RNA–Protein interactions for RNA: ENST00000568133.5

MVD-215, Transcript of mevalonate diphosphate decarboxylase, human

TSL 3

Gene MVD, Length 853 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MVD-215	ENST00000568133	NISCH	Q9Y2I1	1504 aa		40.12	■■■■■ 4.01
MVD-215	ENST00000568133	CCDC180	Q9P1Z9	1646 aa		35.75	■■■■□ 3.31
MVD-215	ENST00000568133	ABCC9	O60706	1549 aa		34.98	■■■■□ 3.19
MVD-215	ENST00000568133	RB1CC1	Q8TDY2	1594 aa		33.65	■■■□□ 2.98
MVD-215	ENST00000568133	NACAD	O15069	1562 aa		33.59	■■■□□ 2.97
MVD-215	ENST00000568133	DCAF8L2	P0C7V8	631 aa		33.5	■■■□□ 2.95
MVD-215	ENST00000568133	ZCCHC6	Q5VYS8	1495 aa	Known RBP	33.44	■■■□□ 2.94
MVD-215	ENST00000568133	MYO15B	Q96JP2	1530 aa		33.37	■■■□□ 2.93
MVD-215	ENST00000568133	DCAF1	Q9Y4B6	1507 aa		33.21	■■■□□ 2.91
MVD-215	ENST00000568133	UNC13A	Q9UPW8	1703 aa		32.89	■■■□□ 2.86
MVD-215	ENST00000568133	PABPN1	Q86U42	306 aa	Known RBP eCLIP	32.63	■■■□□ 2.81	1e-8	■■□□□ 11.4
MVD-215	ENST00000568133	SCRIB	Q14160	1630 aa		32.61	■■■□□ 2.81
MVD-215	ENST00000568133	BICRA	Q9NZM4	1560 aa		32.61	■■■□□ 2.81
MVD-215	ENST00000568133	SHROOM4	Q9ULL8	1493 aa		32.31	■■■□□ 2.76
MVD-215	ENST00000568133	DNAJC5B	Q9UF47	199 aa		32.07	■■■□□ 2.72
MVD-215	ENST00000568133	EIF4G1	Q04637	1599 aa	Known RBP	31.77	■■■□□ 2.68
MVD-215	ENST00000568133	CC2D2A	Q9P2K1	1620 aa		31.65	■■■□□ 2.66
MVD-215	ENST00000568133	CECR2	Q9BXF3	1484 aa		31.44	■■■□□ 2.62
MVD-215	ENST00000568133	SMARCA4	P51532	1647 aa		31.17	■■■□□ 2.58
MVD-215	ENST00000568133	BAZ1A	Q9NRL2	1556 aa	Predicted RBP	31.13	■■■□□ 2.57
MVD-215	ENST00000568133	ATAD2B	Q9ULI0	1458 aa		30.98	■■■□□ 2.55
MVD-215	ENST00000568133	SMARCA2	P51531	1590 aa		30.97	■■■□□ 2.55
MVD-215	ENST00000568133	NCAPD3	P42695	1498 aa		30.96	■■■□□ 2.55
MVD-215	ENST00000568133	MROH2B	Q7Z745	1585 aa		30.92	■■■□□ 2.54
MVD-215	ENST00000568133	PEG3	Q9GZU2	1588 aa		30.87	■■■□□ 2.53
MVD-215	ENST00000568133	HMGXB3	Q12766	1538 aa		30.86	■■■□□ 2.53
MVD-215	ENST00000568133	BAZ1B	Q9UIG0	1483 aa	Known RBP	30.76	■■■□□ 2.51
MVD-215	ENST00000568133	WIZ	O95785	1651 aa		30.61	■■■□□ 2.49
MVD-215	ENST00000568133	RSF1	Q96T23	1441 aa	Predicted RBP	30.53	■■■□□ 2.48
MVD-215	ENST00000568133	TOP2A	P11388	1531 aa	Known RBP	30.29	■■■□□ 2.44
MVD-215	ENST00000568133	NES	P48681	1621 aa		30.25	■■■□□ 2.43
MVD-215	ENST00000568133	LAMC3	Q9Y6N6	1575 aa		30.2	■■■□□ 2.42
MVD-215	ENST00000568133	ERCC6	Q03468	1493 aa		30.19	■■■□□ 2.42
MVD-215	ENST00000568133	CADPS	Q9ULU8	1353 aa		30.05	■■■□□ 2.4
MVD-215	ENST00000568133	PDS5B	Q9NTI5	1447 aa		29.97	■■■□□ 2.39
MVD-215	ENST00000568133	KIF21A	Q7Z4S6	1674 aa		29.93	■■■□□ 2.38
MVD-215	ENST00000568133	CCDC88B	A6NC98	1476 aa		29.89	■■■□□ 2.38
MVD-215	ENST00000568133	CFTR	P13569	1480 aa		29.88	■■■□□ 2.37
MVD-215	ENST00000568133	CUX2	O14529	1486 aa		29.87	■■■□□ 2.37
MVD-215	ENST00000568133	THOC2	Q8NI27	1593 aa	Known RBP	29.85	■■■□□ 2.37
MVD-215	ENST00000568133	FANCD2	Q9BXW9	1451 aa		29.74	■■■□□ 2.35
MVD-215	ENST00000568133	CEP164	Q9UPV0	1460 aa		29.73	■■■□□ 2.35
MVD-215	ENST00000568133	PRDM2	Q13029	1718 aa		29.71	■■■□□ 2.35
MVD-215	ENST00000568133	SUPT5H	O00267	1087 aa	Known RBP	29.7	■■■□□ 2.35
MVD-215	ENST00000568133	MRC2	Q9UBG0	1479 aa		29.68	■■■□□ 2.34
MVD-215	ENST00000568133	WDR62	O43379	1518 aa		29.61	■■■□□ 2.33
MVD-215	ENST00000568133	URB2	Q14146	1524 aa	Known RBP	29.44	■■■□□ 2.3
MVD-215	ENST00000568133	TOPBP1	Q92547	1522 aa		29.26	■■■□□ 2.27
MVD-215	ENST00000568133	ABCC8	Q09428	1581 aa		29.26	■■■□□ 2.27
MVD-215	ENST00000568133	DNMBP	Q6XZF7	1577 aa		29.24	■■■□□ 2.27
MVD-215	ENST00000568133	IFT140	Q96RY7	1462 aa		29.1	■■■□□ 2.25
MVD-215	ENST00000568133	CUX1	P39880	1505 aa		29.01	■■■□□ 2.23
MVD-215	ENST00000568133	POLA1	P09884	1462 aa	Predicted RBP	29.01	■■■□□ 2.23
MVD-215	ENST00000568133	ZNF608	Q9ULD9	1512 aa	Predicted RBP	28.95	■■■□□ 2.23
MVD-215	ENST00000568133	TARBP1	Q13395	1621 aa	Known RBP	28.95	■■■□□ 2.23
MVD-215	ENST00000568133	FGD5	Q6ZNL6	1462 aa		28.94	■■■□□ 2.22
MVD-215	ENST00000568133	DNAJC5	Q9H3Z4	198 aa		28.94	■■■□□ 2.22
MVD-215	ENST00000568133	EIF4G3	O43432	1585 aa	Known RBP	28.89	■■■□□ 2.22
MVD-215	ENST00000568133	SOGA1	O94964	1423 aa		28.86	■■■□□ 2.21
MVD-215	ENST00000568133	RAD54L2	Q9Y4B4	1467 aa		28.86	■■■□□ 2.21
MVD-215	ENST00000568133	WRN	Q14191	1432 aa	Predicted RBP eCLIP	28.81	■■■□□ 2.2
MVD-215	ENST00000568133	BIVM-ERCC5	R4GMW8	1640 aa		28.79	■■■□□ 2.2
MVD-215	ENST00000568133	TOP2B	Q02880	1626 aa		28.78	■■■□□ 2.2
MVD-215	ENST00000568133	AQR	O60306	1485 aa	Known RBP eCLIP	28.77	■■■□□ 2.2	9e-11	■■■■□ 23.2
MVD-215	ENST00000568133	SYNJ1	O43426	1573 aa		28.76	■■■□□ 2.19
MVD-215	ENST00000568133	WDR97	A6NE52	1622 aa		28.76	■■■□□ 2.19
MVD-215	ENST00000568133	TDRD9	Q8NDG6	1382 aa	Known RBP	28.71	■■■□□ 2.19
MVD-215	ENST00000568133	ABCA10	Q8WWZ4	1543 aa		28.64	■■■□□ 2.18
MVD-215	ENST00000568133	OSCAR	Q8IYS5	282 aa		28.57	■■■□□ 2.16
MVD-215	ENST00000568133	ABCA5	Q8WWZ7	1642 aa		28.57	■■■□□ 2.16
MVD-215	ENST00000568133	GRIN2B	Q13224	1484 aa		28.56	■■■□□ 2.16
MVD-215	ENST00000568133	GAPVD1	Q14C86	1478 aa		28.55	■■■□□ 2.16
MVD-215	ENST00000568133	PBRM1	Q86U86	1689 aa		28.54	■■■□□ 2.16
MVD-215	ENST00000568133	SNAPC4	Q5SXM2	1469 aa		28.54	■■■□□ 2.16
MVD-215	ENST00000568133	CHD1	O14646	1710 aa		28.52	■■■□□ 2.16
MVD-215	ENST00000568133	MAGI1	Q96QZ7	1491 aa	Predicted RBP	28.5	■■■□□ 2.15
MVD-215	ENST00000568133	FBLN2	P98095	1184 aa		28.43	■■■□□ 2.14
MVD-215	ENST00000568133	SYNJ2	O15056	1496 aa		28.39	■■■□□ 2.13
MVD-215	ENST00000568133	CHMP7	Q8WUX9	453 aa	Predicted RBP	28.35	■■■□□ 2.13
MVD-215	ENST00000568133	ERICH3	Q5RHP9	1530 aa		28.32	■■■□□ 2.12
MVD-215	ENST00000568133	ADAMTS12	P58397	1594 aa		28.31	■■■□□ 2.12
MVD-215	ENST00000568133	FHAD1	B1AJZ9	1412 aa		28.22	■■■□□ 2.11
MVD-215	ENST00000568133	KIF27	Q86VH2	1401 aa		28.21	■■■□□ 2.11
MVD-215	ENST00000568133	CLASP1	Q7Z460	1538 aa		28.2	■■■□□ 2.1
MVD-215	ENST00000568133	GRIN2A	Q12879	1464 aa		28.2	■■■□□ 2.1
MVD-215	ENST00000568133	RIMBP3C	A6NJZ7	1639 aa		28.18	■■■□□ 2.1
MVD-215	ENST00000568133	RIMBP3B	A6NNM3	1639 aa		28.18	■■■□□ 2.1
MVD-215	ENST00000568133	RIMBP3	Q9UFD9	1639 aa		28.18	■■■□□ 2.1
MVD-215	ENST00000568133	ARHGEF11	O15085	1522 aa		28.16	■■■□□ 2.1
MVD-215	ENST00000568133	CUL7	Q14999	1698 aa		28.08	■■■□□ 2.09
MVD-215	ENST00000568133	CEP170	Q5SW79	1584 aa		28.07	■■■□□ 2.08
MVD-215	ENST00000568133	TRIM41	Q8WV44	630 aa		28.06	■■■□□ 2.08
MVD-215	ENST00000568133	IGF1R	P08069	1367 aa		28.06	■■■□□ 2.08
MVD-215	ENST00000568133	NUP160	Q12769	1436 aa		28.06	■■■□□ 2.08
MVD-215	ENST00000568133	ARAP1	Q96P48	1450 aa		27.93	■■■□□ 2.06
MVD-215	ENST00000568133	RUSC2	Q8N2Y8	1516 aa		27.92	■■■□□ 2.06
MVD-215	ENST00000568133	CARMIL1	Q5VZK9	1371 aa		27.91	■■■□□ 2.06
MVD-215	ENST00000568133	SHROOM2	Q13796	1616 aa		27.88	■■■□□ 2.05
MVD-215	ENST00000568133	CYB5RL	Q6IPT4	315 aa		27.85	■■■□□ 2.05
MVD-215	ENST00000568133	ERCC6L2	Q5T890	1561 aa		27.79	■■■□□ 2.04

Retrieved 100 of 20,778 RNA–protein pairs in 64 ms