RNA–Protein interactions for RNA: ENST00000392571.6

PDK1-202, Transcript of pyruvate dehydrogenase kinase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDK1, Length 1,515 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDK1-202ENST00000392571 NISCHQ9Y2I1 1504 aa57.97■■■■■ 6.87
PDK1-202ENST00000392571 CCDC180Q9P1Z9 1646 aa50.9■■■■■ 5.74
PDK1-202ENST00000392571 ABCC9O60706 1549 aa48.86■■■■■ 5.41
PDK1-202ENST00000392571 ZCCHC6Q5VYS8 1495 aaKnown RBP48.5■■■■■ 5.35
PDK1-202ENST00000392571 DCAF8L2P0C7V8 631 aa48.08■■■■■ 5.29
PDK1-202ENST00000392571 DCAF1Q9Y4B6 1507 aa47.98■■■■■ 5.27
PDK1-202ENST00000392571 MYO15BQ96JP2 1530 aa47.75■■■■■ 5.23
PDK1-202ENST00000392571 NACADO15069 1562 aa47.66■■■■■ 5.22
PDK1-202ENST00000392571 RB1CC1Q8TDY2 1594 aa47.42■■■■■ 5.18
PDK1-202ENST00000392571 SCRIBQ14160 1630 aa46.61■■■■■ 5.05
PDK1-202ENST00000392571 SHROOM4Q9ULL8 1493 aa46.56■■■■■ 5.04
PDK1-202ENST00000392571 UNC13AQ9UPW8 1703 aa46.36■■■■■ 5.01
PDK1-202ENST00000392571 BICRAQ9NZM4 1560 aa46■■■■■ 4.95
PDK1-202ENST00000392571 PABPN1Q86U42 306 aaKnown RBP eCLIP45.94■■■■■ 4.95
PDK1-202ENST00000392571 CECR2Q9BXF3 1484 aa45.08■■■■■ 4.81
PDK1-202ENST00000392571 BAZ1AQ9NRL2 1556 aaPredicted RBP44.81■■■■■ 4.76
PDK1-202ENST00000392571 MROH2BQ7Z745 1585 aa44.72■■■■■ 4.75
PDK1-202ENST00000392571 SMARCA4P51532 1647 aa44.69■■■■■ 4.75
PDK1-202ENST00000392571 EIF4G1Q04637 1599 aaKnown RBP44.68■■■■■ 4.74
PDK1-202ENST00000392571 RSF1Q96T23 1441 aaPredicted RBP44.64■■■■■ 4.74
PDK1-202ENST00000392571 SUPT5HO00267 1087 aaKnown RBP44.42■■■■■ 4.7
PDK1-202ENST00000392571 WIZO95785 1651 aa44.27■■■■■ 4.68
PDK1-202ENST00000392571 PEG3Q9GZU2 1588 aa44.24■■■■■ 4.67
PDK1-202ENST00000392571 ATAD2BQ9ULI0 1458 aa44.22■■■■■ 4.67
PDK1-202ENST00000392571 CC2D2AQ9P2K1 1620 aa44.21■■■■■ 4.67
PDK1-202ENST00000392571 SMARCA2P51531 1590 aa44.16■■■■■ 4.66
PDK1-202ENST00000392571 NCAPD3P42695 1498 aa44.03■■■■■ 4.64
PDK1-202ENST00000392571 DNAJC5BQ9UF47 199 aa43.95■■■■■ 4.63
PDK1-202ENST00000392571 BAZ1BQ9UIG0 1483 aaKnown RBP43.88■■■■■ 4.61
PDK1-202ENST00000392571 HMGXB3Q12766 1538 aa43.83■■■■■ 4.61
PDK1-202ENST00000392571 TOP2AP11388 1531 aaKnown RBP43.83■■■■■ 4.61
PDK1-202ENST00000392571 CCDC88BA6NC98 1476 aa43.38■■■■■ 4.54
PDK1-202ENST00000392571 CADPSQ9ULU8 1353 aa42.83■■■■■ 4.45
PDK1-202ENST00000392571 CFTRP13569 1480 aa42.78■■■■■ 4.44
PDK1-202ENST00000392571 NESP48681 1621 aa42.64■■■■■ 4.42
PDK1-202ENST00000392571 LAMC3Q9Y6N6 1575 aa42.61■■■■■ 4.41
PDK1-202ENST00000392571 PRDM2Q13029 1718 aa42.42■■■■■ 4.38
PDK1-202ENST00000392571 PDS5BQ9NTI5 1447 aa42.33■■■■■ 4.37
PDK1-202ENST00000392571 FANCD2Q9BXW9 1451 aa42.29■■■■■ 4.36
PDK1-202ENST00000392571 CHIC1Q5VXU3 224 aa42.15■■■■■ 4.34
PDK1-202ENST00000392571 ABCC8Q09428 1581 aa42.12■■■■■ 4.33
PDK1-202ENST00000392571 CEP164Q9UPV0 1460 aa42.1■■■■■ 4.33
PDK1-202ENST00000392571 KIF21AQ7Z4S6 1674 aa42.07■■■■■ 4.33
PDK1-202ENST00000392571 WRNQ14191 1432 aaPredicted RBP eCLIP42.03■■■■■ 4.32
PDK1-202ENST00000392571 ERCC6Q03468 1493 aa41.97■■■■■ 4.31
PDK1-202ENST00000392571 TRIM41Q8WV44 630 aa41.89■■■■■ 4.3
PDK1-202ENST00000392571 CUX1P39880 1505 aa41.87■■■■■ 4.29
PDK1-202ENST00000392571 SYNJ1O43426 1573 aa41.84■■■■■ 4.29
PDK1-202ENST00000392571 MRC2Q9UBG0 1479 aa41.81■■■■■ 4.28
PDK1-202ENST00000392571 URB2Q14146 1524 aaKnown RBP41.81■■■■■ 4.28
PDK1-202ENST00000392571 TOP2BQ02880 1626 aa41.77■■■■■ 4.28
PDK1-202ENST00000392571 DNMBPQ6XZF7 1577 aa41.75■■■■■ 4.27
PDK1-202ENST00000392571 TOPBP1Q92547 1522 aa41.74■■■■■ 4.27
PDK1-202ENST00000392571 BIVM-ERCC5R4GMW8 1640 aa41.72■■■■■ 4.27
PDK1-202ENST00000392571 THOC2Q8NI27 1593 aaKnown RBP41.65■■■■■ 4.26
PDK1-202ENST00000392571 WDR62O43379 1518 aa41.62■■■■■ 4.25
PDK1-202ENST00000392571 FGD5Q6ZNL6 1462 aa41.53■■■■■ 4.24
PDK1-202ENST00000392571 POLA1P09884 1462 aaPredicted RBP41.47■■■■■ 4.23
PDK1-202ENST00000392571 SOGA1O94964 1423 aa41.36■■■■■ 4.21
PDK1-202ENST00000392571 CUX2O14529 1486 aa41.32■■■■■ 4.2
PDK1-202ENST00000392571 RAD54L2Q9Y4B4 1467 aa41.32■■■■■ 4.2
PDK1-202ENST00000392571 TARBP1Q13395 1621 aaKnown RBP41.18■■■■■ 4.18
PDK1-202ENST00000392571 IFT140Q96RY7 1462 aa41.18■■■■■ 4.18
PDK1-202ENST00000392571 ABCA10Q8WWZ4 1543 aa41.18■■■■■ 4.18
PDK1-202ENST00000392571 RUSC2Q8N2Y8 1516 aa41.1■■■■■ 4.17
PDK1-202ENST00000392571 WDR97A6NE52 1622 aa41.06■■■■■ 4.16
PDK1-202ENST00000392571 KIF27Q86VH2 1401 aa41.05■■■■■ 4.16
PDK1-202ENST00000392571 FAM9AQ8IZU1 332 aaPredicted RBP41.02■■■■■ 4.16
PDK1-202ENST00000392571 TDRD9Q8NDG6 1382 aaKnown RBP41.01■■■■■ 4.16
PDK1-202ENST00000392571 EEA1Q15075 1411 aa41■■■■■ 4.15
PDK1-202ENST00000392571 ZNF608Q9ULD9 1512 aaPredicted RBP40.95■■■■■ 4.15
PDK1-202ENST00000392571 AQRO60306 1485 aaKnown RBP eCLIP40.89■■■■■ 4.143e-7■■■□□ 17.4
PDK1-202ENST00000392571 CSRNP3Q8WYN3 585 aa40.88■■■■■ 4.14
PDK1-202ENST00000392571 ABCA5Q8WWZ7 1642 aa40.87■■■■■ 4.13
PDK1-202ENST00000392571 GAPVD1Q14C86 1478 aa40.87■■■■■ 4.13
PDK1-202ENST00000392571 IGF1RP08069 1367 aa40.82■■■■■ 4.12
PDK1-202ENST00000392571 EIF4G3O43432 1585 aaKnown RBP40.75■■■■■ 4.11
PDK1-202ENST00000392571 ERICH3Q5RHP9 1530 aa40.69■■■■■ 4.1
PDK1-202ENST00000392571 GRIN2BQ13224 1484 aa40.69■■■■■ 4.1
PDK1-202ENST00000392571 PBRM1Q86U86 1689 aa40.62■■■■■ 4.09
PDK1-202ENST00000392571 PRXQ9BXM0 1461 aa40.58■■■■■ 4.09
PDK1-202ENST00000392571 CARMIL1Q5VZK9 1371 aa40.57■■■■■ 4.09
PDK1-202ENST00000392571 CUL7Q14999 1698 aa40.49■■■■■ 4.07
PDK1-202ENST00000392571 SNAPC4Q5SXM2 1469 aa40.48■■■■■ 4.07
PDK1-202ENST00000392571 LOC105371045A0A1W2PR82 267 aa40.47■■■■■ 4.07
PDK1-202ENST00000392571 KIF21BO75037 1637 aa40.46■■■■■ 4.07
PDK1-202ENST00000392571 MAGI1Q96QZ7 1491 aaPredicted RBP40.44■■■■■ 4.06
PDK1-202ENST00000392571 FHAD1B1AJZ9 1412 aa40.43■■■■■ 4.06
PDK1-202ENST00000392571 RAPGEF2Q9Y4G8 1499 aa40.41■■■■■ 4.06
PDK1-202ENST00000392571 EHMT2Q96KQ7 1210 aa40.41■■■■■ 4.06
PDK1-202ENST00000392571 ADAMTS12P58397 1594 aa40.39■■■■■ 4.06
PDK1-202ENST00000392571 GOLGA3Q08378 1498 aa40.35■■■■■ 4.05
PDK1-202ENST00000392571 SYNJ2O15056 1496 aa40.29■■■■■ 4.04
PDK1-202ENST00000392571 CHMP7Q8WUX9 453 aaPredicted RBP40.25■■■■■ 4.03
PDK1-202ENST00000392571 UBTFP17480 764 aaKnown RBP40.22■■■■■ 4.03
PDK1-202ENST00000392571 FBLN2P98095 1184 aa40.19■■■■■ 4.02
PDK1-202ENST00000392571 GRIN2AQ12879 1464 aa40.17■■■■■ 4.02
PDK1-202ENST00000392571 TNIKQ9UKE5 1360 aa40.11■■■■■ 4.01
PDK1-202ENST00000392571 CHD1O14646 1710 aa40.02■■■■■ 4
PDK1-202ENST00000392571 NUP160Q12769 1436 aa39.96■■■■□ 3.99
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms