96KQ7 1210 aa18.81■□□□□ 0.6
SMG7-212ENST00000507469 ZCCHC6Q5VYS8 1495 aaKnown RBP18.79■□□□□ 0.6
SMG7-212ENST00000507469 FAM9AQ8IZU1 332 aaPredicted RBP18.72■□□□□ 0.59
SMG7-212ENST00000507469 TRIM41Q8WV44 630 aa18.66■□□□□ 0.58
SMG7-212ENST00000507469 CCDC180Q9P1Z9 1646 aa18.65■□□□□ 0.58
SMG7-212ENST00000507469 HRCP23327 699 aa18.56■□□□□ 0.56
SMG7-212ENST00000507469 LOC105371045A0A1W2PR82 267 aa18.56■□□□□ 0.56
SMG7-212ENST00000507469 TRIM26Q12899 539 aaPredicted RBP18.38■□□□□ 0.53
SMG7-212ENST00000507469 ZEB1P37275 1124 aaPredicted RBP18.31■□□□□ 0.52
SMG7-212ENST00000507469 PPARGC1BQ86YN6 1023 aaKnown RBP18.2■□□□□ 0.5
SMG7-212ENST00000507469 TTBK1Q5TCY1 1321 aaPredicted RBP18.2■□□□□ 0.5
SMG7-212ENST00000507469 MYO15BQ96JP2 1530 aa18.19■□□□□ 0.5
SMG7-212ENST00000507469 ABCC9O60706 1549 aa18.18■□□□□ 0.5
SMG7-212ENST00000507469 CCER1Q8TC90 406 aaPredicted RBP18.07■□□□□ 0.48
SMG7-212ENST00000507469 SCRIBQ14160 1630 aa18.07■□□□□ 0.48
SMG7-212ENST00000507469 DCAF1Q9Y4B6 1507 aa18.05■□□□□ 0.48
SMG7-212ENST00000507469 APLP2Q06481 763 aa18.04■□□□□ 0.48
SMG7-212ENST00000507469 UBTFP17480 764 aaKnown RBP18.03■□□□□ 0.48
SMG7-212ENST00000507469 RANGAP1P46060 587 aaPredicted RBP17.88■□□□□ 0.45
SMG7-212ENST00000507469 RSF1Q96T23 1441 aaPredicted RBP17.88■□□□□ 0.45
SMG7-212ENST00000507469 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.73■□□□□ 0.43
SMG7-212ENST00000507469 PABPN1Q86U42 306 aaKnown RBP eCLIP17.73■□□□□ 0.43
SMG7-212ENST00000507469 CENPBP07199 599 aaPredicted RBP17.71■□□□□ 0.43
SMG7-212ENST00000507469 NACADO15069 1562 aa17.62■□□□□ 0.41
SMG7-212ENST00000507469 RB1CC1Q8TDY2 1594 aa17.59■□□□□ 0.41
SMG7-212ENST00000507469 HNRNPUL2Q1KMD3 747 aaKnown RBP17.55■□□□□ 0.4
SMG7-212ENST00000507469 CECR2Q9BXF3 1484 aa17.55■□□□□ 0.4
SMG7-212ENST00000507469 CSRNP3Q8WYN3 585 aa17.53■□□□□ 0.4
SMG7-212ENST00000507469 PELP1Q8IZL8 1130 aaKnown RBP17.47■□□□□ 0.39
SMG7-212ENST00000507469 YTHDC1Q96MU7 727 aaKnown RBP17.46■□□□□ 0.39
SMG7-212ENST00000507469 DIEXFQ68CQ4 756 aaKnown RBP17.46■□□□□ 0.39
SMG7-212ENST00000507469 ATP1B4Q9UN42 357 aaPredicted RBP17.41■□□□□ 0.38
SMG7-212ENST00000507469 MROH2BQ7Z745 1585 aa17.41■□□□□ 0.38
SMG7-212ENST00000507469 BAZ1AQ9NRL2 1556 aaPredicted RBP17.35■□□□□ 0.37
SMG7-212ENST00000507469 ITGAEP38570 1179 aa17.3■□□□□ 0.36
SMG7-212ENST00000507469 WIZO95785 1651 aa17.23■□□□□ 0.35
SMG7-212ENST00000507469 CEP162Q5TB80 1403 aa17.23■□□□□ 0.35
SMG7-212ENST00000507469 ZNF316A6NFI3 1004 aaPredicted RBP17.21■□□□□ 0.35
SMG7-212ENST00000507469 EEA1Q15075 1411 aa17.2■□□□□ 0.34
SMG7-212ENST00000507469 TNIKQ9UKE5 1360 aa17.16■□□□□ 0.34
SMG7-212ENST00000507469 ACIN1Q9UKV3 1341 aaKnown RBP17.14■□□□□ 0.34
SMG7-212ENST00000507469 CCDC88BA6NC98 1476 aa17.14■□□□□ 0.33
SMG7-212ENST00000507469 WRNQ14191 1432 aaPredicted RBP eCLIP17.14■□□□□ 0.33
SMG7-212ENST00000507469 GTF3C3Q9Y5Q9 886 aa17.12■□□□□ 0.33
SMG7-212ENST00000507469 GOLGA3Q08378 1498 aa17.12■□□□□ 0.33
SMG7-212ENST00000507469 SOGA1O94964 1423 aa17.12■□□□□ 0.33
SMG7-212ENST00000507469 ABCC8Q09428 1581 aa17.11■□□□□ 0.33
SMG7-212ENST00000507469 CLIP1P30622 1438 aa17.08■□□□□ 0.32
SMG7-212ENST00000507469 TOP2AP11388 1531 aaKnown RBP17.06■□□□□ 0.32
SMG7-212ENST00000507469 SCAF1Q9H7N4 1312 aaKnown RBP17.03■□□□□ 0.32
SMG7-212ENST00000507469 BAZ1BQ9UIG0 1483 aaKnown RBP17.01■□□□□ 0.31
SMG7-212ENST00000507469 FAM50AQ14320 339 aaKnown RBP17■□□□□ 0.31
SMG7-212ENST00000507469 CEP164Q9UPV0 1460 aa16.99■□□□□ 0.31
SMG7-212ENST00000507469 NEUROD1Q13562 356 aa16.98■□□□□ 0.31
SMG7-212ENST00000507469 SMARCA4P51532 1647 aa16.95■□□□□ 0.3
SMG7-212ENST00000507469 NEFLP07196 543 aa16.89■□□□□ 0.29
SMG7-212ENST00000507469 P3H3Q8IVL6 736 aa16.89■□□□□ 0.29
SMG7-212ENST00000507469 SMARCA2P51531 1590 aa16.83■□□□□ 0.28
SMG7-212ENST00000507469 RUSC2Q8N2Y8 1516 aa16.83■□□□□ 0.28
SMG7-212ENST00000507469 MIER1Q8N108 512 aa16.82■□□□□ 0.28
SMG7-212ENST00000507469 MYT1Q01538 1121 aa16.78■□□□□ 0.28
SMG7-212ENST00000507469 VPS8Q8N3P4 1428 aa16.77■□□□□ 0.28
SMG7-212ENST00000507469 KIF27Q86VH2 1401 aa16.77■□□□□ 0.27
SMG7-212ENST00000507469 ATAD2BQ9ULI0 1458 aa16.72■□□□□ 0.27
SMG7-212ENST00000507469 TRIM52Q96A61 297 aa16.66■□□□□ 0.26
SMG7-212ENST00000507469 RAPGEF2Q9Y4G8 1499 aa16.65■□□□□ 0.26
SMG7-212ENST00000507469 ANP32CO43423 234 aa16.63■□□□□ 0.25
SMG7-212ENST00000507469 CLSPNQ9HAW4 1339 aa16.62■□□□□ 0.25
SMG7-212ENST00000507469 KANK4Q5T7N3 995 aaPredicted RBP16.61■□□□□ 0.25
SMG7-212ENST00000507469 DDX10Q13206 875 aaKnown RBP16.57■□□□□ 0.24
SMG7-212ENST00000507469 BCANQ96GW7 911 aa16.56■□□□□ 0.24
SMG7-212ENST00000507469 CCNB3Q8WWL7 1395 aa16.56■□□□□ 0.24
SMG7-212ENST00000507469 ERICH6Q7L0X2 663 aa16.56■□□□□ 0.24
SMG7-212ENST00000507469 POLR3GLQ9BT43 218 aa16.55■□□□□ 0.24
SMG7-212ENST00000507469 CUX2O14529 1486 aa16.54■□□□□ 0.24
SMG7-212ENST00000507469 ARID3CA6NKF2 412 aa16.53■□□□□ 0.24
SMG7-212ENST00000507469 CARMIL1Q5VZK9 1371 aa16.52■□□□□ 0.23
SMG7-212ENST00000507469 TONSLQ96HA7 1378 aa16.52■□□□□ 0.23
SMG7-212ENST00000507469 MTUS2Q5JR59 1369 aa16.49■□□□□ 0.23
SMG7-212ENST00000507469 CNGB1Q14028 1251 aaPredicted RBP16.49■□□□□ 0.23
SMG7-212ENST00000507469 SYNJ1O43426 1573 aa16.48■□□□□ 0.23
SMG7-212ENST00000507469 KIF21BO75037 1637 aa16.45■□□□□ 0.22
SMG7-212ENST00000507469 HIRIP3Q9BW71 556 aaPredicted RBP16.44■□□□□ 0.22
SMG7-212ENST00000507469 FHAD1B1AJZ9 1412 aa16.42■□□□□ 0.22
SMG7-212ENST00000507469 SIN3AQ96ST3 1273 aa16.42■□□□□ 0.22
SMG7-212ENST00000507469 CHIC2Q9UKJ5 165 aa16.42■□□□□ 0.22
SMG7-212ENST00000507469 FKBP8Q14318 412 aa16.38■□□□□ 0.21
SMG7-212ENST00000507469 DHX57Q6P158 1386 aaKnown RBP16.38■□□□□ 0.21
SMG7-212ENST00000507469 BICRAQ9NZM4 1560 aa16.38■□□□□ 0.21
SMG7-212ENST00000507469 EIF4G1Q04637 1599 aaKnown RBP16.37■□□□□ 0.21
SMG7-212ENST00000507469 FBLN2P98095 1184 aa16.37■□□□□ 0.21
SMG7-212ENST00000507469 CADPSQ9ULU8 1353 aa16.37■□□□□ 0.21
SMG7-212ENST00000507469 RAB3GAP2Q9H2M9 1393 aa16.36■□□□□ 0.21
SMG7-212ENST00000507469 SETD5Q9C0A6 1442 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms