RNA–Protein interactions for RNA: ENST00000509198.1

LRPAP1-203, Transcript of LDL receptor related protein associated protein 1, humanhuman

TSL 2

Gene LRPAP1, Length 1,170 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRPAP1-203ENST00000509198 NISCHQ9Y2I1 1504 aa48.5■■■■■ 5.35
LRPAP1-203ENST00000509198 CCDC180Q9P1Z9 1646 aa43.28■■■■■ 4.52
LRPAP1-203ENST00000509198 ABCC9O60706 1549 aa42.7■■■■■ 4.43
LRPAP1-203ENST00000509198 RB1CC1Q8TDY2 1594 aa40.95■■■■■ 4.15
LRPAP1-203ENST00000509198 NACADO15069 1562 aa40.82■■■■■ 4.12
LRPAP1-203ENST00000509198 DCAF8L2P0C7V8 631 aa40.76■■■■■ 4.12
LRPAP1-203ENST00000509198 MYO15BQ96JP2 1530 aa40.45■■■■■ 4.07
LRPAP1-203ENST00000509198 ZCCHC6Q5VYS8 1495 aaKnown RBP40.32■■■■■ 4.04
LRPAP1-203ENST00000509198 DCAF1Q9Y4B6 1507 aa40.13■■■■■ 4.01
LRPAP1-203ENST00000509198 UNC13AQ9UPW8 1703 aa39.87■■■■□ 3.97
LRPAP1-203ENST00000509198 PABPN1Q86U42 306 aaKnown RBP eCLIP39.84■■■■□ 3.97
LRPAP1-203ENST00000509198 BICRAQ9NZM4 1560 aa39.62■■■■□ 3.93
LRPAP1-203ENST00000509198 DNAJC5BQ9UF47 199 aa39.45■■■■□ 3.91
LRPAP1-203ENST00000509198 SCRIBQ14160 1630 aa39.44■■■■□ 3.9
LRPAP1-203ENST00000509198 SHROOM4Q9ULL8 1493 aa39.3■■■■□ 3.88
LRPAP1-203ENST00000509198 EIF4G1Q04637 1599 aaKnown RBP38.66■■■■□ 3.78
LRPAP1-203ENST00000509198 CC2D2AQ9P2K1 1620 aa38.59■■■■□ 3.77
LRPAP1-203ENST00000509198 CECR2Q9BXF3 1484 aa38.43■■■■□ 3.74
LRPAP1-203ENST00000509198 SMARCA4P51532 1647 aa37.69■■■■□ 3.62
LRPAP1-203ENST00000509198 BAZ1AQ9NRL2 1556 aaPredicted RBP37.66■■■■□ 3.62
LRPAP1-203ENST00000509198 NCAPD3P42695 1498 aa37.65■■■■□ 3.62
LRPAP1-203ENST00000509198 ATAD2BQ9ULI0 1458 aa37.6■■■■□ 3.61
LRPAP1-203ENST00000509198 SMARCA2P51531 1590 aa37.59■■■■□ 3.61
LRPAP1-203ENST00000509198 HMGXB3Q12766 1538 aa37.43■■■■□ 3.58
LRPAP1-203ENST00000509198 PEG3Q9GZU2 1588 aa37.34■■■■□ 3.57
LRPAP1-203ENST00000509198 MROH2BQ7Z745 1585 aa37.34■■■■□ 3.57
LRPAP1-203ENST00000509198 BAZ1BQ9UIG0 1483 aaKnown RBP37.32■■■■□ 3.56
LRPAP1-203ENST00000509198 WIZO95785 1651 aa36.9■■■■□ 3.5
LRPAP1-203ENST00000509198 ERCC6Q03468 1493 aa36.9■■■■□ 3.5
LRPAP1-203ENST00000509198 RSF1Q96T23 1441 aaPredicted RBP36.81■■■■□ 3.48
LRPAP1-203ENST00000509198 NESP48681 1621 aa36.8■■■■□ 3.48
LRPAP1-203ENST00000509198 LAMC3Q9Y6N6 1575 aa36.72■■■■□ 3.47
LRPAP1-203ENST00000509198 CUX2O14529 1486 aa36.62■■■■□ 3.45
LRPAP1-203ENST00000509198 TOP2AP11388 1531 aaKnown RBP36.54■■■■□ 3.44
LRPAP1-203ENST00000509198 CADPSQ9ULU8 1353 aa36.54■■■■□ 3.44
LRPAP1-203ENST00000509198 PDS5BQ9NTI5 1447 aa36.53■■■■□ 3.44
LRPAP1-203ENST00000509198 KIF21AQ7Z4S6 1674 aa36.34■■■■□ 3.41
LRPAP1-203ENST00000509198 THOC2Q8NI27 1593 aaKnown RBP36.32■■■■□ 3.4
LRPAP1-203ENST00000509198 CFTRP13569 1480 aa36.24■■■■□ 3.39
LRPAP1-203ENST00000509198 MRC2Q9UBG0 1479 aa36.14■■■■□ 3.38
LRPAP1-203ENST00000509198 CEP164Q9UPV0 1460 aa36.13■■■■□ 3.37
LRPAP1-203ENST00000509198 FANCD2Q9BXW9 1451 aa36.12■■■■□ 3.37
LRPAP1-203ENST00000509198 CCDC88BA6NC98 1476 aa36.11■■■■□ 3.37
LRPAP1-203ENST00000509198 WDR62O43379 1518 aa36■■■■□ 3.35
LRPAP1-203ENST00000509198 DNAJC5Q9H3Z4 198 aa35.91■■■■□ 3.34
LRPAP1-203ENST00000509198 PRDM2Q13029 1718 aa35.88■■■■□ 3.33
LRPAP1-203ENST00000509198 URB2Q14146 1524 aaKnown RBP35.74■■■■□ 3.31
LRPAP1-203ENST00000509198 SUPT5HO00267 1087 aaKnown RBP35.67■■■■□ 3.3
LRPAP1-203ENST00000509198 ABCC8Q09428 1581 aa35.54■■■■□ 3.28
LRPAP1-203ENST00000509198 TOPBP1Q92547 1522 aa35.48■■■■□ 3.27
LRPAP1-203ENST00000509198 DNMBPQ6XZF7 1577 aa35.42■■■■□ 3.26
LRPAP1-203ENST00000509198 IFT140Q96RY7 1462 aa35.39■■■■□ 3.26
LRPAP1-203ENST00000509198 ZNF608Q9ULD9 1512 aaPredicted RBP35.2■■■■□ 3.23
LRPAP1-203ENST00000509198 POLA1P09884 1462 aaPredicted RBP35.16■■■■□ 3.22
LRPAP1-203ENST00000509198 TARBP1Q13395 1621 aaKnown RBP35.09■■■■□ 3.21
LRPAP1-203ENST00000509198 OSCARQ8IYS5 282 aa35.08■■■■□ 3.21
LRPAP1-203ENST00000509198 CUX1P39880 1505 aa35.06■■■■□ 3.2
LRPAP1-203ENST00000509198 EIF4G3O43432 1585 aaKnown RBP35.05■■■■□ 3.2
LRPAP1-203ENST00000509198 SOGA1O94964 1423 aa35.05■■■■□ 3.2
LRPAP1-203ENST00000509198 FGD5Q6ZNL6 1462 aa35.03■■■■□ 3.2
LRPAP1-203ENST00000509198 RAD54L2Q9Y4B4 1467 aa34.99■■■■□ 3.19
LRPAP1-203ENST00000509198 AQRO60306 1485 aaKnown RBP eCLIP34.97■■■■□ 3.19
LRPAP1-203ENST00000509198 TDRD9Q8NDG6 1382 aaKnown RBP34.88■■■■□ 3.17
LRPAP1-203ENST00000509198 WDR97A6NE52 1622 aa34.86■■■■□ 3.17
LRPAP1-203ENST00000509198 WRNQ14191 1432 aaPredicted RBP eCLIP34.76■■■■□ 3.16
LRPAP1-203ENST00000509198 FBLN2P98095 1184 aa34.72■■■■□ 3.15
LRPAP1-203ENST00000509198 GRIN2BQ13224 1484 aa34.69■■■■□ 3.14
LRPAP1-203ENST00000509198 TOP2BQ02880 1626 aa34.69■■■■□ 3.14
LRPAP1-203ENST00000509198 ABCA10Q8WWZ4 1543 aa34.68■■■■□ 3.14
LRPAP1-203ENST00000509198 BIVM-ERCC5R4GMW8 1640 aa34.66■■■■□ 3.14
LRPAP1-203ENST00000509198 SNAPC4Q5SXM2 1469 aa34.65■■■■□ 3.14
LRPAP1-203ENST00000509198 CHD1O14646 1710 aa34.64■■■■□ 3.14
LRPAP1-203ENST00000509198 MAGI1Q96QZ7 1491 aaPredicted RBP34.64■■■■□ 3.14
LRPAP1-203ENST00000509198 GAPVD1Q14C86 1478 aa34.63■■■■□ 3.13
LRPAP1-203ENST00000509198 SYNJ1O43426 1573 aa34.62■■■■□ 3.13
LRPAP1-203ENST00000509198 TRIM41Q8WV44 630 aa34.59■■■■□ 3.13
LRPAP1-203ENST00000509198 CHMP7Q8WUX9 453 aaPredicted RBP34.57■■■■□ 3.12
LRPAP1-203ENST00000509198 ABCA5Q8WWZ7 1642 aa34.54■■■■□ 3.12
LRPAP1-203ENST00000509198 PBRM1Q86U86 1689 aa34.51■■■■□ 3.12
LRPAP1-203ENST00000509198 SYNJ2O15056 1496 aa34.51■■■■□ 3.11
LRPAP1-203ENST00000509198 RIMBP3CA6NJZ7 1639 aa34.44■■■■□ 3.1
LRPAP1-203ENST00000509198 RIMBP3BA6NNM3 1639 aa34.44■■■■□ 3.1
LRPAP1-203ENST00000509198 RIMBP3Q9UFD9 1639 aa34.44■■■■□ 3.1
LRPAP1-203ENST00000509198 ARHGEF11O15085 1522 aa34.43■■■■□ 3.1
LRPAP1-203ENST00000509198 CLASP1Q7Z460 1538 aa34.29■■■■□ 3.08
LRPAP1-203ENST00000509198 ERICH3Q5RHP9 1530 aa34.28■■■■□ 3.08
LRPAP1-203ENST00000509198 ADAMTS12P58397 1594 aa34.23■■■■□ 3.07
LRPAP1-203ENST00000509198 FHAD1B1AJZ9 1412 aa34.23■■■■□ 3.07
LRPAP1-203ENST00000509198 GRIN2AQ12879 1464 aa34.21■■■■□ 3.07
LRPAP1-203ENST00000509198 CYB5RLQ6IPT4 315 aa34.18■■■■□ 3.06
LRPAP1-203ENST00000509198 ARAP1Q96P48 1450 aa34.1■■■■□ 3.05
LRPAP1-203ENST00000509198 KIF27Q86VH2 1401 aa34.1■■■■□ 3.05
LRPAP1-203ENST00000509198 NUP160Q12769 1436 aa34.06■■■■□ 3.04
LRPAP1-203ENST00000509198 CEP170Q5SW79 1584 aa34.01■■■■□ 3.03
LRPAP1-203ENST00000509198 IGF1RP08069 1367 aa33.95■■■■□ 3.02
LRPAP1-203ENST00000509198 CUL7Q14999 1698 aa33.89■■■■□ 3.02
LRPAP1-203ENST00000509198 SHROOM2Q13796 1616 aa33.82■■■■□ 3
LRPAP1-203ENST00000509198 CARMIL1Q5VZK9 1371 aa33.76■■■■□ 3
LRPAP1-203ENST00000509198 JPH4Q96JJ6 628 aa33.76■■■□□ 2.99
LRPAP1-203ENST00000509198 RUSC2Q8N2Y8 1516 aa33.74■■■□□ 2.99
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms