RNA–Protein interactions for RNA: ENST00000562741.1

MVD-204, Transcript of mevalonate diphosphate decarboxylase, humanhuman

TSL 2

Gene MVD, Length 217 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MVD-204ENST00000562741 NISCHQ9Y2I1 1504 aa53.47■■■■■ 6.15
MVD-204ENST00000562741 ABCC9O60706 1549 aa48.07■■■■■ 5.29
MVD-204ENST00000562741 CCDC180Q9P1Z9 1646 aa48.07■■■■■ 5.29
MVD-204ENST00000562741 RB1CC1Q8TDY2 1594 aa45.77■■■■■ 4.92
MVD-204ENST00000562741 NACADO15069 1562 aa45.44■■■■■ 4.86
MVD-204ENST00000562741 DNAJC5BQ9UF47 199 aa45.12■■■■■ 4.81
MVD-204ENST00000562741 DCAF8L2P0C7V8 631 aa45.1■■■■■ 4.81
MVD-204ENST00000562741 MYO15BQ96JP2 1530 aa44.78■■■■■ 4.76
MVD-204ENST00000562741 UNC13AQ9UPW8 1703 aa44.78■■■■■ 4.76
MVD-204ENST00000562741 PABPN1Q86U42 306 aaKnown RBP eCLIP44.71■■■■■ 4.75
MVD-204ENST00000562741 BICRAQ9NZM4 1560 aa44.43■■■■■ 4.7
MVD-204ENST00000562741 ZCCHC6Q5VYS8 1495 aaKnown RBP44.3■■■■■ 4.68
MVD-204ENST00000562741 DCAF1Q9Y4B6 1507 aa44.18■■■■■ 4.66
MVD-204ENST00000562741 SHROOM4Q9ULL8 1493 aa43.84■■■■■ 4.61
MVD-204ENST00000562741 SCRIBQ14160 1630 aa43.76■■■■■ 4.6
MVD-204ENST00000562741 CC2D2AQ9P2K1 1620 aa43.46■■■■■ 4.55
MVD-204ENST00000562741 EIF4G1Q04637 1599 aaKnown RBP43.34■■■■■ 4.53
MVD-204ENST00000562741 CECR2Q9BXF3 1484 aa43.32■■■■■ 4.53
MVD-204ENST00000562741 NCAPD3P42695 1498 aa41.92■■■■■ 4.3
MVD-204ENST00000562741 ATAD2BQ9ULI0 1458 aa41.78■■■■■ 4.28
MVD-204ENST00000562741 SMARCA4P51532 1647 aa41.75■■■■■ 4.27
MVD-204ENST00000562741 SMARCA2P51531 1590 aa41.69■■■■■ 4.26
MVD-204ENST00000562741 HMGXB3Q12766 1538 aa41.64■■■■■ 4.26
MVD-204ENST00000562741 ERCC6Q03468 1493 aa41.53■■■■■ 4.24
MVD-204ENST00000562741 BAZ1AQ9NRL2 1556 aaPredicted RBP41.52■■■■■ 4.24
MVD-204ENST00000562741 DNAJC5Q9H3Z4 198 aa41.5■■■■■ 4.23
MVD-204ENST00000562741 CUX2O14529 1486 aa41.49■■■■■ 4.23
MVD-204ENST00000562741 BAZ1BQ9UIG0 1483 aaKnown RBP41.38■■■■■ 4.21
MVD-204ENST00000562741 PEG3Q9GZU2 1588 aa41.35■■■■■ 4.21
MVD-204ENST00000562741 NESP48681 1621 aa41.28■■■■■ 4.2
MVD-204ENST00000562741 MROH2BQ7Z745 1585 aa41.19■■■■■ 4.18
MVD-204ENST00000562741 LAMC3Q9Y6N6 1575 aa41.02■■■■■ 4.16
MVD-204ENST00000562741 THOC2Q8NI27 1593 aaKnown RBP40.92■■■■■ 4.14
MVD-204ENST00000562741 KIF21AQ7Z4S6 1674 aa40.8■■■■■ 4.12
MVD-204ENST00000562741 PDS5BQ9NTI5 1447 aa40.76■■■■■ 4.11
MVD-204ENST00000562741 WIZO95785 1651 aa40.72■■■■■ 4.11
MVD-204ENST00000562741 CADPSQ9ULU8 1353 aa40.62■■■■■ 4.09
MVD-204ENST00000562741 MRC2Q9UBG0 1479 aa40.42■■■■■ 4.06
MVD-204ENST00000562741 WDR62O43379 1518 aa40.33■■■■■ 4.05
MVD-204ENST00000562741 RSF1Q96T23 1441 aaPredicted RBP40.29■■■■■ 4.04
MVD-204ENST00000562741 CEP164Q9UPV0 1460 aa40.25■■■■■ 4.03
MVD-204ENST00000562741 TOP2AP11388 1531 aaKnown RBP40.2■■■■■ 4.03
MVD-204ENST00000562741 FANCD2Q9BXW9 1451 aa40.19■■■■■ 4.02
MVD-204ENST00000562741 CFTRP13569 1480 aa40.16■■■■■ 4.02
MVD-204ENST00000562741 URB2Q14146 1524 aaKnown RBP39.86■■■■□ 3.97
MVD-204ENST00000562741 PRDM2Q13029 1718 aa39.85■■■■□ 3.97
MVD-204ENST00000562741 CCDC88BA6NC98 1476 aa39.72■■■■□ 3.95
MVD-204ENST00000562741 TRIM41Q8WV44 630 aa39.65■■■■□ 3.94
MVD-204ENST00000562741 OSCARQ8IYS5 282 aa39.54■■■■□ 3.92
MVD-204ENST00000562741 IFT140Q96RY7 1462 aa39.43■■■■□ 3.9
MVD-204ENST00000562741 TOPBP1Q92547 1522 aa39.43■■■■□ 3.9
MVD-204ENST00000562741 ZNF608Q9ULD9 1512 aaPredicted RBP39.37■■■■□ 3.89
MVD-204ENST00000562741 ABCC8Q09428 1581 aa39.33■■■■□ 3.89
MVD-204ENST00000562741 DNMBPQ6XZF7 1577 aa39.29■■■■□ 3.88
MVD-204ENST00000562741 EIF4G3O43432 1585 aaKnown RBP39.2■■■■□ 3.87
MVD-204ENST00000562741 TARBP1Q13395 1621 aaKnown RBP39.1■■■■□ 3.85
MVD-204ENST00000562741 RIMBP3CA6NJZ7 1639 aa39.09■■■■□ 3.85
MVD-204ENST00000562741 RIMBP3BA6NNM3 1639 aa39.09■■■■□ 3.85
MVD-204ENST00000562741 RIMBP3Q9UFD9 1639 aa39.09■■■■□ 3.85
MVD-204ENST00000562741 POLA1P09884 1462 aaPredicted RBP39.01■■■■□ 3.84
MVD-204ENST00000562741 AQRO60306 1485 aaKnown RBP eCLIP38.99■■■■□ 3.832e-11■■■■■ 33.7
MVD-204ENST00000562741 ARHGEF11O15085 1522 aa38.94■■■■□ 3.82
MVD-204ENST00000562741 CHD1O14646 1710 aa38.94■■■■□ 3.82
MVD-204ENST00000562741 RAD54L2Q9Y4B4 1467 aa38.85■■■■□ 3.81
MVD-204ENST00000562741 SOGA1O94964 1423 aa38.81■■■■□ 3.8
MVD-204ENST00000562741 FGD5Q6ZNL6 1462 aa38.76■■■■□ 3.8
MVD-204ENST00000562741 FBLN2P98095 1184 aa38.74■■■■□ 3.79
MVD-204ENST00000562741 TDRD9Q8NDG6 1382 aaKnown RBP38.73■■■■□ 3.79
MVD-204ENST00000562741 CUX1P39880 1505 aa38.72■■■■□ 3.79
MVD-204ENST00000562741 WDR97A6NE52 1622 aa38.71■■■■□ 3.79
MVD-204ENST00000562741 CYB5RLQ6IPT4 315 aa38.62■■■■□ 3.77
MVD-204ENST00000562741 SNAPC4Q5SXM2 1469 aa38.61■■■■□ 3.77
MVD-204ENST00000562741 ARAP1Q96P48 1450 aa38.55■■■■□ 3.76
MVD-204ENST00000562741 MAGI1Q96QZ7 1491 aaPredicted RBP38.53■■■■□ 3.76
MVD-204ENST00000562741 GRIN2BQ13224 1484 aa38.5■■■■□ 3.75
MVD-204ENST00000562741 CLASP1Q7Z460 1538 aa38.46■■■■□ 3.75
MVD-204ENST00000562741 CHMP7Q8WUX9 453 aaPredicted RBP38.44■■■■□ 3.74
MVD-204ENST00000562741 SYNJ1O43426 1573 aa38.44■■■■□ 3.74
MVD-204ENST00000562741 SUPT5HO00267 1087 aaKnown RBP38.42■■■■□ 3.74
MVD-204ENST00000562741 PBRM1Q86U86 1689 aa38.4■■■■□ 3.74
MVD-204ENST00000562741 SYNJ2O15056 1496 aa38.4■■■■□ 3.74
MVD-204ENST00000562741 GAPVD1Q14C86 1478 aa38.35■■■■□ 3.73
MVD-204ENST00000562741 ABCA10Q8WWZ4 1543 aa38.32■■■■□ 3.72
MVD-204ENST00000562741 ABCA5Q8WWZ7 1642 aa38.3■■■■□ 3.72
MVD-204ENST00000562741 TRHP20396 242 aaPredicted RBP38.21■■■■□ 3.71
MVD-204ENST00000562741 WRNQ14191 1432 aaPredicted RBP eCLIP38.14■■■■□ 3.7
MVD-204ENST00000562741 BIVM-ERCC5R4GMW8 1640 aa38.11■■■■□ 3.69
MVD-204ENST00000562741 TOP2BQ02880 1626 aa38.09■■■■□ 3.69
MVD-204ENST00000562741 GRIN2AQ12879 1464 aa38.02■■■■□ 3.68
MVD-204ENST00000562741 ADAMTS12P58397 1594 aa38.01■■■■□ 3.67
MVD-204ENST00000562741 CEP170Q5SW79 1584 aa37.89■■■■□ 3.66
MVD-204ENST00000562741 NUP160Q12769 1436 aa37.88■■■■□ 3.66
MVD-204ENST00000562741 FHAD1B1AJZ9 1412 aa37.87■■■■□ 3.65
MVD-204ENST00000562741 ERICH3Q5RHP9 1530 aa37.85■■■■□ 3.65
MVD-204ENST00000562741 ERCC6L2Q5T890 1561 aa37.84■■■■□ 3.65
MVD-204ENST00000562741 SHROOM2Q13796 1616 aa37.76■■■■□ 3.64
MVD-204ENST00000562741 PRG4Q92954 1404 aaPredicted RBP37.52■■■■□ 3.6
MVD-204ENST00000562741 RUSC2Q8N2Y8 1516 aa37.48■■■■□ 3.59
MVD-204ENST00000562741 JPH4Q96JJ6 628 aa37.46■■■■□ 3.59
MVD-204ENST00000562741 KIF27Q86VH2 1401 aa37.32■■■■□ 3.56
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms