RNA–Protein interactions for RNA: ENST00000515119.5

LRPAP1-204, Transcript of LDL receptor related protein associated protein 1, humanhuman

TSL 2

Gene LRPAP1, Length 1,167 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRPAP1-204ENST00000515119 NISCHQ9Y2I1 1504 aa39.7■■■■□ 3.95
LRPAP1-204ENST00000515119 ABCC9O60706 1549 aa36.8■■■■□ 3.48
LRPAP1-204ENST00000515119 CCDC180Q9P1Z9 1646 aa35.96■■■■□ 3.35
LRPAP1-204ENST00000515119 DNAJC5BQ9UF47 199 aa35.31■■■■□ 3.24
LRPAP1-204ENST00000515119 RB1CC1Q8TDY2 1594 aa34.62■■■■□ 3.13
LRPAP1-204ENST00000515119 NACADO15069 1562 aa34.19■■■■□ 3.06
LRPAP1-204ENST00000515119 PABPN1Q86U42 306 aaKnown RBP eCLIP34.16■■■■□ 3.06
LRPAP1-204ENST00000515119 DCAF8L2P0C7V8 631 aa33.92■■■■□ 3.02
LRPAP1-204ENST00000515119 UNC13AQ9UPW8 1703 aa33.9■■■■□ 3.02
LRPAP1-204ENST00000515119 BICRAQ9NZM4 1560 aa33.69■■■□□ 2.98
LRPAP1-204ENST00000515119 MYO15BQ96JP2 1530 aa33.44■■■□□ 2.94
LRPAP1-204ENST00000515119 CECR2Q9BXF3 1484 aa33.22■■■□□ 2.91
LRPAP1-204ENST00000515119 CC2D2AQ9P2K1 1620 aa33.19■■■□□ 2.9
LRPAP1-204ENST00000515119 SHROOM4Q9ULL8 1493 aa33.07■■■□□ 2.88
LRPAP1-204ENST00000515119 DNAJC5Q9H3Z4 198 aa32.99■■■□□ 2.87
LRPAP1-204ENST00000515119 EIF4G1Q04637 1599 aaKnown RBP32.91■■■□□ 2.86
LRPAP1-204ENST00000515119 SCRIBQ14160 1630 aa32.73■■■□□ 2.83
LRPAP1-204ENST00000515119 DCAF1Q9Y4B6 1507 aa32.72■■■□□ 2.83
LRPAP1-204ENST00000515119 ZCCHC6Q5VYS8 1495 aaKnown RBP32.71■■■□□ 2.83
LRPAP1-204ENST00000515119 CUX2O14529 1486 aa32.01■■■□□ 2.71
LRPAP1-204ENST00000515119 ERCC6Q03468 1493 aa31.8■■■□□ 2.68
LRPAP1-204ENST00000515119 NCAPD3P42695 1498 aa31.6■■■□□ 2.65
LRPAP1-204ENST00000515119 NESP48681 1621 aa31.39■■■□□ 2.62
LRPAP1-204ENST00000515119 ATAD2BQ9ULI0 1458 aa31.39■■■□□ 2.62
LRPAP1-204ENST00000515119 HMGXB3Q12766 1538 aa31.26■■■□□ 2.59
LRPAP1-204ENST00000515119 SMARCA2P51531 1590 aa31.23■■■□□ 2.59
LRPAP1-204ENST00000515119 THOC2Q8NI27 1593 aaKnown RBP31.2■■■□□ 2.58
LRPAP1-204ENST00000515119 TRIM41Q8WV44 630 aa31.19■■■□□ 2.58
LRPAP1-204ENST00000515119 SMARCA4P51532 1647 aa31.14■■■□□ 2.58
LRPAP1-204ENST00000515119 BAZ1BQ9UIG0 1483 aaKnown RBP31.02■■■□□ 2.56
LRPAP1-204ENST00000515119 LAMC3Q9Y6N6 1575 aa31■■■□□ 2.55
LRPAP1-204ENST00000515119 KIF21AQ7Z4S6 1674 aa30.95■■■□□ 2.55
LRPAP1-204ENST00000515119 BAZ1AQ9NRL2 1556 aaPredicted RBP30.85■■■□□ 2.53
LRPAP1-204ENST00000515119 PDS5BQ9NTI5 1447 aa30.85■■■□□ 2.53
LRPAP1-204ENST00000515119 PEG3Q9GZU2 1588 aa30.84■■■□□ 2.53
LRPAP1-204ENST00000515119 MRC2Q9UBG0 1479 aa30.63■■■□□ 2.49
LRPAP1-204ENST00000515119 MROH2BQ7Z745 1585 aa30.6■■■□□ 2.49
LRPAP1-204ENST00000515119 CADPSQ9ULU8 1353 aa30.6■■■□□ 2.49
LRPAP1-204ENST00000515119 WDR62O43379 1518 aa30.58■■■□□ 2.49
LRPAP1-204ENST00000515119 OSCARQ8IYS5 282 aa30.47■■■□□ 2.47
LRPAP1-204ENST00000515119 CEP164Q9UPV0 1460 aa30.34■■■□□ 2.45
LRPAP1-204ENST00000515119 FANCD2Q9BXW9 1451 aa30.25■■■□□ 2.43
LRPAP1-204ENST00000515119 WIZO95785 1651 aa30.2■■■□□ 2.43
LRPAP1-204ENST00000515119 RIMBP3CA6NJZ7 1639 aa30.14■■■□□ 2.41
LRPAP1-204ENST00000515119 RIMBP3BA6NNM3 1639 aa30.14■■■□□ 2.41
LRPAP1-204ENST00000515119 RIMBP3Q9UFD9 1639 aa30.14■■■□□ 2.41
LRPAP1-204ENST00000515119 CFTRP13569 1480 aa30.08■■■□□ 2.41
LRPAP1-204ENST00000515119 URB2Q14146 1524 aaKnown RBP30.06■■■□□ 2.4
LRPAP1-204ENST00000515119 ARHGEF11O15085 1522 aa29.95■■■□□ 2.38
LRPAP1-204ENST00000515119 ZNF608Q9ULD9 1512 aaPredicted RBP29.84■■■□□ 2.37
LRPAP1-204ENST00000515119 CYB5RLQ6IPT4 315 aa29.82■■■□□ 2.36
LRPAP1-204ENST00000515119 IFT140Q96RY7 1462 aa29.77■■■□□ 2.36
LRPAP1-204ENST00000515119 TRHP20396 242 aaPredicted RBP29.75■■■□□ 2.35
LRPAP1-204ENST00000515119 TOP2AP11388 1531 aaKnown RBP29.72■■■□□ 2.35
LRPAP1-204ENST00000515119 PRDM2Q13029 1718 aa29.71■■■□□ 2.35
LRPAP1-204ENST00000515119 RSF1Q96T23 1441 aaPredicted RBP29.67■■■□□ 2.34
LRPAP1-204ENST00000515119 ARAP1Q96P48 1450 aa29.61■■■□□ 2.33
LRPAP1-204ENST00000515119 EIF4G3O43432 1585 aaKnown RBP29.6■■■□□ 2.33
LRPAP1-204ENST00000515119 TOPBP1Q92547 1522 aa29.59■■■□□ 2.33
LRPAP1-204ENST00000515119 CHD1O14646 1710 aa29.57■■■□□ 2.32
LRPAP1-204ENST00000515119 AQRO60306 1485 aaKnown RBP eCLIP29.47■■■□□ 2.31
LRPAP1-204ENST00000515119 AEBP2Q6ZN18 517 aaPredicted RBP29.46■■■□□ 2.31
LRPAP1-204ENST00000515119 ABCC8Q09428 1581 aa29.45■■■□□ 2.31
LRPAP1-204ENST00000515119 FBLN2P98095 1184 aa29.45■■■□□ 2.31
LRPAP1-204ENST00000515119 CCDC88BA6NC98 1476 aa29.42■■■□□ 2.3
LRPAP1-204ENST00000515119 TARBP1Q13395 1621 aaKnown RBP29.4■■■□□ 2.3
LRPAP1-204ENST00000515119 DNMBPQ6XZF7 1577 aa29.39■■■□□ 2.3
LRPAP1-204ENST00000515119 POLA1P09884 1462 aaPredicted RBP29.23■■■□□ 2.27
LRPAP1-204ENST00000515119 CLASP1Q7Z460 1538 aa29.18■■■□□ 2.26
LRPAP1-204ENST00000515119 TDRD9Q8NDG6 1382 aaKnown RBP29.17■■■□□ 2.26
LRPAP1-204ENST00000515119 RAD54L2Q9Y4B4 1467 aa29.17■■■□□ 2.26
LRPAP1-204ENST00000515119 SNAPC4Q5SXM2 1469 aa29.11■■■□□ 2.25
LRPAP1-204ENST00000515119 SOGA1O94964 1423 aa29.1■■■□□ 2.25
LRPAP1-204ENST00000515119 CHMP7Q8WUX9 453 aaPredicted RBP29.09■■■□□ 2.25
LRPAP1-204ENST00000515119 SYNJ1O43426 1573 aa29.08■■■□□ 2.25
LRPAP1-204ENST00000515119 MAGI1Q96QZ7 1491 aaPredicted RBP28.99■■■□□ 2.23
LRPAP1-204ENST00000515119 WDR97A6NE52 1622 aa28.99■■■□□ 2.23
LRPAP1-204ENST00000515119 GAPVD1Q14C86 1478 aa28.94■■■□□ 2.22
LRPAP1-204ENST00000515119 FGD5Q6ZNL6 1462 aa28.94■■■□□ 2.22
LRPAP1-204ENST00000515119 SYNJ2O15056 1496 aa28.92■■■□□ 2.22
LRPAP1-204ENST00000515119 GRIN2BQ13224 1484 aa28.91■■■□□ 2.22
LRPAP1-204ENST00000515119 CUX1P39880 1505 aa28.79■■■□□ 2.2
LRPAP1-204ENST00000515119 PBRM1Q86U86 1689 aa28.76■■■□□ 2.19
LRPAP1-204ENST00000515119 ERCC6L2Q5T890 1561 aa28.71■■■□□ 2.19
LRPAP1-204ENST00000515119 ABCA5Q8WWZ7 1642 aa28.58■■■□□ 2.17
LRPAP1-204ENST00000515119 KIF13AQ9H1H9 1805 aa28.57■■■□□ 2.16
LRPAP1-204ENST00000515119 CEP170Q5SW79 1584 aa28.56■■■□□ 2.16
LRPAP1-204ENST00000515119 ABCA10Q8WWZ4 1543 aa28.55■■■□□ 2.16
LRPAP1-204ENST00000515119 GRIN2AQ12879 1464 aa28.55■■■□□ 2.16
LRPAP1-204ENST00000515119 NUP160Q12769 1436 aa28.49■■■□□ 2.15
LRPAP1-204ENST00000515119 SHROOM2Q13796 1616 aa28.46■■■□□ 2.15
LRPAP1-204ENST00000515119 ADAMTS12P58397 1594 aa28.41■■■□□ 2.14
LRPAP1-204ENST00000515119 FAM69CQ0P6D2 419 aa28.33■■■□□ 2.13
LRPAP1-204ENST00000515119 FHAD1B1AJZ9 1412 aa28.32■■■□□ 2.12
LRPAP1-204ENST00000515119 PRG4Q92954 1404 aaPredicted RBP28.3■■■□□ 2.12
LRPAP1-204ENST00000515119 KDM4FA0A1W2PPD8 638 aa28.3■■■□□ 2.12
LRPAP1-204ENST00000515119 ABCC10Q5T3U5 1492 aa28.29■■■□□ 2.12
LRPAP1-204ENST00000515119 ILDR1Q86SU0 546 aaPredicted RBP28.29■■■□□ 2.12
LRPAP1-204ENST00000515119 WRNQ14191 1432 aaPredicted RBP eCLIP28.28■■■□□ 2.12
LRPAP1-204ENST00000515119 JPH4Q96JJ6 628 aa28.23■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms