RNA–Protein interactions for RNA: ENST00000296325.9

LRPAP1-201, Transcript of LDL receptor related protein associated protein 1, humanhuman

TSL 1 (best)

Gene LRPAP1, Length 1,078 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRPAP1-201ENST00000296325 NISCHQ9Y2I1 1504 aa45.82■■■■■ 4.93
LRPAP1-201ENST00000296325 ABCC9O60706 1549 aa42.18■■■■■ 4.34
LRPAP1-201ENST00000296325 CCDC180Q9P1Z9 1646 aa41.45■■■■■ 4.23
LRPAP1-201ENST00000296325 DNAJC5BQ9UF47 199 aa40.36■■■■■ 4.05
LRPAP1-201ENST00000296325 RB1CC1Q8TDY2 1594 aa39.81■■■■□ 3.96
LRPAP1-201ENST00000296325 NACADO15069 1562 aa39.39■■■■□ 3.9
LRPAP1-201ENST00000296325 PABPN1Q86U42 306 aaKnown RBP eCLIP39.12■■■■□ 3.85
LRPAP1-201ENST00000296325 UNC13AQ9UPW8 1703 aa38.91■■■■□ 3.82
LRPAP1-201ENST00000296325 DCAF8L2P0C7V8 631 aa38.8■■■■□ 3.8
LRPAP1-201ENST00000296325 BICRAQ9NZM4 1560 aa38.78■■■■□ 3.8
LRPAP1-201ENST00000296325 MYO15BQ96JP2 1530 aa38.68■■■■□ 3.78
LRPAP1-201ENST00000296325 SHROOM4Q9ULL8 1493 aa38.19■■■■□ 3.7
LRPAP1-201ENST00000296325 CECR2Q9BXF3 1484 aa38.1■■■■□ 3.69
LRPAP1-201ENST00000296325 CC2D2AQ9P2K1 1620 aa38.09■■■■□ 3.69
LRPAP1-201ENST00000296325 DCAF1Q9Y4B6 1507 aa37.87■■■■□ 3.65
LRPAP1-201ENST00000296325 EIF4G1Q04637 1599 aaKnown RBP37.84■■■■□ 3.65
LRPAP1-201ENST00000296325 ZCCHC6Q5VYS8 1495 aaKnown RBP37.84■■■■□ 3.65
LRPAP1-201ENST00000296325 SCRIBQ14160 1630 aa37.65■■■■□ 3.62
LRPAP1-201ENST00000296325 DNAJC5Q9H3Z4 198 aa37.63■■■■□ 3.61
LRPAP1-201ENST00000296325 CUX2O14529 1486 aa36.75■■■■□ 3.47
LRPAP1-201ENST00000296325 ERCC6Q03468 1493 aa36.43■■■■□ 3.42
LRPAP1-201ENST00000296325 NCAPD3P42695 1498 aa36.42■■■■□ 3.42
LRPAP1-201ENST00000296325 ATAD2BQ9ULI0 1458 aa36.17■■■■□ 3.38
LRPAP1-201ENST00000296325 HMGXB3Q12766 1538 aa36.06■■■■□ 3.36
LRPAP1-201ENST00000296325 NESP48681 1621 aa36.04■■■■□ 3.36
LRPAP1-201ENST00000296325 SMARCA2P51531 1590 aa35.99■■■■□ 3.35
LRPAP1-201ENST00000296325 SMARCA4P51532 1647 aa35.9■■■■□ 3.34
LRPAP1-201ENST00000296325 THOC2Q8NI27 1593 aaKnown RBP35.87■■■■□ 3.33
LRPAP1-201ENST00000296325 BAZ1BQ9UIG0 1483 aaKnown RBP35.72■■■■□ 3.31
LRPAP1-201ENST00000296325 LAMC3Q9Y6N6 1575 aa35.67■■■■□ 3.3
LRPAP1-201ENST00000296325 PEG3Q9GZU2 1588 aa35.64■■■■□ 3.3
LRPAP1-201ENST00000296325 BAZ1AQ9NRL2 1556 aaPredicted RBP35.6■■■■□ 3.29
LRPAP1-201ENST00000296325 KIF21AQ7Z4S6 1674 aa35.5■■■■□ 3.27
LRPAP1-201ENST00000296325 TRIM41Q8WV44 630 aa35.49■■■■□ 3.27
LRPAP1-201ENST00000296325 PDS5BQ9NTI5 1447 aa35.47■■■■□ 3.27
LRPAP1-201ENST00000296325 MROH2BQ7Z745 1585 aa35.3■■■■□ 3.24
LRPAP1-201ENST00000296325 CADPSQ9ULU8 1353 aa35.24■■■■□ 3.23
LRPAP1-201ENST00000296325 MRC2Q9UBG0 1479 aa35.22■■■■□ 3.23
LRPAP1-201ENST00000296325 WDR62O43379 1518 aa35.21■■■■□ 3.23
LRPAP1-201ENST00000296325 CEP164Q9UPV0 1460 aa34.9■■■■□ 3.18
LRPAP1-201ENST00000296325 OSCARQ8IYS5 282 aa34.86■■■■□ 3.17
LRPAP1-201ENST00000296325 FANCD2Q9BXW9 1451 aa34.81■■■■□ 3.16
LRPAP1-201ENST00000296325 WIZO95785 1651 aa34.78■■■■□ 3.16
LRPAP1-201ENST00000296325 CFTRP13569 1480 aa34.7■■■■□ 3.15
LRPAP1-201ENST00000296325 URB2Q14146 1524 aaKnown RBP34.61■■■■□ 3.13
LRPAP1-201ENST00000296325 RIMBP3CA6NJZ7 1639 aa34.52■■■■□ 3.12
LRPAP1-201ENST00000296325 RIMBP3BA6NNM3 1639 aa34.52■■■■□ 3.12
LRPAP1-201ENST00000296325 RIMBP3Q9UFD9 1639 aa34.52■■■■□ 3.12
LRPAP1-201ENST00000296325 ARHGEF11O15085 1522 aa34.36■■■■□ 3.09
LRPAP1-201ENST00000296325 TOP2AP11388 1531 aaKnown RBP34.32■■■■□ 3.08
LRPAP1-201ENST00000296325 ZNF608Q9ULD9 1512 aaPredicted RBP34.3■■■■□ 3.08
LRPAP1-201ENST00000296325 RSF1Q96T23 1441 aaPredicted RBP34.29■■■■□ 3.08
LRPAP1-201ENST00000296325 IFT140Q96RY7 1462 aa34.26■■■■□ 3.07
LRPAP1-201ENST00000296325 PRDM2Q13029 1718 aa34.18■■■■□ 3.06
LRPAP1-201ENST00000296325 TOPBP1Q92547 1522 aa34.08■■■■□ 3.05
LRPAP1-201ENST00000296325 CYB5RLQ6IPT4 315 aa34.07■■■■□ 3.04
LRPAP1-201ENST00000296325 EIF4G3O43432 1585 aaKnown RBP34.04■■■■□ 3.04
LRPAP1-201ENST00000296325 ARAP1Q96P48 1450 aa33.99■■■■□ 3.03
LRPAP1-201ENST00000296325 CCDC88BA6NC98 1476 aa33.94■■■■□ 3.02
LRPAP1-201ENST00000296325 ABCC8Q09428 1581 aa33.93■■■■□ 3.02
LRPAP1-201ENST00000296325 CHD1O14646 1710 aa33.9■■■■□ 3.02
LRPAP1-201ENST00000296325 TRHP20396 242 aaPredicted RBP33.88■■■■□ 3.01
LRPAP1-201ENST00000296325 DNMBPQ6XZF7 1577 aa33.87■■■■□ 3.01
LRPAP1-201ENST00000296325 AQRO60306 1485 aaKnown RBP eCLIP33.86■■■■□ 3.01
LRPAP1-201ENST00000296325 TARBP1Q13395 1621 aaKnown RBP33.86■■■■□ 3.01
LRPAP1-201ENST00000296325 POLA1P09884 1462 aaPredicted RBP33.69■■■□□ 2.98
LRPAP1-201ENST00000296325 FBLN2P98095 1184 aa33.67■■■□□ 2.98
LRPAP1-201ENST00000296325 CLASP1Q7Z460 1538 aa33.59■■■□□ 2.97
LRPAP1-201ENST00000296325 RAD54L2Q9Y4B4 1467 aa33.55■■■□□ 2.96
LRPAP1-201ENST00000296325 TDRD9Q8NDG6 1382 aaKnown RBP33.51■■■□□ 2.96
LRPAP1-201ENST00000296325 SNAPC4Q5SXM2 1469 aa33.49■■■□□ 2.95
LRPAP1-201ENST00000296325 SOGA1O94964 1423 aa33.47■■■□□ 2.95
LRPAP1-201ENST00000296325 WDR97A6NE52 1622 aa33.46■■■□□ 2.95
LRPAP1-201ENST00000296325 AEBP2Q6ZN18 517 aaPredicted RBP33.44■■■□□ 2.94
LRPAP1-201ENST00000296325 SYNJ1O43426 1573 aa33.42■■■□□ 2.94
LRPAP1-201ENST00000296325 MAGI1Q96QZ7 1491 aaPredicted RBP33.4■■■□□ 2.94
LRPAP1-201ENST00000296325 CHMP7Q8WUX9 453 aaPredicted RBP33.34■■■□□ 2.93
LRPAP1-201ENST00000296325 FGD5Q6ZNL6 1462 aa33.33■■■□□ 2.93
LRPAP1-201ENST00000296325 GRIN2BQ13224 1484 aa33.3■■■□□ 2.92
LRPAP1-201ENST00000296325 SYNJ2O15056 1496 aa33.29■■■□□ 2.92
LRPAP1-201ENST00000296325 GAPVD1Q14C86 1478 aa33.24■■■□□ 2.91
LRPAP1-201ENST00000296325 CUX1P39880 1505 aa33.21■■■□□ 2.91
LRPAP1-201ENST00000296325 PBRM1Q86U86 1689 aa33.06■■■□□ 2.88
LRPAP1-201ENST00000296325 ERCC6L2Q5T890 1561 aa32.98■■■□□ 2.87
LRPAP1-201ENST00000296325 ABCA5Q8WWZ7 1642 aa32.97■■■□□ 2.87
LRPAP1-201ENST00000296325 ABCA10Q8WWZ4 1543 aa32.96■■■□□ 2.87
LRPAP1-201ENST00000296325 GRIN2AQ12879 1464 aa32.88■■■□□ 2.85
LRPAP1-201ENST00000296325 NUP160Q12769 1436 aa32.85■■■□□ 2.85
LRPAP1-201ENST00000296325 CEP170Q5SW79 1584 aa32.85■■■□□ 2.85
LRPAP1-201ENST00000296325 SHROOM2Q13796 1616 aa32.78■■■□□ 2.84
LRPAP1-201ENST00000296325 ADAMTS12P58397 1594 aa32.76■■■□□ 2.84
LRPAP1-201ENST00000296325 KIF13AQ9H1H9 1805 aa32.72■■■□□ 2.83
LRPAP1-201ENST00000296325 FHAD1B1AJZ9 1412 aa32.63■■■□□ 2.81
LRPAP1-201ENST00000296325 WRNQ14191 1432 aaPredicted RBP eCLIP32.61■■■□□ 2.81
LRPAP1-201ENST00000296325 PRG4Q92954 1404 aaPredicted RBP32.51■■■□□ 2.8
LRPAP1-201ENST00000296325 ERICH3Q5RHP9 1530 aa32.51■■■□□ 2.79
LRPAP1-201ENST00000296325 ABCC10Q5T3U5 1492 aa32.5■■■□□ 2.79
LRPAP1-201ENST00000296325 TOP2BQ02880 1626 aa32.44■■■□□ 2.78
LRPAP1-201ENST00000296325 BIVM-ERCC5R4GMW8 1640 aa32.44■■■□□ 2.78
LRPAP1-201ENST00000296325 MAPKBP1O60336 1514 aa32.43■■■□□ 2.78
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms