Protein–RNA interactions for Protein: P26368

U2AF2, Splicing factor U2AF 65 kDa subunit, humanhuman

Known RBP eCLIP

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF2P26368 RACGAP1-226ENST00000552157 386 ntTSL 35.97□□□□□ -1.459e-7■■□□□ 11.7
U2AF2P26368 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.629e-7■■□□□ 11.7
U2AF2P26368 RBM25-211ENST00000532483 1052 ntTSL 57.06□□□□□ -1.281e-9■■□□□ 11.7
U2AF2P26368 RBM25-206ENST00000527449 3469 ntTSL 1 (best)3.78□□□□□ -1.811e-9■■□□□ 11.7
U2AF2P26368 ABCA11P-203ENST00000507854 1503 ntTSL 1 (best)12.32□□□□□ -0.444e-7■■□□□ 11.7
U2AF2P26368 ABCA11P-201ENST00000451020 1815 ntTSL 2 BASIC10.45□□□□□ -0.744e-7■■□□□ 11.7
U2AF2P26368 ZNF721-206ENST00000515578 1679 ntTSL 1 (best)10.18□□□□□ -0.784e-7■■□□□ 11.7
U2AF2P26368 ZNF721-203ENST00000506646 935 ntTSL 2 BASIC8.64□□□□□ -1.034e-7■■□□□ 11.7
U2AF2P26368 ABCA11P-204ENST00000514396 1423 ntTSL 1 (best)6.91□□□□□ -1.34e-7■■□□□ 11.7
U2AF2P26368 ZNF721-204ENST00000507078 355 ntTSL 52.22□□□□□ -2.054e-7■■□□□ 11.7
U2AF2P26368 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC24.32■■□□□ 1.485e-12■■□□□ 11.7
U2AF2P26368 ECHDC2-202ENST00000371520 1606 ntTSL 1 (best)23■■□□□ 1.275e-12■■□□□ 11.7
U2AF2P26368 ECHDC2-206ENST00000467988 702 ntTSL 522.87■■□□□ 1.255e-12■■□□□ 11.7
U2AF2P26368 ECHDC2-208ENST00000476477 1676 ntTSL 220.7■□□□□ 0.915e-12■■□□□ 11.7
U2AF2P26368 ECHDC2-204ENST00000460612 2645 ntTSL 220.25■□□□□ 0.835e-12■■□□□ 11.7
U2AF2P26368 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.415e-12■■□□□ 11.7
U2AF2P26368 ECHDC2-201ENST00000358358 1126 ntTSL 2 BASIC15.19■□□□□ 0.025e-12■■□□□ 11.7
U2AF2P26368 APOH-204ENST00000585162 407 ntTSL 23.55□□□□□ -1.847e-14■■□□□ 11.7
U2AF2P26368 FUS-207ENST00000487974 643 ntTSL 218.38■□□□□ 0.532e-15■■□□□ 11.7
U2AF2P26368 FAM35A-203ENST00000437629 969 ntTSL 326.74■■□□□ 1.873e-7■■□□□ 11.7
U2AF2P26368 DPM1-204ENST00000413082 672 ntTSL 312.16□□□□□ -0.469e-8■■□□□ 11.7
U2AF2P26368 HERPUD1-205ENST00000562914 570 ntTSL 217.15■□□□□ 0.341e-7■■□□□ 11.7
U2AF2P26368 HERPUD1-215ENST00000568676 571 ntTSL 217.15■□□□□ 0.341e-7■■□□□ 11.7
U2AF2P26368 PAN3-204ENST00000503791 2443 ntTSL 228.27■■■□□ 2.123e-6■■□□□ 11.7
U2AF2P26368 NPEPL1-205ENST00000527081 2061 ntTSL 221.01■□□□□ 0.951e-7■■□□□ 11.7
U2AF2P26368 DAZAP1-209ENST00000590419 508 ntTSL 316.27■□□□□ 0.22e-12■■□□□ 11.7
U2AF2P26368 DDI2-206ENST00000548451 625 ntTSL 53.31□□□□□ -1.883e-7■■□□□ 11.7
U2AF2P26368 BMPR1A-205ENST00000638429 5632 ntTSL 519.55■□□□□ 0.721e-6■■□□□ 11.7
U2AF2P26368 BMPR1A-201ENST00000372037 11255 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.661e-6■■□□□ 11.7
U2AF2P26368 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC4.21□□□□□ -1.744e-10■■□□□ 11.7
U2AF2P26368 UBE2D2-207ENST00000511691 543 ntTSL 22.69□□□□□ -1.984e-10■■□□□ 11.7
U2AF2P26368 ATP11A-213ENST00000489577 383 ntTSL 512.91□□□□□ -0.341e-8■■□□□ 11.7
U2AF2P26368 MAGI1-207ENST00000470990 2138 ntTSL 1 (best)9.35□□□□□ -0.912e-7■■□□□ 11.7
U2AF2P26368 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.527e-7■■□□□ 11.7
U2AF2P26368 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC18.06■□□□□ 0.481e-7■■□□□ 11.7
U2AF2P26368 ACVR2A-201ENST00000241416 5728 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.067e-7■■□□□ 11.7
U2AF2P26368 ACVR2A-202ENST00000404590 2367 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.187e-7■■□□□ 11.7
U2AF2P26368 ACVR2A-207ENST00000535787 5166 ntTSL 2 BASIC10.59□□□□□ -0.717e-7■■□□□ 11.7
U2AF2P26368 SULT1C4-202ENST00000409309 1045 ntTSL 1 (best) BASIC8.55□□□□□ -1.047e-7■■□□□ 11.7
U2AF2P26368 POLR2B-202ENST00000381227 4108 ntAPPRIS P1 TSL 5 BASIC7.51□□□□□ -1.211e-7■■□□□ 11.7
U2AF2P26368 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC6.86□□□□□ -1.311e-7■■□□□ 11.7
U2AF2P26368 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC5.32□□□□□ -1.561e-7■■□□□ 11.7
U2AF2P26368 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.621e-7■■□□□ 11.7
U2AF2P26368 POLR2B-208ENST00000478188 3093 ntTSL 24.79□□□□□ -1.641e-7■■□□□ 11.7
U2AF2P26368 PLCB1-220ENST00000630757 857 ntTSL 34.44□□□□□ -1.72e-7■■□□□ 11.7
U2AF2P26368 PLCB1-229ENST00000637204 100 ntTSL 51.18□□□□□ -2.222e-7■■□□□ 11.7
U2AF2P26368 CCNI-206ENST00000511943 576 ntTSL 32.19□□□□□ -2.064e-8■■□□□ 11.7
U2AF2P26368 BRMS1L-204ENST00000551774 1201 ntTSL 1 (best)4.08□□□□□ -1.764e-7■■□□□ 11.7
U2AF2P26368 NUP58-213ENST00000490231 563 ntTSL 417.23■□□□□ 0.351e-6■■□□□ 11.7
U2AF2P26368 NUP58-214ENST00000495460 947 ntTSL 516.45■□□□□ 0.221e-6■■□□□ 11.7
U2AF2P26368 NUP58-205ENST00000460326 582 ntTSL 215.88■□□□□ 0.131e-6■■□□□ 11.7
U2AF2P26368 NUP58-207ENST00000465068 551 ntTSL 415.55■□□□□ 0.081e-6■■□□□ 11.7
U2AF2P26368 SNHG14-212ENST00000549804 7844 ntTSL 5 BASIC13.15□□□□□ -0.32e-6■■□□□ 11.7
U2AF2P26368 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC5.8□□□□□ -1.485e-9■■□□□ 11.7
U2AF2P26368 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 22e-6■■□□□ 11.7
U2AF2P26368 NSMCE4A-211ENST00000489266 2399 ntTSL 1 (best)26.05■■□□□ 1.762e-6■■□□□ 11.7
U2AF2P26368 FRY-202ENST00000380250 10688 ntTSL 5 BASIC12.15□□□□□ -0.465e-6■■□□□ 11.7
U2AF2P26368 FRY-209ENST00000642040 10697 ntBASIC12.15□□□□□ -0.465e-6■■□□□ 11.7
U2AF2P26368 NSMCE4A-206ENST00000468209 1041 ntTSL 39.76□□□□□ -0.852e-6■■□□□ 11.7
U2AF2P26368 FRY-207ENST00000542859 13200 ntAPPRIS P1 TSL 5 BASIC9.16□□□□□ -0.945e-6■■□□□ 11.7
U2AF2P26368 NSMCE4A-210ENST00000483541 694 ntTSL 32□□□□□ -2.092e-6■■□□□ 11.7
U2AF2P26368 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC24.66■■□□□ 1.544e-10■■□□□ 11.7
U2AF2P26368 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC22.73■■□□□ 1.234e-10■■□□□ 11.7
U2AF2P26368 CDK5RAP1-207ENST00000461710 2650 ntTSL 213.68□□□□□ -0.224e-7■■□□□ 11.7
U2AF2P26368 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC22.05■■□□□ 1.126e-7■■□□□ 11.7
U2AF2P26368 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.416e-7■■□□□ 11.7
U2AF2P26368 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.266e-7■■□□□ 11.7
U2AF2P26368 SNRPN-209ENST00000579070 871 ntTSL 316.48■□□□□ 0.236e-7■■□□□ 11.7
U2AF2P26368 SNRPN-203ENST00000400097 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.26e-7■■□□□ 11.7
U2AF2P26368 SNRPN-210ENST00000584968 908 ntTSL 516.26■□□□□ 0.196e-7■■□□□ 11.7
U2AF2P26368 SNURF-203ENST00000580062 796 ntTSL 316.24■□□□□ 0.196e-7■■□□□ 11.7
U2AF2P26368 SNRPN-205ENST00000400100 1751 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.076e-7■■□□□ 11.7
U2AF2P26368 SNRPN-208ENST00000577565 1298 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.376e-7■■□□□ 11.7
U2AF2P26368 SNRPN-206ENST00000553597 849 ntTSL 39.08□□□□□ -0.966e-7■■□□□ 11.7
U2AF2P26368 GTF2IP20-203ENST00000634905 2966 ntTSL 5 BASIC14.51□□□□□ -0.095e-6■■□□□ 11.7
U2AF2P26368 GTF2IP20-202ENST00000608760 2046 ntBASIC12.73□□□□□ -0.375e-6■■□□□ 11.7
U2AF2P26368 NFAT5-210ENST00000567990 2855 ntTSL 517.59■□□□□ 0.412e-7■■□□□ 11.7
U2AF2P26368 NFAT5-209ENST00000567239 6376 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.192e-7■■□□□ 11.7
U2AF2P26368 NFAT5-208ENST00000566899 4914 ntAPPRIS ALT1 TSL 1 (best) BASIC8.84□□□□□ -0.992e-7■■□□□ 11.7
U2AF2P26368 NFAT5-204ENST00000426654 14219 ntTSL 1 (best)8.47□□□□□ -1.052e-7■■□□□ 11.7
U2AF2P26368 NFAT5-201ENST00000349945 13362 ntAPPRIS ALT1 TSL 1 (best) BASIC8.15□□□□□ -1.112e-7■■□□□ 11.7
U2AF2P26368 NFAT5-202ENST00000354436 13229 ntAPPRIS P4 TSL 1 (best) BASIC7.22□□□□□ -1.252e-7■■□□□ 11.7
U2AF2P26368 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC6.75□□□□□ -1.332e-7■■□□□ 11.7
U2AF2P26368 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.66□□□□□ -1.662e-7■■□□□ 11.7
U2AF2P26368 ABCC6-203ENST00000574094 2260 ntTSL 517.27■□□□□ 0.358e-12■■□□□ 11.7
U2AF2P26368 C1GALT1-205ENST00000436587 6235 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.159e-7■■□□□ 11.7
U2AF2P26368 RCOR3-205ENST00000472734 452 ntTSL 224.4■■□□□ 1.51e-10■■□□□ 11.7
U2AF2P26368 RCOR3-210ENST00000528408 570 ntTSL 218.82■□□□□ 0.61e-10■■□□□ 11.7
U2AF2P26368 RCOR3-216ENST00000534478 564 ntTSL 418.5■□□□□ 0.551e-10■■□□□ 11.7
U2AF2P26368 RCOR3-214ENST00000533469 540 ntTSL 410.63□□□□□ -0.711e-10■■□□□ 11.7
U2AF2P26368 RCOR3-212ENST00000529572 1022 ntTSL 55.4□□□□□ -1.541e-10■■□□□ 11.7
U2AF2P26368 KIZ-201ENST00000419359 517 ntTSL 21.31□□□□□ -2.26e-10■■□□□ 11.7
U2AF2P26368 RAF1-211ENST00000492690 633 ntTSL 34.35□□□□□ -1.711e-9■■□□□ 11.7
U2AF2P26368 LPP-204ENST00000420410 535 ntTSL 321.51■■□□□ 1.034e-7■■□□□ 11.7
U2AF2P26368 LPP-203ENST00000416784 612 ntTSL 310.44□□□□□ -0.744e-7■■□□□ 11.7
U2AF2P26368 LPP-209ENST00000454789 343 ntTSL 59.73□□□□□ -0.854e-7■■□□□ 11.7
U2AF2P26368 LPP-205ENST00000426274 386 ntTSL 58.53□□□□□ -1.044e-7■■□□□ 11.7
U2AF2P26368 LPP-201ENST00000414139 502 ntTSL 47.57□□□□□ -1.24e-7■■□□□ 11.7
U2AF2P26368 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.113e-6■■□□□ 11.7
U2AF2P26368 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC25.04■■□□□ 1.65e-13■■□□□ 11.6
Retrieved 100 of 36,523 protein–RNA pairs in 429 ms