RNA–Protein interactions for RNA: ENST00000528408.5

RCOR3-210, Transcript of REST corepressor 3, humanhuman

TSL 2

Gene RCOR3, Length 570 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCOR3-210ENST00000528408 NISCHQ9Y2I1 1504 aa38.05■■■■□ 3.68
RCOR3-210ENST00000528408 CCDC180Q9P1Z9 1646 aa33.56■■■□□ 2.96
RCOR3-210ENST00000528408 ZCCHC6Q5VYS8 1495 aaKnown RBP31.95■■■□□ 2.7
RCOR3-210ENST00000528408 DCAF1Q9Y4B6 1507 aa31.65■■■□□ 2.66
RCOR3-210ENST00000528408 ABCC9O60706 1549 aa31.64■■■□□ 2.66
RCOR3-210ENST00000528408 MYO15BQ96JP2 1530 aa31.46■■■□□ 2.63
RCOR3-210ENST00000528408 NACADO15069 1562 aa31.24■■■□□ 2.59
RCOR3-210ENST00000528408 DCAF8L2P0C7V8 631 aa31.03■■■□□ 2.56
RCOR3-210ENST00000528408 RB1CC1Q8TDY2 1594 aa31.01■■■□□ 2.56
RCOR3-210ENST00000528408 SCRIBQ14160 1630 aa30.51■■■□□ 2.47
RCOR3-210ENST00000528408 SHROOM4Q9ULL8 1493 aa30.38■■■□□ 2.45
RCOR3-210ENST00000528408 UNC13AQ9UPW8 1703 aa30.35■■■□□ 2.45
RCOR3-210ENST00000528408 BICRAQ9NZM4 1560 aa30.03■■■□□ 2.4
RCOR3-210ENST00000528408 PABPN1Q86U42 306 aaKnown RBP eCLIP29.59■■■□□ 2.33
RCOR3-210ENST00000528408 BAZ1AQ9NRL2 1556 aaPredicted RBP29.47■■■□□ 2.31
RCOR3-210ENST00000528408 CECR2Q9BXF3 1484 aa29.43■■■□□ 2.3
RCOR3-210ENST00000528408 SMARCA4P51532 1647 aa29.35■■■□□ 2.29
RCOR3-210ENST00000528408 RSF1Q96T23 1441 aaPredicted RBP29.29■■■□□ 2.28
RCOR3-210ENST00000528408 MROH2BQ7Z745 1585 aa29.29■■■□□ 2.28
RCOR3-210ENST00000528408 EIF4G1Q04637 1599 aaKnown RBP29.15■■■□□ 2.26
RCOR3-210ENST00000528408 PEG3Q9GZU2 1588 aa29.13■■■□□ 2.25
RCOR3-210ENST00000528408 WIZO95785 1651 aa29.02■■■□□ 2.24
RCOR3-210ENST00000528408 SUPT5HO00267 1087 aaKnown RBP29.02■■■□□ 2.24
RCOR3-210ENST00000528408 SMARCA2P51531 1590 aa28.97■■■□□ 2.23
RCOR3-210ENST00000528408 ATAD2BQ9ULI0 1458 aa28.89■■■□□ 2.22
RCOR3-210ENST00000528408 TOP2AP11388 1531 aaKnown RBP28.85■■■□□ 2.21
RCOR3-210ENST00000528408 HMGXB3Q12766 1538 aa28.79■■■□□ 2.2
RCOR3-210ENST00000528408 NCAPD3P42695 1498 aa28.77■■■□□ 2.2
RCOR3-210ENST00000528408 CC2D2AQ9P2K1 1620 aa28.76■■■□□ 2.2
RCOR3-210ENST00000528408 BAZ1BQ9UIG0 1483 aaKnown RBP28.71■■■□□ 2.19
RCOR3-210ENST00000528408 CCDC88BA6NC98 1476 aa28.4■■■□□ 2.14
RCOR3-210ENST00000528408 DNAJC5BQ9UF47 199 aa28.05■■■□□ 2.08
RCOR3-210ENST00000528408 PRDM2Q13029 1718 aa28.02■■■□□ 2.08
RCOR3-210ENST00000528408 CFTRP13569 1480 aa28.02■■■□□ 2.08
RCOR3-210ENST00000528408 CADPSQ9ULU8 1353 aa27.91■■■□□ 2.06
RCOR3-210ENST00000528408 LAMC3Q9Y6N6 1575 aa27.9■■■□□ 2.06
RCOR3-210ENST00000528408 CHIC1Q5VXU3 224 aa27.75■■■□□ 2.03
RCOR3-210ENST00000528408 NESP48681 1621 aa27.67■■■□□ 2.02
RCOR3-210ENST00000528408 ABCC8Q09428 1581 aa27.65■■■□□ 2.02
RCOR3-210ENST00000528408 FANCD2Q9BXW9 1451 aa27.61■■■□□ 2.01
RCOR3-210ENST00000528408 WRNQ14191 1432 aaPredicted RBP eCLIP27.6■■■□□ 2.01
RCOR3-210ENST00000528408 PDS5BQ9NTI5 1447 aa27.59■■■□□ 2.01
RCOR3-210ENST00000528408 BIVM-ERCC5R4GMW8 1640 aa27.56■■■□□ 2
RCOR3-210ENST00000528408 TOP2BQ02880 1626 aa27.52■■■□□ 2
RCOR3-210ENST00000528408 SYNJ1O43426 1573 aa27.52■■■□□ 2
RCOR3-210ENST00000528408 CEP164Q9UPV0 1460 aa27.51■■■□□ 2
RCOR3-210ENST00000528408 KIF21AQ7Z4S6 1674 aa27.48■■□□□ 1.99
RCOR3-210ENST00000528408 TRIM41Q8WV44 630 aa27.45■■□□□ 1.98
RCOR3-210ENST00000528408 CUX1P39880 1505 aa27.44■■□□□ 1.98
RCOR3-210ENST00000528408 DNMBPQ6XZF7 1577 aa27.4■■□□□ 1.98
RCOR3-210ENST00000528408 TOPBP1Q92547 1522 aa27.3■■□□□ 1.96
RCOR3-210ENST00000528408 URB2Q14146 1524 aaKnown RBP27.28■■□□□ 1.96
RCOR3-210ENST00000528408 MRC2Q9UBG0 1479 aa27.28■■□□□ 1.96
RCOR3-210ENST00000528408 WDR62O43379 1518 aa27.21■■□□□ 1.95
RCOR3-210ENST00000528408 ERCC6Q03468 1493 aa27.21■■□□□ 1.95
RCOR3-210ENST00000528408 THOC2Q8NI27 1593 aaKnown RBP27.21■■□□□ 1.95
RCOR3-210ENST00000528408 FGD5Q6ZNL6 1462 aa27.19■■□□□ 1.94
RCOR3-210ENST00000528408 EEA1Q15075 1411 aa27.16■■□□□ 1.94
RCOR3-210ENST00000528408 POLA1P09884 1462 aaPredicted RBP27.13■■□□□ 1.93
RCOR3-210ENST00000528408 WDR97A6NE52 1622 aa27.06■■□□□ 1.92
RCOR3-210ENST00000528408 ABCA10Q8WWZ4 1543 aa27.02■■□□□ 1.92
RCOR3-210ENST00000528408 SOGA1O94964 1423 aa27.01■■□□□ 1.91
RCOR3-210ENST00000528408 TARBP1Q13395 1621 aaKnown RBP26.98■■□□□ 1.91
RCOR3-210ENST00000528408 KIF27Q86VH2 1401 aa26.95■■□□□ 1.9
RCOR3-210ENST00000528408 CUX2O14529 1486 aa26.93■■□□□ 1.9
RCOR3-210ENST00000528408 IFT140Q96RY7 1462 aa26.91■■□□□ 1.9
RCOR3-210ENST00000528408 RUSC2Q8N2Y8 1516 aa26.9■■□□□ 1.9
RCOR3-210ENST00000528408 RAD54L2Q9Y4B4 1467 aa26.9■■□□□ 1.9
RCOR3-210ENST00000528408 ABCA5Q8WWZ7 1642 aa26.88■■□□□ 1.89
RCOR3-210ENST00000528408 KIF21BO75037 1637 aa26.83■■□□□ 1.88
RCOR3-210ENST00000528408 CSRNP3Q8WYN3 585 aa26.78■■□□□ 1.88
RCOR3-210ENST00000528408 ERICH3Q5RHP9 1530 aa26.75■■□□□ 1.87
RCOR3-210ENST00000528408 FAM9AQ8IZU1 332 aaPredicted RBP26.74■■□□□ 1.87
RCOR3-210ENST00000528408 CUL7Q14999 1698 aa26.73■■□□□ 1.87
RCOR3-210ENST00000528408 PRXQ9BXM0 1461 aa26.72■■□□□ 1.87
RCOR3-210ENST00000528408 GAPVD1Q14C86 1478 aa26.71■■□□□ 1.87
RCOR3-210ENST00000528408 PBRM1Q86U86 1689 aa26.69■■□□□ 1.86
RCOR3-210ENST00000528408 EIF4G3O43432 1585 aaKnown RBP26.67■■□□□ 1.86
RCOR3-210ENST00000528408 IGF1RP08069 1367 aa26.67■■□□□ 1.86
RCOR3-210ENST00000528408 GOLGA3Q08378 1498 aa26.67■■□□□ 1.86
RCOR3-210ENST00000528408 TDRD9Q8NDG6 1382 aaKnown RBP26.63■■□□□ 1.85
RCOR3-210ENST00000528408 ZNF608Q9ULD9 1512 aaPredicted RBP26.62■■□□□ 1.85
RCOR3-210ENST00000528408 GRIN2BQ13224 1484 aa26.61■■□□□ 1.85
RCOR3-210ENST00000528408 AQRO60306 1485 aaKnown RBP eCLIP26.55■■□□□ 1.848e-7■■■□□ 18
RCOR3-210ENST00000528408 RAPGEF2Q9Y4G8 1499 aa26.55■■□□□ 1.84
RCOR3-210ENST00000528408 ADAMTS12P58397 1594 aa26.54■■□□□ 1.84
RCOR3-210ENST00000528408 CARMIL1Q5VZK9 1371 aa26.52■■□□□ 1.84
RCOR3-210ENST00000528408 LOC105371045A0A1W2PR82 267 aa26.49■■□□□ 1.83
RCOR3-210ENST00000528408 MAGI1Q96QZ7 1491 aaPredicted RBP26.49■■□□□ 1.83
RCOR3-210ENST00000528408 TNIKQ9UKE5 1360 aa26.48■■□□□ 1.83
RCOR3-210ENST00000528408 FHAD1B1AJZ9 1412 aa26.46■■□□□ 1.83
RCOR3-210ENST00000528408 SNAPC4Q5SXM2 1469 aa26.41■■□□□ 1.82
RCOR3-210ENST00000528408 CTTNBP2Q8WZ74 1663 aa26.34■■□□□ 1.81
RCOR3-210ENST00000528408 SYNJ2O15056 1496 aa26.34■■□□□ 1.81
RCOR3-210ENST00000528408 UBTFP17480 764 aaKnown RBP26.29■■□□□ 1.8
RCOR3-210ENST00000528408 GRIN2AQ12879 1464 aa26.28■■□□□ 1.8
RCOR3-210ENST00000528408 CEP162Q5TB80 1403 aa26.27■■□□□ 1.8
RCOR3-210ENST00000528408 EHMT2Q96KQ7 1210 aa26.21■■□□□ 1.79
RCOR3-210ENST00000528408 CLIP1P30622 1438 aa26.14■■□□□ 1.78
RCOR3-210ENST00000528408 NUP160Q12769 1436 aa26.14■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms