RNA–Protein interactions for RNA: ENST00000440812.7

SMG7-205, Transcript of SMG7, nonsense mediated mRNA decay factor, humanhuman

TSL 5

Gene SMG7, Length 1,190 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG7-205ENST00000440812 NISCHQ9Y2I1 1504 aa52.53■■■■■ 6
SMG7-205ENST00000440812 CCDC180Q9P1Z9 1646 aa47.21■■■■■ 5.15
SMG7-205ENST00000440812 ABCC9O60706 1549 aa47.07■■■■■ 5.13
SMG7-205ENST00000440812 RB1CC1Q8TDY2 1594 aa44.8■■■■■ 4.76
SMG7-205ENST00000440812 NACADO15069 1562 aa44.48■■■■■ 4.71
SMG7-205ENST00000440812 DCAF8L2P0C7V8 631 aa44.26■■■■■ 4.68
SMG7-205ENST00000440812 UNC13AQ9UPW8 1703 aa44.18■■■■■ 4.66
SMG7-205ENST00000440812 DNAJC5BQ9UF47 199 aa44.04■■■■■ 4.64
SMG7-205ENST00000440812 MYO15BQ96JP2 1530 aa43.79■■■■■ 4.6
SMG7-205ENST00000440812 PABPN1Q86U42 306 aaKnown RBP eCLIP43.79■■■■■ 4.6
SMG7-205ENST00000440812 BICRAQ9NZM4 1560 aa43.6■■■■■ 4.57
SMG7-205ENST00000440812 ZCCHC6Q5VYS8 1495 aaKnown RBP43.57■■■■■ 4.56
SMG7-205ENST00000440812 DCAF1Q9Y4B6 1507 aa43.32■■■■■ 4.52
SMG7-205ENST00000440812 SCRIBQ14160 1630 aa43.08■■■■■ 4.49
SMG7-205ENST00000440812 SHROOM4Q9ULL8 1493 aa42.75■■■■■ 4.43
SMG7-205ENST00000440812 CC2D2AQ9P2K1 1620 aa42.58■■■■■ 4.41
SMG7-205ENST00000440812 EIF4G1Q04637 1599 aaKnown RBP42.47■■■■■ 4.39
SMG7-205ENST00000440812 CECR2Q9BXF3 1484 aa42.32■■■■■ 4.37
SMG7-205ENST00000440812 SMARCA4P51532 1647 aa41.06■■■■■ 4.16
SMG7-205ENST00000440812 NCAPD3P42695 1498 aa40.99■■■■■ 4.15
SMG7-205ENST00000440812 ATAD2BQ9ULI0 1458 aa40.95■■■■■ 4.15
SMG7-205ENST00000440812 SMARCA2P51531 1590 aa40.83■■■■■ 4.13
SMG7-205ENST00000440812 HMGXB3Q12766 1538 aa40.77■■■■■ 4.12
SMG7-205ENST00000440812 BAZ1AQ9NRL2 1556 aaPredicted RBP40.76■■■■■ 4.12
SMG7-205ENST00000440812 BAZ1BQ9UIG0 1483 aaKnown RBP40.57■■■■■ 4.08
SMG7-205ENST00000440812 PEG3Q9GZU2 1588 aa40.57■■■■■ 4.08
SMG7-205ENST00000440812 ERCC6Q03468 1493 aa40.55■■■■■ 4.08
SMG7-205ENST00000440812 MROH2BQ7Z745 1585 aa40.55■■■■■ 4.08
SMG7-205ENST00000440812 NESP48681 1621 aa40.52■■■■■ 4.08
SMG7-205ENST00000440812 CUX2O14529 1486 aa40.4■■■■■ 4.06
SMG7-205ENST00000440812 DNAJC5Q9H3Z4 198 aa40.24■■■■■ 4.03
SMG7-205ENST00000440812 WIZO95785 1651 aa40.19■■■■■ 4.02
SMG7-205ENST00000440812 LAMC3Q9Y6N6 1575 aa40.16■■■■■ 4.02
SMG7-205ENST00000440812 KIF21AQ7Z4S6 1674 aa40.15■■■■■ 4.02
SMG7-205ENST00000440812 THOC2Q8NI27 1593 aaKnown RBP40.11■■■■■ 4.01
SMG7-205ENST00000440812 PDS5BQ9NTI5 1447 aa39.79■■■■□ 3.96
SMG7-205ENST00000440812 CADPSQ9ULU8 1353 aa39.74■■■■□ 3.95
SMG7-205ENST00000440812 RSF1Q96T23 1441 aaPredicted RBP39.65■■■■□ 3.94
SMG7-205ENST00000440812 MRC2Q9UBG0 1479 aa39.54■■■■□ 3.92
SMG7-205ENST00000440812 TOP2AP11388 1531 aaKnown RBP39.53■■■■□ 3.92
SMG7-205ENST00000440812 WDR62O43379 1518 aa39.49■■■■□ 3.91
SMG7-205ENST00000440812 CEP164Q9UPV0 1460 aa39.41■■■■□ 3.9
SMG7-205ENST00000440812 FANCD2Q9BXW9 1451 aa39.37■■■■□ 3.89
SMG7-205ENST00000440812 CFTRP13569 1480 aa39.36■■■■□ 3.89
SMG7-205ENST00000440812 PRDM2Q13029 1718 aa39.33■■■■□ 3.89
SMG7-205ENST00000440812 URB2Q14146 1524 aaKnown RBP39.11■■■■□ 3.85
SMG7-205ENST00000440812 CCDC88BA6NC98 1476 aa39.06■■■■□ 3.84
SMG7-205ENST00000440812 TOPBP1Q92547 1522 aa38.68■■■■□ 3.78
SMG7-205ENST00000440812 ZNF608Q9ULD9 1512 aaPredicted RBP38.63■■■■□ 3.77
SMG7-205ENST00000440812 TRIM41Q8WV44 630 aa38.62■■■■□ 3.77
SMG7-205ENST00000440812 IFT140Q96RY7 1462 aa38.57■■■■□ 3.76
SMG7-205ENST00000440812 DNMBPQ6XZF7 1577 aa38.56■■■■□ 3.76
SMG7-205ENST00000440812 OSCARQ8IYS5 282 aa38.51■■■■□ 3.76
SMG7-205ENST00000440812 EIF4G3O43432 1585 aaKnown RBP38.48■■■■□ 3.75
SMG7-205ENST00000440812 ABCC8Q09428 1581 aa38.46■■■■□ 3.75
SMG7-205ENST00000440812 TARBP1Q13395 1621 aaKnown RBP38.41■■■■□ 3.74
SMG7-205ENST00000440812 CHD1O14646 1710 aa38.32■■■■□ 3.72
SMG7-205ENST00000440812 POLA1P09884 1462 aaPredicted RBP38.28■■■■□ 3.72
SMG7-205ENST00000440812 RIMBP3CA6NJZ7 1639 aa38.27■■■■□ 3.72
SMG7-205ENST00000440812 RIMBP3BA6NNM3 1639 aa38.27■■■■□ 3.72
SMG7-205ENST00000440812 RIMBP3Q9UFD9 1639 aa38.27■■■■□ 3.72
SMG7-205ENST00000440812 AQRO60306 1485 aaKnown RBP eCLIP38.24■■■■□ 3.711e-6■■■■■ 27.1
SMG7-205ENST00000440812 RAD54L2Q9Y4B4 1467 aa38.18■■■■□ 3.7
SMG7-205ENST00000440812 CUX1P39880 1505 aa38.09■■■■□ 3.69
SMG7-205ENST00000440812 FGD5Q6ZNL6 1462 aa38.08■■■■□ 3.69
SMG7-205ENST00000440812 ARHGEF11O15085 1522 aa38.05■■■■□ 3.68
SMG7-205ENST00000440812 SOGA1O94964 1423 aa38.04■■■■□ 3.68
SMG7-205ENST00000440812 TDRD9Q8NDG6 1382 aaKnown RBP37.99■■■■□ 3.67
SMG7-205ENST00000440812 SUPT5HO00267 1087 aaKnown RBP37.99■■■■□ 3.67
SMG7-205ENST00000440812 WDR97A6NE52 1622 aa37.97■■■■□ 3.67
SMG7-205ENST00000440812 FBLN2P98095 1184 aa37.91■■■■□ 3.66
SMG7-205ENST00000440812 SNAPC4Q5SXM2 1469 aa37.87■■■■□ 3.65
SMG7-205ENST00000440812 PBRM1Q86U86 1689 aa37.85■■■■□ 3.65
SMG7-205ENST00000440812 GRIN2BQ13224 1484 aa37.7■■■■□ 3.63
SMG7-205ENST00000440812 ARAP1Q96P48 1450 aa37.7■■■■□ 3.63
SMG7-205ENST00000440812 MAGI1Q96QZ7 1491 aaPredicted RBP37.69■■■■□ 3.62
SMG7-205ENST00000440812 CYB5RLQ6IPT4 315 aa37.68■■■■□ 3.62
SMG7-205ENST00000440812 CLASP1Q7Z460 1538 aa37.67■■■■□ 3.62
SMG7-205ENST00000440812 ABCA5Q8WWZ7 1642 aa37.65■■■■□ 3.62
SMG7-205ENST00000440812 SYNJ1O43426 1573 aa37.62■■■■□ 3.61
SMG7-205ENST00000440812 GAPVD1Q14C86 1478 aa37.61■■■■□ 3.61
SMG7-205ENST00000440812 CHMP7Q8WUX9 453 aaPredicted RBP37.59■■■■□ 3.61
SMG7-205ENST00000440812 ABCA10Q8WWZ4 1543 aa37.58■■■■□ 3.61
SMG7-205ENST00000440812 SYNJ2O15056 1496 aa37.58■■■■□ 3.61
SMG7-205ENST00000440812 BIVM-ERCC5R4GMW8 1640 aa37.58■■■■□ 3.61
SMG7-205ENST00000440812 TOP2BQ02880 1626 aa37.5■■■■□ 3.59
SMG7-205ENST00000440812 WRNQ14191 1432 aaPredicted RBP eCLIP37.38■■■■□ 3.57
SMG7-205ENST00000440812 ADAMTS12P58397 1594 aa37.35■■■■□ 3.57
SMG7-205ENST00000440812 GRIN2AQ12879 1464 aa37.26■■■■□ 3.56
SMG7-205ENST00000440812 CEP170Q5SW79 1584 aa37.24■■■■□ 3.55
SMG7-205ENST00000440812 TRHP20396 242 aaPredicted RBP37.22■■■■□ 3.55
SMG7-205ENST00000440812 ERCC6L2Q5T890 1561 aa37.2■■■■□ 3.55
SMG7-205ENST00000440812 ERICH3Q5RHP9 1530 aa37.12■■■■□ 3.53
SMG7-205ENST00000440812 NUP160Q12769 1436 aa37.1■■■■□ 3.53
SMG7-205ENST00000440812 FHAD1B1AJZ9 1412 aa37.09■■■■□ 3.53
SMG7-205ENST00000440812 SHROOM2Q13796 1616 aa37.06■■■■□ 3.52
SMG7-205ENST00000440812 RUSC2Q8N2Y8 1516 aa36.84■■■■□ 3.49
SMG7-205ENST00000440812 PRG4Q92954 1404 aaPredicted RBP36.74■■■■□ 3.47
SMG7-205ENST00000440812 CUL7Q14999 1698 aa36.7■■■■□ 3.47
SMG7-205ENST00000440812 KIF13AQ9H1H9 1805 aa36.68■■■■□ 3.46
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms