RNA–Protein interactions for RNA: ENST00000500728.2

LRPAP1-202, Transcript of LDL receptor related protein associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRPAP1, Length 7,819 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRPAP1-202ENST00000500728 DCAF8L2P0C7V8 631 aa21.45■■□□□ 1.02
LRPAP1-202ENST00000500728 EHMT2Q96KQ7 1210 aa20.32■□□□□ 0.84
LRPAP1-202ENST00000500728 PELP1Q8IZL8 1130 aaKnown RBP20.32■□□□□ 0.84
LRPAP1-202ENST00000500728 SUPT5HO00267 1087 aaKnown RBP20.25■□□□□ 0.83
LRPAP1-202ENST00000500728 SHROOM4Q9ULL8 1493 aa19.76■□□□□ 0.75
LRPAP1-202ENST00000500728 ERICH6Q7L0X2 663 aa19.67■□□□□ 0.74
LRPAP1-202ENST00000500728 TTBK1Q5TCY1 1321 aaPredicted RBP19.62■□□□□ 0.73
LRPAP1-202ENST00000500728 APLP2Q06481 763 aa19.49■□□□□ 0.71
LRPAP1-202ENST00000500728 FAM9AQ8IZU1 332 aaPredicted RBP19.43■□□□□ 0.7
LRPAP1-202ENST00000500728 CCER1Q8TC90 406 aaPredicted RBP19.38■□□□□ 0.69
LRPAP1-202ENST00000500728 MYT1Q01538 1121 aa19.34■□□□□ 0.69
LRPAP1-202ENST00000500728 CENPBP07199 599 aaPredicted RBP19.32■□□□□ 0.68
LRPAP1-202ENST00000500728 PCGF6Q9BYE7 350 aa19.26■□□□□ 0.67
LRPAP1-202ENST00000500728 RANGAP1P46060 587 aaPredicted RBP19.25■□□□□ 0.67
LRPAP1-202ENST00000500728 ATP1B4Q9UN42 357 aaPredicted RBP19.07■□□□□ 0.64
LRPAP1-202ENST00000500728 YTHDC1Q96MU7 727 aaKnown RBP18.98■□□□□ 0.63
LRPAP1-202ENST00000500728 NEFLP07196 543 aa18.93■□□□□ 0.62
LRPAP1-202ENST00000500728 ZEB1P37275 1124 aaPredicted RBP18.9■□□□□ 0.62
LRPAP1-202ENST00000500728 MYT1LQ9UL68 1186 aa18.65■□□□□ 0.58
LRPAP1-202ENST00000500728 PPARGC1BQ86YN6 1023 aaKnown RBP18.63■□□□□ 0.57
LRPAP1-202ENST00000500728 DAXXQ9UER7 740 aaPredicted RBP18.6■□□□□ 0.57
LRPAP1-202ENST00000500728 NISCHQ9Y2I1 1504 aa18.58■□□□□ 0.57
LRPAP1-202ENST00000500728 UBTFP17480 764 aaKnown RBP18.57■□□□□ 0.56
LRPAP1-202ENST00000500728 TRIM41Q8WV44 630 aa18.53■□□□□ 0.56
LRPAP1-202ENST00000500728 POLR3GLQ9BT43 218 aa18.52■□□□□ 0.56
LRPAP1-202ENST00000500728 CNGB1Q14028 1251 aaPredicted RBP18.51■□□□□ 0.55
LRPAP1-202ENST00000500728 CHIC1Q5VXU3 224 aa18.51■□□□□ 0.55
LRPAP1-202ENST00000500728 ITGAEP38570 1179 aa18.32■□□□□ 0.52
LRPAP1-202ENST00000500728 SLC4A1APQ9BWU0 796 aaKnown RBP18.26■□□□□ 0.51
LRPAP1-202ENST00000500728 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.24■□□□□ 0.51
LRPAP1-202ENST00000500728 HNRNPUL2Q1KMD3 747 aaKnown RBP18.24■□□□□ 0.51
LRPAP1-202ENST00000500728 RTL5Q5HYW3 569 aaPredicted RBP18.23■□□□□ 0.51
LRPAP1-202ENST00000500728 HRCP23327 699 aa18.2■□□□□ 0.5
LRPAP1-202ENST00000500728 ZNF316A6NFI3 1004 aaPredicted RBP18.15■□□□□ 0.5
LRPAP1-202ENST00000500728 TRIM26Q12899 539 aaPredicted RBP18.11■□□□□ 0.49
LRPAP1-202ENST00000500728 CLSPNQ9HAW4 1339 aa18.08■□□□□ 0.48
LRPAP1-202ENST00000500728 BCL11AQ9H165 835 aa17.89■□□□□ 0.45
LRPAP1-202ENST00000500728 DIEXFQ68CQ4 756 aaKnown RBP17.85■□□□□ 0.45
LRPAP1-202ENST00000500728 SLC24A1O60721 1099 aa17.82■□□□□ 0.44
LRPAP1-202ENST00000500728 BCANQ96GW7 911 aa17.81■□□□□ 0.44
LRPAP1-202ENST00000500728 LOC105371045A0A1W2PR82 267 aa17.8■□□□□ 0.44
LRPAP1-202ENST00000500728 GTF3C3Q9Y5Q9 886 aa17.77■□□□□ 0.43
LRPAP1-202ENST00000500728 CDK11AQ9UQ88 783 aaPredicted RBP17.68■□□□□ 0.42
LRPAP1-202ENST00000500728 EIF5BO60841 1220 aaKnown RBP17.66■□□□□ 0.42
LRPAP1-202ENST00000500728 NEUROD1Q13562 356 aa17.64■□□□□ 0.41
LRPAP1-202ENST00000500728 FAM50AQ14320 339 aaKnown RBP17.63■□□□□ 0.41
LRPAP1-202ENST00000500728 TRIM52Q96A61 297 aa17.59■□□□□ 0.41
LRPAP1-202ENST00000500728 ZBTB47Q9UFB7 747 aaPredicted RBP17.59■□□□□ 0.41
LRPAP1-202ENST00000500728 ZNF326Q5BKZ1 582 aaKnown RBP17.57■□□□□ 0.4
LRPAP1-202ENST00000500728 PLPPR3Q6T4P5 718 aa17.48■□□□□ 0.39
LRPAP1-202ENST00000500728 CANXP27824 592 aaKnown RBP17.48■□□□□ 0.39
LRPAP1-202ENST00000500728 ANP32AP39687 249 aaKnown RBP17.43■□□□□ 0.38
LRPAP1-202ENST00000500728 GLIPR1L2Q4G1C9 344 aa17.41■□□□□ 0.38
LRPAP1-202ENST00000500728 NPM2Q86SE8 214 aaKnown RBP17.4■□□□□ 0.38
LRPAP1-202ENST00000500728 ANP32CO43423 234 aa17.4■□□□□ 0.38
LRPAP1-202ENST00000500728 FBLN2P98095 1184 aa17.37■□□□□ 0.37
LRPAP1-202ENST00000500728 ACIN1Q9UKV3 1341 aaKnown RBP17.31■□□□□ 0.36
LRPAP1-202ENST00000500728 ANP32BQ92688 251 aaKnown RBP17.3■□□□□ 0.36
LRPAP1-202ENST00000500728 NEFMP07197 916 aa17.24■□□□□ 0.35
LRPAP1-202ENST00000500728 NBR1Q14596 966 aa17.2■□□□□ 0.34
LRPAP1-202ENST00000500728 ARID3CA6NKF2 412 aa17.2■□□□□ 0.34
LRPAP1-202ENST00000500728 ARXQ96QS3 562 aa17.18■□□□□ 0.34
LRPAP1-202ENST00000500728 ESF1Q9H501 851 aaKnown RBP17.18■□□□□ 0.34
LRPAP1-202ENST00000500728 HSP90AA1P07900 732 aaKnown RBP17.18■□□□□ 0.34
LRPAP1-202ENST00000500728 FKBP8Q14318 412 aa17.13■□□□□ 0.33
LRPAP1-202ENST00000500728 A0A0G2JS52 829 aa17.12■□□□□ 0.33
LRPAP1-202ENST00000500728 SCAF1Q9H7N4 1312 aaKnown RBP17.11■□□□□ 0.33
LRPAP1-202ENST00000500728 SALL2Q9Y467 1007 aaPredicted RBP17.08■□□□□ 0.32
LRPAP1-202ENST00000500728 STAG3Q9UJ98 1225 aa17.07■□□□□ 0.32
LRPAP1-202ENST00000500728 P3H3Q8IVL6 736 aa17.05■□□□□ 0.32
LRPAP1-202ENST00000500728 UPF2Q9HAU5 1272 aaKnown RBP17■□□□□ 0.31
LRPAP1-202ENST00000500728 ZNF777Q9ULD5 760 aaPredicted RBP17■□□□□ 0.31
LRPAP1-202ENST00000500728 PABPN1Q86U42 306 aaKnown RBP eCLIP16.97■□□□□ 0.31
LRPAP1-202ENST00000500728 CHGAP10645 457 aaKnown RBP16.96■□□□□ 0.3
LRPAP1-202ENST00000500728 PLEKHG5O94827 1062 aa16.94■□□□□ 0.3
LRPAP1-202ENST00000500728 FAM9BQ8IZU0 186 aa16.93■□□□□ 0.3
LRPAP1-202ENST00000500728 HNRNPUQ00839 825 aaKnown RBP eCLIP16.87■□□□□ 0.29
LRPAP1-202ENST00000500728 ZBTB7CA1YPR0 619 aa16.84■□□□□ 0.29
LRPAP1-202ENST00000500728 CCDC136Q96JN2 1154 aa16.84■□□□□ 0.29
LRPAP1-202ENST00000500728 SENP3Q9H4L4 574 aaPredicted RBP16.83■□□□□ 0.28
LRPAP1-202ENST00000500728 CDK11BP21127 795 aaKnown RBP16.81■□□□□ 0.28
LRPAP1-202ENST00000500728 IRX6P78412 446 aaPredicted RBP16.79■□□□□ 0.28
LRPAP1-202ENST00000500728 TNNT2P45379 298 aaPredicted RBP16.79■□□□□ 0.28
LRPAP1-202ENST00000500728 TULP1O00294 542 aaPredicted RBP16.78■□□□□ 0.28
LRPAP1-202ENST00000500728 DDX10Q13206 875 aaKnown RBP16.78■□□□□ 0.28
LRPAP1-202ENST00000500728 TRIM44Q96DX7 344 aaPredicted RBP16.77■□□□□ 0.28
LRPAP1-202ENST00000500728 NPM1P06748 294 aaKnown RBP eCLIP16.75■□□□□ 0.27
LRPAP1-202ENST00000500728 TPRNQ4KMQ1 711 aa16.75■□□□□ 0.27
LRPAP1-202ENST00000500728 ABCC9O60706 1549 aa16.73■□□□□ 0.27
LRPAP1-202ENST00000500728 C14orf37Q86TY3 774 aa16.71■□□□□ 0.27
LRPAP1-202ENST00000500728 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.7■□□□□ 0.264e-8■■□□□ 12.1
LRPAP1-202ENST00000500728 TMC1Q8TDI8 760 aa16.7■□□□□ 0.26
LRPAP1-202ENST00000500728 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.69■□□□□ 0.26
LRPAP1-202ENST00000500728 RTN4Q9NQC3 1192 aaKnown RBP16.69■□□□□ 0.26
LRPAP1-202ENST00000500728 TONSLQ96HA7 1378 aa16.68■□□□□ 0.26
LRPAP1-202ENST00000500728 SENP3-EIF4A1A0A087X0R7 540 aa16.66■□□□□ 0.26
LRPAP1-202ENST00000500728 HAP1P54257 671 aaPredicted RBP16.66■□□□□ 0.26
LRPAP1-202ENST00000500728 KDM2AQ9Y2K7 1162 aa16.65■□□□□ 0.26
LRPAP1-202ENST00000500728 WDR43Q15061 677 aaKnown RBP eCLIP16.65■□□□□ 0.26
LRPAP1-202ENST00000500728 HIRIP3Q9BW71 556 aaPredicted RBP16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 114.2 ms