RNA–Protein interactions for RNA: ENST00000262210.9

CSPP1-201, Transcript of centrosome and spindle pole associated protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CSPP1, Length 4,367 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPP1-201ENST00000262210 NISCHQ9Y2I1 1504 aa13.14□□□□□ -0.31
CSPP1-201ENST00000262210 CCDC180Q9P1Z9 1646 aa11.41□□□□□ -0.58
CSPP1-201ENST00000262210 ZCCHC6Q5VYS8 1495 aaKnown RBP11.11□□□□□ -0.63
CSPP1-201ENST00000262210 UNC13AQ9UPW8 1703 aa10.98□□□□□ -0.65
CSPP1-201ENST00000262210 ABCC9O60706 1549 aa10.77□□□□□ -0.69
CSPP1-201ENST00000262210 DCAF1Q9Y4B6 1507 aa10.76□□□□□ -0.69
CSPP1-201ENST00000262210 BICRAQ9NZM4 1560 aa10.7□□□□□ -0.7
CSPP1-201ENST00000262210 MYO15BQ96JP2 1530 aa10.59□□□□□ -0.71
CSPP1-201ENST00000262210 SCRIBQ14160 1630 aa10.59□□□□□ -0.71
CSPP1-201ENST00000262210 SHROOM4Q9ULL8 1493 aa10.57□□□□□ -0.72
CSPP1-201ENST00000262210 CECR2Q9BXF3 1484 aa10.46□□□□□ -0.73
CSPP1-201ENST00000262210 NACADO15069 1562 aa10.44□□□□□ -0.74
CSPP1-201ENST00000262210 MROH2BQ7Z745 1585 aa10.35□□□□□ -0.75
CSPP1-201ENST00000262210 WIZO95785 1651 aa10.33□□□□□ -0.76
CSPP1-201ENST00000262210 EIF4G1Q04637 1599 aaKnown RBP10.31□□□□□ -0.76
CSPP1-201ENST00000262210 RB1CC1Q8TDY2 1594 aa10.3□□□□□ -0.76
CSPP1-201ENST00000262210 DNAJC5BQ9UF47 199 aa10.22□□□□□ -0.77
CSPP1-201ENST00000262210 RSF1Q96T23 1441 aaPredicted RBP10.22□□□□□ -0.77
CSPP1-201ENST00000262210 SMARCA4P51532 1647 aa10.16□□□□□ -0.78
CSPP1-201ENST00000262210 DCAF8L2P0C7V8 631 aa10.16□□□□□ -0.78
CSPP1-201ENST00000262210 PEG3Q9GZU2 1588 aa10.12□□□□□ -0.79
CSPP1-201ENST00000262210 PABPN1Q86U42 306 aaKnown RBP eCLIP10.11□□□□□ -0.79
CSPP1-201ENST00000262210 BAZ1AQ9NRL2 1556 aaPredicted RBP10.05□□□□□ -0.8
CSPP1-201ENST00000262210 SMARCA2P51531 1590 aa10.01□□□□□ -0.81
CSPP1-201ENST00000262210 CC2D2AQ9P2K1 1620 aa9.92□□□□□ -0.82
CSPP1-201ENST00000262210 ATAD2BQ9ULI0 1458 aa9.91□□□□□ -0.82
CSPP1-201ENST00000262210 CCDC88BA6NC98 1476 aa9.89□□□□□ -0.83
CSPP1-201ENST00000262210 TOP2AP11388 1531 aaKnown RBP9.89□□□□□ -0.83
CSPP1-201ENST00000262210 ABCC8Q09428 1581 aa9.84□□□□□ -0.83
CSPP1-201ENST00000262210 SUPT5HO00267 1087 aaKnown RBP9.83□□□□□ -0.84
CSPP1-201ENST00000262210 SYNJ1O43426 1573 aa9.77□□□□□ -0.84
CSPP1-201ENST00000262210 NESP48681 1621 aa9.75□□□□□ -0.85
CSPP1-201ENST00000262210 HMGXB3Q12766 1538 aa9.75□□□□□ -0.85
CSPP1-201ENST00000262210 NCAPD3P42695 1498 aa9.74□□□□□ -0.85
CSPP1-201ENST00000262210 PRDM2Q13029 1718 aa9.74□□□□□ -0.85
CSPP1-201ENST00000262210 RUSC2Q8N2Y8 1516 aa9.73□□□□□ -0.85
CSPP1-201ENST00000262210 KIF21AQ7Z4S6 1674 aa9.69□□□□□ -0.86
CSPP1-201ENST00000262210 CHIC1Q5VXU3 224 aa9.66□□□□□ -0.86
CSPP1-201ENST00000262210 CUX1P39880 1505 aa9.63□□□□□ -0.87
CSPP1-201ENST00000262210 WDR97A6NE52 1622 aa9.61□□□□□ -0.87
CSPP1-201ENST00000262210 BIVM-ERCC5R4GMW8 1640 aa9.6□□□□□ -0.87
CSPP1-201ENST00000262210 BAZ1BQ9UIG0 1483 aaKnown RBP9.59□□□□□ -0.87
CSPP1-201ENST00000262210 CFTRP13569 1480 aa9.59□□□□□ -0.87
CSPP1-201ENST00000262210 SOGA1O94964 1423 aa9.54□□□□□ -0.88
CSPP1-201ENST00000262210 TOP2BQ02880 1626 aa9.52□□□□□ -0.89
CSPP1-201ENST00000262210 URB2Q14146 1524 aaKnown RBP9.52□□□□□ -0.89
CSPP1-201ENST00000262210 THOC2Q8NI27 1593 aaKnown RBP9.51□□□□□ -0.89
CSPP1-201ENST00000262210 TARBP1Q13395 1621 aaKnown RBP9.49□□□□□ -0.89
CSPP1-201ENST00000262210 LRRIQ1Q96JM4 1722 aa9.47□□□□□ -0.89
CSPP1-201ENST00000262210 CUX2O14529 1486 aa9.44□□□□□ -0.9
CSPP1-201ENST00000262210 LOC105371045A0A1W2PR82 267 aa9.42□□□□□ -0.9
CSPP1-201ENST00000262210 ABCA5Q8WWZ7 1642 aa9.38□□□□□ -0.91
CSPP1-201ENST00000262210 RAD54L2Q9Y4B4 1467 aa9.37□□□□□ -0.91
CSPP1-201ENST00000262210 LAMC3Q9Y6N6 1575 aa9.35□□□□□ -0.91
CSPP1-201ENST00000262210 CADPSQ9ULU8 1353 aa9.35□□□□□ -0.91
CSPP1-201ENST00000262210 TOPBP1Q92547 1522 aa9.34□□□□□ -0.91
CSPP1-201ENST00000262210 POLA1P09884 1462 aaPredicted RBP9.34□□□□□ -0.91
CSPP1-201ENST00000262210 ZNF608Q9ULD9 1512 aaPredicted RBP9.33□□□□□ -0.92
CSPP1-201ENST00000262210 FANCD2Q9BXW9 1451 aa9.33□□□□□ -0.92
CSPP1-201ENST00000262210 WDR62O43379 1518 aa9.31□□□□□ -0.92
CSPP1-201ENST00000262210 FGD5Q6ZNL6 1462 aa9.31□□□□□ -0.92
CSPP1-201ENST00000262210 WRNQ14191 1432 aaPredicted RBP eCLIP9.3□□□□□ -0.92
CSPP1-201ENST00000262210 RAPGEF2Q9Y4G8 1499 aa9.29□□□□□ -0.92
CSPP1-201ENST00000262210 DNMBPQ6XZF7 1577 aa9.28□□□□□ -0.92
CSPP1-201ENST00000262210 PBRM1Q86U86 1689 aa9.28□□□□□ -0.92
CSPP1-201ENST00000262210 PRXQ9BXM0 1461 aa9.26□□□□□ -0.93
CSPP1-201ENST00000262210 EIF4G3O43432 1585 aaKnown RBP9.23□□□□□ -0.93
CSPP1-201ENST00000262210 KIF21BO75037 1637 aa9.22□□□□□ -0.93
CSPP1-201ENST00000262210 ABCA10Q8WWZ4 1543 aa9.21□□□□□ -0.94
CSPP1-201ENST00000262210 IGF1RP08069 1367 aa9.18□□□□□ -0.94
CSPP1-201ENST00000262210 ERCC6L2Q5T890 1561 aa9.17□□□□□ -0.94
CSPP1-201ENST00000262210 ARAP1Q96P48 1450 aa9.15□□□□□ -0.94
CSPP1-201ENST00000262210 CEP170Q5SW79 1584 aa9.15□□□□□ -0.94
CSPP1-201ENST00000262210 AQRO60306 1485 aaKnown RBP eCLIP9.14□□□□□ -0.952e-8■■□□□ 14.3
CSPP1-201ENST00000262210 ADAMTS12P58397 1594 aa9.13□□□□□ -0.95
CSPP1-201ENST00000262210 CEP164Q9UPV0 1460 aa9.12□□□□□ -0.95
CSPP1-201ENST00000262210 MAGI3Q5TCQ9 1506 aa9.12□□□□□ -0.95
CSPP1-201ENST00000262210 CHD1O14646 1710 aa9.11□□□□□ -0.95
CSPP1-201ENST00000262210 CTTNBP2Q8WZ74 1663 aa9.11□□□□□ -0.95
CSPP1-201ENST00000262210 SAMD9Q5K651 1589 aa9.1□□□□□ -0.95
CSPP1-201ENST00000262210 ARHGAP35Q9NRY4 1499 aa9.08□□□□□ -0.96
CSPP1-201ENST00000262210 MRC2Q9UBG0 1479 aa9.08□□□□□ -0.96
CSPP1-201ENST00000262210 TDRD9Q8NDG6 1382 aaKnown RBP9.08□□□□□ -0.96
CSPP1-201ENST00000262210 FAM9AQ8IZU1 332 aaPredicted RBP9.07□□□□□ -0.96
CSPP1-201ENST00000262210 ERICH3Q5RHP9 1530 aa9.05□□□□□ -0.96
CSPP1-201ENST00000262210 EHMT2Q96KQ7 1210 aa9.05□□□□□ -0.96
CSPP1-201ENST00000262210 TRIM41Q8WV44 630 aa9.04□□□□□ -0.96
CSPP1-201ENST00000262210 DISP1Q96F81 1524 aa9.03□□□□□ -0.96
CSPP1-201ENST00000262210 SNAPC4Q5SXM2 1469 aa9.03□□□□□ -0.96
CSPP1-201ENST00000262210 SHROOM2Q13796 1616 aa9.02□□□□□ -0.97
CSPP1-201ENST00000262210 GOLGB1Q14789 3259 aaKnown RBP9□□□□□ -0.97
CSPP1-201ENST00000262210 CEP162Q5TB80 1403 aa9□□□□□ -0.97
CSPP1-201ENST00000262210 CUL7Q14999 1698 aa8.99□□□□□ -0.97
CSPP1-201ENST00000262210 PCF11O94913 1555 aaKnown RBP8.99□□□□□ -0.97
CSPP1-201ENST00000262210 GAPVD1Q14C86 1478 aa8.97□□□□□ -0.97
CSPP1-201ENST00000262210 CLASP1Q7Z460 1538 aa8.96□□□□□ -0.97
CSPP1-201ENST00000262210 UTRNP46939 3433 aa8.96□□□□□ -0.98
CSPP1-201ENST00000262210 CLIP1P30622 1438 aa8.94□□□□□ -0.98
CSPP1-201ENST00000262210 PDS5BQ9NTI5 1447 aa8.94□□□□□ -0.98
CSPP1-201ENST00000262210 CFAP43Q8NDM7 1665 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms