RNA–Protein interactions for RNA: ENST00000466437.1

PDK1-209, Transcript of pyruvate dehydrogenase kinase 1, humanhuman

TSL 4

Gene PDK1, Length 599 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDK1-209ENST00000466437 AEBP2Q6ZN18 517 aaPredicted RBP25.15■■□□□ 1.62
PDK1-209ENST00000466437 CHIC1Q5VXU3 224 aa23.6■■□□□ 1.37
PDK1-209ENST00000466437 SENP3Q9H4L4 574 aaPredicted RBP21.52■■□□□ 1.04
PDK1-209ENST00000466437 PHF23Q9BUL5 403 aaPredicted RBP21.16■□□□□ 0.98
PDK1-209ENST00000466437 NISCHQ9Y2I1 1504 aa20.6■□□□□ 0.89
PDK1-209ENST00000466437 FOXD1Q16676 465 aa20.07■□□□□ 0.8
PDK1-209ENST00000466437 ABCC9O60706 1549 aa19.06■□□□□ 0.64
PDK1-209ENST00000466437 POTEDQ86YR6 584 aa18.95■□□□□ 0.62
PDK1-209ENST00000466437 MSH5O43196 834 aa18.91■□□□□ 0.62
PDK1-209ENST00000466437 PLPPR3Q6T4P5 718 aa18.73■□□□□ 0.59
PDK1-209ENST00000466437 PIAS4Q8N2W9 510 aaPredicted RBP18.71■□□□□ 0.59
PDK1-209ENST00000466437 CCDC180Q9P1Z9 1646 aa18.65■□□□□ 0.58
PDK1-209ENST00000466437 PPP6R1Q9UPN7 881 aa18.53■□□□□ 0.56
PDK1-209ENST00000466437 ADRA2BP18089 450 aa18.46■□□□□ 0.55
PDK1-209ENST00000466437 DNAJC5BQ9UF47 199 aa18.24■□□□□ 0.51
PDK1-209ENST00000466437 RB1CC1Q8TDY2 1594 aa17.91■□□□□ 0.46
PDK1-209ENST00000466437 NACADO15069 1562 aa17.69■□□□□ 0.42
PDK1-209ENST00000466437 PABPN1Q86U42 306 aaKnown RBP eCLIP17.67■□□□□ 0.42
PDK1-209ENST00000466437 UNC13AQ9UPW8 1703 aa17.6■□□□□ 0.41
PDK1-209ENST00000466437 DCAF8L2P0C7V8 631 aa17.5■□□□□ 0.39
PDK1-209ENST00000466437 BICRAQ9NZM4 1560 aa17.49■□□□□ 0.39
PDK1-209ENST00000466437 MYO15BQ96JP2 1530 aa17.3■□□□□ 0.36
PDK1-209ENST00000466437 CC2D2AQ9P2K1 1620 aa17.2■□□□□ 0.34
PDK1-209ENST00000466437 CECR2Q9BXF3 1484 aa17.18■□□□□ 0.34
PDK1-209ENST00000466437 SHROOM4Q9ULL8 1493 aa17.1■□□□□ 0.33
PDK1-209ENST00000466437 EIF4G1Q04637 1599 aaKnown RBP17.06■□□□□ 0.32
PDK1-209ENST00000466437 SCRIBQ14160 1630 aa17.03■□□□□ 0.32
PDK1-209ENST00000466437 MAPK8IP2Q13387 824 aaPredicted RBP17.03■□□□□ 0.32
PDK1-209ENST00000466437 ZCCHC6Q5VYS8 1495 aaKnown RBP17.01■□□□□ 0.31
PDK1-209ENST00000466437 DMRT2Q9Y5R5 561 aa17.01■□□□□ 0.31
PDK1-209ENST00000466437 DCAF1Q9Y4B6 1507 aa16.96■□□□□ 0.3
PDK1-209ENST00000466437 DNAJC5Q9H3Z4 198 aa16.94■□□□□ 0.3
PDK1-209ENST00000466437 SCAF1Q9H7N4 1312 aaKnown RBP16.88■□□□□ 0.29
PDK1-209ENST00000466437 CUX2O14529 1486 aa16.52■□□□□ 0.23
PDK1-209ENST00000466437 ERCC6Q03468 1493 aa16.43■□□□□ 0.22
PDK1-209ENST00000466437 CACNB1Q02641 598 aaPredicted RBP16.39■□□□□ 0.21
PDK1-209ENST00000466437 PPP4R3CPQ6ZMV5 832 aa16.37■□□□□ 0.21
PDK1-209ENST00000466437 NCAPD3P42695 1498 aa16.34■□□□□ 0.21
PDK1-209ENST00000466437 DCAF8L1A6NGE4 600 aa16.33■□□□□ 0.2
PDK1-209ENST00000466437 NESP48681 1621 aa16.3■□□□□ 0.2
PDK1-209ENST00000466437 ATAD2BQ9ULI0 1458 aa16.27■□□□□ 0.19
PDK1-209ENST00000466437 HOXD11P31277 338 aaPredicted RBP16.25■□□□□ 0.19
PDK1-209ENST00000466437 THOC2Q8NI27 1593 aaKnown RBP16.21■□□□□ 0.18
PDK1-209ENST00000466437 HMGXB3Q12766 1538 aa16.2■□□□□ 0.18
PDK1-209ENST00000466437 SMARCA4P51532 1647 aa16.18■□□□□ 0.18
PDK1-209ENST00000466437 SMARCA2P51531 1590 aa16.17■□□□□ 0.18
PDK1-209ENST00000466437 CNKSR2Q8WXI2 1034 aa16.13■□□□□ 0.17
PDK1-209ENST00000466437 RNF39Q9H2S5 420 aa16.1■□□□□ 0.17
PDK1-209ENST00000466437 BAZ1BQ9UIG0 1483 aaKnown RBP16.08■□□□□ 0.16
PDK1-209ENST00000466437 TRIM41Q8WV44 630 aa16.07■□□□□ 0.16
PDK1-209ENST00000466437 KIF21AQ7Z4S6 1674 aa16.07■□□□□ 0.16
PDK1-209ENST00000466437 RNF216Q9NWF9 866 aaPredicted RBP16.06■□□□□ 0.16
PDK1-209ENST00000466437 LAMC3Q9Y6N6 1575 aa16.04■□□□□ 0.16
PDK1-209ENST00000466437 BAZ1AQ9NRL2 1556 aaPredicted RBP16■□□□□ 0.15
PDK1-209ENST00000466437 PEG3Q9GZU2 1588 aa15.99■□□□□ 0.15
PDK1-209ENST00000466437 PDS5BQ9NTI5 1447 aa15.93■□□□□ 0.14
PDK1-209ENST00000466437 MROH2BQ7Z745 1585 aa15.91■□□□□ 0.14
PDK1-209ENST00000466437 MRC2Q9UBG0 1479 aa15.86■□□□□ 0.13
PDK1-209ENST00000466437 WDR62O43379 1518 aa15.85■□□□□ 0.13
PDK1-209ENST00000466437 C1QBPQ07021 282 aaKnown RBP15.85■□□□□ 0.13
PDK1-209ENST00000466437 CADPSQ9ULU8 1353 aa15.82■□□□□ 0.12
PDK1-209ENST00000466437 CEP164Q9UPV0 1460 aa15.71■□□□□ 0.11
PDK1-209ENST00000466437 WIZO95785 1651 aa15.71■□□□□ 0.11
PDK1-209ENST00000466437 FANCD2Q9BXW9 1451 aa15.67■□□□□ 0.1
PDK1-209ENST00000466437 NCBP3Q53F19 620 aaKnown RBP15.65■□□□□ 0.1
PDK1-209ENST00000466437 OSCARQ8IYS5 282 aa15.65■□□□□ 0.1
PDK1-209ENST00000466437 URB2Q14146 1524 aaKnown RBP15.61■□□□□ 0.09
PDK1-209ENST00000466437 RIMBP3CA6NJZ7 1639 aa15.61■□□□□ 0.09
PDK1-209ENST00000466437 RIMBP3BA6NNM3 1639 aa15.61■□□□□ 0.09
PDK1-209ENST00000466437 RIMBP3Q9UFD9 1639 aa15.61■□□□□ 0.09
PDK1-209ENST00000466437 CFTRP13569 1480 aa15.58■□□□□ 0.08
PDK1-209ENST00000466437 ARHGEF11O15085 1522 aa15.5■□□□□ 0.07
PDK1-209ENST00000466437 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.5■□□□□ 0.073e-8■□□□□ 9.7
PDK1-209ENST00000466437 ZNF608Q9ULD9 1512 aaPredicted RBP15.49■□□□□ 0.07
PDK1-209ENST00000466437 TOP2AP11388 1531 aaKnown RBP15.45■□□□□ 0.06
PDK1-209ENST00000466437 NPM3O75607 178 aaKnown RBP15.45■□□□□ 0.06
PDK1-209ENST00000466437 PRDM2Q13029 1718 aa15.42■□□□□ 0.06
PDK1-209ENST00000466437 RSF1Q96T23 1441 aaPredicted RBP15.41■□□□□ 0.06
PDK1-209ENST00000466437 IFT140Q96RY7 1462 aa15.4■□□□□ 0.06
PDK1-209ENST00000466437 EIF4G3O43432 1585 aaKnown RBP15.37■□□□□ 0.05
PDK1-209ENST00000466437 CYB5RLQ6IPT4 315 aa15.36■□□□□ 0.05
PDK1-209ENST00000466437 ARAP1Q96P48 1450 aa15.35■□□□□ 0.05
PDK1-209ENST00000466437 TOPBP1Q92547 1522 aa15.35■□□□□ 0.05
PDK1-209ENST00000466437 CHD1O14646 1710 aa15.34■□□□□ 0.05
PDK1-209ENST00000466437 TRHP20396 242 aaPredicted RBP15.29■□□□□ 0.04
PDK1-209ENST00000466437 CCDC88BA6NC98 1476 aa15.27■□□□□ 0.04
PDK1-209ENST00000466437 AQRO60306 1485 aaKnown RBP eCLIP15.27■□□□□ 0.036e-10■□□□□ 11.1
PDK1-209ENST00000466437 TARBP1Q13395 1621 aaKnown RBP15.25■□□□□ 0.03
PDK1-209ENST00000466437 DNMBPQ6XZF7 1577 aa15.25■□□□□ 0.03
PDK1-209ENST00000466437 FBLN2P98095 1184 aa15.19■□□□□ 0.02
PDK1-209ENST00000466437 ABCC8Q09428 1581 aa15.19■□□□□ 0.02
PDK1-209ENST00000466437 POLA1P09884 1462 aaPredicted RBP15.17■□□□□ 0.02
PDK1-209ENST00000466437 U3KPZ7 1027 aaPredicted RBP15.15■□□□□ 0.02
PDK1-209ENST00000466437 RAD54L2Q9Y4B4 1467 aa15.14■□□□□ 0.01
PDK1-209ENST00000466437 CLASP1Q7Z460 1538 aa15.14■□□□□ 0.01
PDK1-209ENST00000466437 SNAPC4Q5SXM2 1469 aa15.11■□□□□ 0.01
PDK1-209ENST00000466437 TDRD9Q8NDG6 1382 aaKnown RBP15.11■□□□□ 0.01
PDK1-209ENST00000466437 SOGA1O94964 1423 aa15.05■□□□□ -0
PDK1-209ENST00000466437 SYNJ1O43426 1573 aa15.05■□□□□ -0
PDK1-209ENST00000466437 FGD5Q6ZNL6 1462 aa15.02■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms