RNA–Protein interactions for RNA: ENST00000589225.5

USP36-214, Transcript of ubiquitin specific peptidase 36, humanhuman

TSL 1 (best)

Gene USP36, Length 5,885 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP36-214ENST00000589225 DCAF8L2P0C7V8 631 aa25.34■■□□□ 1.65
USP36-214ENST00000589225 NISCHQ9Y2I1 1504 aa24.09■■□□□ 1.45
USP36-214ENST00000589225 SUPT5HO00267 1087 aaKnown RBP23.9■■□□□ 1.42
USP36-214ENST00000589225 SHROOM4Q9ULL8 1493 aa23.58■■□□□ 1.36
USP36-214ENST00000589225 EHMT2Q96KQ7 1210 aa23.22■■□□□ 1.31
USP36-214ENST00000589225 APLP2Q06481 763 aa22.69■■□□□ 1.22
USP36-214ENST00000589225 FAM9AQ8IZU1 332 aaPredicted RBP22.58■■□□□ 1.21
USP36-214ENST00000589225 TTBK1Q5TCY1 1321 aaPredicted RBP22.4■■□□□ 1.18
USP36-214ENST00000589225 PELP1Q8IZL8 1130 aaKnown RBP22.26■■□□□ 1.15
USP36-214ENST00000589225 RANGAP1P46060 587 aaPredicted RBP22.25■■□□□ 1.15
USP36-214ENST00000589225 TRIM41Q8WV44 630 aa22.13■■□□□ 1.13
USP36-214ENST00000589225 PCGF6Q9BYE7 350 aa22.13■■□□□ 1.13
USP36-214ENST00000589225 ATP1B4Q9UN42 357 aaPredicted RBP22.05■■□□□ 1.12
USP36-214ENST00000589225 UBTFP17480 764 aaKnown RBP21.9■■□□□ 1.1
USP36-214ENST00000589225 CCER1Q8TC90 406 aaPredicted RBP21.81■■□□□ 1.08
USP36-214ENST00000589225 ZEB1P37275 1124 aaPredicted RBP21.68■■□□□ 1.06
USP36-214ENST00000589225 CENPBP07199 599 aaPredicted RBP21.57■■□□□ 1.04
USP36-214ENST00000589225 PPARGC1BQ86YN6 1023 aaKnown RBP21.52■■□□□ 1.04
USP36-214ENST00000589225 ERICH6Q7L0X2 663 aa21.38■■□□□ 1.01
USP36-214ENST00000589225 YTHDC1Q96MU7 727 aaKnown RBP21.29■■□□□ 1
USP36-214ENST00000589225 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.29■■□□□ 1
USP36-214ENST00000589225 HNRNPUL2Q1KMD3 747 aaKnown RBP21.29■■□□□ 1
USP36-214ENST00000589225 MYT1LQ9UL68 1186 aa21.24■□□□□ 0.99
USP36-214ENST00000589225 ITGAEP38570 1179 aa21.23■□□□□ 0.99
USP36-214ENST00000589225 NEFLP07196 543 aa21.21■□□□□ 0.99
USP36-214ENST00000589225 TRIM26Q12899 539 aaPredicted RBP21.19■□□□□ 0.98
USP36-214ENST00000589225 LOC105371045A0A1W2PR82 267 aa21.12■□□□□ 0.97
USP36-214ENST00000589225 CHIC1Q5VXU3 224 aa21.04■□□□□ 0.96
USP36-214ENST00000589225 POLR3GLQ9BT43 218 aa21.04■□□□□ 0.96
USP36-214ENST00000589225 ABCC9O60706 1549 aa20.99■□□□□ 0.95
USP36-214ENST00000589225 PABPN1Q86U42 306 aaKnown RBP eCLIP20.97■□□□□ 0.95
USP36-214ENST00000589225 MYT1Q01538 1121 aa20.88■□□□□ 0.93
USP36-214ENST00000589225 CNGB1Q14028 1251 aaPredicted RBP20.83■□□□□ 0.93
USP36-214ENST00000589225 HRCP23327 699 aa20.83■□□□□ 0.93
USP36-214ENST00000589225 FAM50AQ14320 339 aaKnown RBP20.7■□□□□ 0.9
USP36-214ENST00000589225 SLC4A1APQ9BWU0 796 aaKnown RBP20.69■□□□□ 0.9
USP36-214ENST00000589225 DAXXQ9UER7 740 aaPredicted RBP20.59■□□□□ 0.89
USP36-214ENST00000589225 TRIM52Q96A61 297 aa20.58■□□□□ 0.89
USP36-214ENST00000589225 FBLN2P98095 1184 aa20.52■□□□□ 0.88
USP36-214ENST00000589225 NEUROD1Q13562 356 aa20.47■□□□□ 0.87
USP36-214ENST00000589225 DIEXFQ68CQ4 756 aaKnown RBP20.41■□□□□ 0.86
USP36-214ENST00000589225 ZNF326Q5BKZ1 582 aaKnown RBP20.35■□□□□ 0.85
USP36-214ENST00000589225 P3H3Q8IVL6 736 aa20.29■□□□□ 0.84
USP36-214ENST00000589225 ARID3CA6NKF2 412 aa20.29■□□□□ 0.84
USP36-214ENST00000589225 CLSPNQ9HAW4 1339 aa20.27■□□□□ 0.83
USP36-214ENST00000589225 CSRNP3Q8WYN3 585 aa20.17■□□□□ 0.82
USP36-214ENST00000589225 ZNF316A6NFI3 1004 aaPredicted RBP20.14■□□□□ 0.81
USP36-214ENST00000589225 ANP32CO43423 234 aa20.14■□□□□ 0.81
USP36-214ENST00000589225 SCRIBQ14160 1630 aa20.13■□□□□ 0.81
USP36-214ENST00000589225 ZNF777Q9ULD5 760 aaPredicted RBP20.11■□□□□ 0.81
USP36-214ENST00000589225 BCANQ96GW7 911 aa20.08■□□□□ 0.8
USP36-214ENST00000589225 RTL5Q5HYW3 569 aaPredicted RBP20■□□□□ 0.79
USP36-214ENST00000589225 CDK11AQ9UQ88 783 aaPredicted RBP19.99■□□□□ 0.79
USP36-214ENST00000589225 SLC24A1O60721 1099 aa19.97■□□□□ 0.79
USP36-214ENST00000589225 ZBTB47Q9UFB7 747 aaPredicted RBP19.93■□□□□ 0.78
USP36-214ENST00000589225 CANXP27824 592 aaKnown RBP19.9■□□□□ 0.78
USP36-214ENST00000589225 ZCCHC6Q5VYS8 1495 aaKnown RBP19.9■□□□□ 0.78
USP36-214ENST00000589225 NEFMP07197 916 aa19.88■□□□□ 0.77
USP36-214ENST00000589225 BCL11AQ9H165 835 aa19.87■□□□□ 0.77
USP36-214ENST00000589225 GTF3C3Q9Y5Q9 886 aa19.86■□□□□ 0.77
USP36-214ENST00000589225 ESF1Q9H501 851 aaKnown RBP19.85■□□□□ 0.77
USP36-214ENST00000589225 CHGAP10645 457 aaKnown RBP19.8■□□□□ 0.76
USP36-214ENST00000589225 NPM1P06748 294 aaKnown RBP eCLIP19.78■□□□□ 0.76
USP36-214ENST00000589225 PLPPR3Q6T4P5 718 aa19.77■□□□□ 0.75
USP36-214ENST00000589225 STAG3Q9UJ98 1225 aa19.76■□□□□ 0.75
USP36-214ENST00000589225 TONSLQ96HA7 1378 aa19.74■□□□□ 0.75
USP36-214ENST00000589225 CHIC2Q9UKJ5 165 aa19.7■□□□□ 0.74
USP36-214ENST00000589225 CCDC180Q9P1Z9 1646 aa19.66■□□□□ 0.74
USP36-214ENST00000589225 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.66■□□□□ 0.741e-6■■□□□ 12.6
USP36-214ENST00000589225 CHMP7Q8WUX9 453 aaPredicted RBP19.61■□□□□ 0.73
USP36-214ENST00000589225 MTUS2Q5JR59 1369 aa19.55■□□□□ 0.72
USP36-214ENST00000589225 DDX10Q13206 875 aaKnown RBP19.54■□□□□ 0.72
USP36-214ENST00000589225 TSPY4P0CV99 314 aa19.54■□□□□ 0.72
USP36-214ENST00000589225 TSPY10P0CW01 314 aa19.54■□□□□ 0.72
USP36-214ENST00000589225 ACIN1Q9UKV3 1341 aaKnown RBP19.54■□□□□ 0.72
USP36-214ENST00000589225 RB1CC1Q8TDY2 1594 aa19.54■□□□□ 0.72
USP36-214ENST00000589225 DCAF1Q9Y4B6 1507 aa19.52■□□□□ 0.72
USP36-214ENST00000589225 FAM9BQ8IZU0 186 aa19.52■□□□□ 0.72
USP36-214ENST00000589225 HNRNPUQ00839 825 aaKnown RBP eCLIP19.49■□□□□ 0.71
USP36-214ENST00000589225 KDM2AQ9Y2K7 1162 aa19.49■□□□□ 0.71
USP36-214ENST00000589225 NPM2Q86SE8 214 aaKnown RBP19.48■□□□□ 0.71
USP36-214ENST00000589225 SALL2Q9Y467 1007 aaPredicted RBP19.48■□□□□ 0.71
USP36-214ENST00000589225 ANP32AP39687 249 aaKnown RBP19.47■□□□□ 0.71
USP36-214ENST00000589225 CLIP1P30622 1438 aa19.45■□□□□ 0.7
USP36-214ENST00000589225 FKBP8Q14318 412 aa19.44■□□□□ 0.7
USP36-214ENST00000589225 TMC1Q8TDI8 760 aa19.4■□□□□ 0.7
USP36-214ENST00000589225 KCNH8Q96L42 1107 aa19.4■□□□□ 0.7
USP36-214ENST00000589225 RRP7BPQ9NSQ0 103 aa19.38■□□□□ 0.69
USP36-214ENST00000589225 SENP3Q9H4L4 574 aaPredicted RBP19.35■□□□□ 0.69
USP36-214ENST00000589225 WDR43Q15061 677 aaKnown RBP eCLIP19.35■□□□□ 0.69
USP36-214ENST00000589225 RSF1Q96T23 1441 aaPredicted RBP19.35■□□□□ 0.69
USP36-214ENST00000589225 BAZ1BQ9UIG0 1483 aaKnown RBP19.32■□□□□ 0.68
USP36-214ENST00000589225 HIRIP3Q9BW71 556 aaPredicted RBP19.32■□□□□ 0.68
USP36-214ENST00000589225 PLEKHD1A6NEE1 506 aa19.31■□□□□ 0.68
USP36-214ENST00000589225 SCAF1Q9H7N4 1312 aaKnown RBP19.31■□□□□ 0.68
USP36-214ENST00000589225 GOLGA3Q08378 1498 aa19.31■□□□□ 0.68
USP36-214ENST00000589225 MRS2Q9HD23 443 aa19.3■□□□□ 0.68
USP36-214ENST00000589225 HSP90AA1P07900 732 aaKnown RBP19.29■□□□□ 0.68
USP36-214ENST00000589225 WRNQ14191 1432 aaPredicted RBP eCLIP19.27■□□□□ 0.682e-8■■■■■ 75.2
USP36-214ENST00000589225 NACADO15069 1562 aa19.27■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms