RNA–Protein interactions for RNA: ENST00000536120.5

ECHDC2-221, Transcript of enoyl-CoA hydratase domain containing 2, humanhuman

TSL 3 BASIC

Gene ECHDC2, Length 1,446 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC2-221ENST00000536120 NISCHQ9Y2I1 1504 aa50.66■■■■■ 5.7
ECHDC2-221ENST00000536120 CCDC180Q9P1Z9 1646 aa44.65■■■■■ 4.74
ECHDC2-221ENST00000536120 ABCC9O60706 1549 aa43.2■■■■■ 4.51
ECHDC2-221ENST00000536120 ZCCHC6Q5VYS8 1495 aaKnown RBP42.33■■■■■ 4.37
ECHDC2-221ENST00000536120 DCAF8L2P0C7V8 631 aa42.07■■■■■ 4.33
ECHDC2-221ENST00000536120 DCAF1Q9Y4B6 1507 aa41.91■■■■■ 4.3
ECHDC2-221ENST00000536120 NACADO15069 1562 aa41.88■■■■■ 4.29
ECHDC2-221ENST00000536120 MYO15BQ96JP2 1530 aa41.85■■■■■ 4.29
ECHDC2-221ENST00000536120 RB1CC1Q8TDY2 1594 aa41.75■■■■■ 4.27
ECHDC2-221ENST00000536120 SCRIBQ14160 1630 aa40.84■■■■■ 4.13
ECHDC2-221ENST00000536120 UNC13AQ9UPW8 1703 aa40.81■■■■■ 4.12
ECHDC2-221ENST00000536120 BICRAQ9NZM4 1560 aa40.56■■■■■ 4.08
ECHDC2-221ENST00000536120 PABPN1Q86U42 306 aaKnown RBP eCLIP40.53■■■■■ 4.087e-7■□□□□ 10.8
ECHDC2-221ENST00000536120 SHROOM4Q9ULL8 1493 aa40.42■■■■■ 4.06
ECHDC2-221ENST00000536120 CECR2Q9BXF3 1484 aa39.45■■■■□ 3.91
ECHDC2-221ENST00000536120 EIF4G1Q04637 1599 aaKnown RBP39.4■■■■□ 3.9
ECHDC2-221ENST00000536120 DNAJC5BQ9UF47 199 aa39.22■■■■□ 3.87
ECHDC2-221ENST00000536120 BAZ1AQ9NRL2 1556 aaPredicted RBP39.16■■■■□ 3.86
ECHDC2-221ENST00000536120 SMARCA4P51532 1647 aa39.13■■■■□ 3.85
ECHDC2-221ENST00000536120 MROH2BQ7Z745 1585 aa39.08■■■■□ 3.85
ECHDC2-221ENST00000536120 CC2D2AQ9P2K1 1620 aa39.07■■■■□ 3.85
ECHDC2-221ENST00000536120 RSF1Q96T23 1441 aaPredicted RBP38.87■■■■□ 3.81
ECHDC2-221ENST00000536120 ATAD2BQ9ULI0 1458 aa38.82■■■■□ 3.8
ECHDC2-221ENST00000536120 PEG3Q9GZU2 1588 aa38.76■■■■□ 3.8
ECHDC2-221ENST00000536120 SMARCA2P51531 1590 aa38.72■■■■□ 3.79
ECHDC2-221ENST00000536120 NCAPD3P42695 1498 aa38.7■■■■□ 3.79
ECHDC2-221ENST00000536120 WIZO95785 1651 aa38.64■■■■□ 3.78
ECHDC2-221ENST00000536120 HMGXB3Q12766 1538 aa38.5■■■■□ 3.75
ECHDC2-221ENST00000536120 BAZ1BQ9UIG0 1483 aaKnown RBP38.48■■■■□ 3.75
ECHDC2-221ENST00000536120 SUPT5HO00267 1087 aaKnown RBP38.34■■■■□ 3.73
ECHDC2-221ENST00000536120 TOP2AP11388 1531 aaKnown RBP38.26■■■■□ 3.71
ECHDC2-221ENST00000536120 CCDC88BA6NC98 1476 aa37.86■■■■□ 3.65
ECHDC2-221ENST00000536120 CADPSQ9ULU8 1353 aa37.61■■■■□ 3.61
ECHDC2-221ENST00000536120 NESP48681 1621 aa37.6■■■■□ 3.61
ECHDC2-221ENST00000536120 CFTRP13569 1480 aa37.51■■■■□ 3.6
ECHDC2-221ENST00000536120 LAMC3Q9Y6N6 1575 aa37.5■■■■□ 3.59
ECHDC2-221ENST00000536120 PDS5BQ9NTI5 1447 aa37.26■■■■□ 3.55
ECHDC2-221ENST00000536120 FANCD2Q9BXW9 1451 aa37.15■■■■□ 3.54
ECHDC2-221ENST00000536120 PRDM2Q13029 1718 aa37.13■■■■□ 3.53
ECHDC2-221ENST00000536120 ERCC6Q03468 1493 aa37.12■■■■□ 3.53
ECHDC2-221ENST00000536120 KIF21AQ7Z4S6 1674 aa37.08■■■■□ 3.53
ECHDC2-221ENST00000536120 CEP164Q9UPV0 1460 aa37.01■■■■□ 3.51
ECHDC2-221ENST00000536120 MRC2Q9UBG0 1479 aa36.85■■■■□ 3.49
ECHDC2-221ENST00000536120 THOC2Q8NI27 1593 aaKnown RBP36.83■■■■□ 3.49
ECHDC2-221ENST00000536120 URB2Q14146 1524 aaKnown RBP36.77■■■■□ 3.48
ECHDC2-221ENST00000536120 WDR62O43379 1518 aa36.7■■■■□ 3.47
ECHDC2-221ENST00000536120 ABCC8Q09428 1581 aa36.64■■■■□ 3.46
ECHDC2-221ENST00000536120 TOPBP1Q92547 1522 aa36.63■■■■□ 3.45
ECHDC2-221ENST00000536120 CUX1P39880 1505 aa36.61■■■■□ 3.45
ECHDC2-221ENST00000536120 DNMBPQ6XZF7 1577 aa36.6■■■■□ 3.45
ECHDC2-221ENST00000536120 WRNQ14191 1432 aaPredicted RBP eCLIP36.59■■■■□ 3.45
ECHDC2-221ENST00000536120 CUX2O14529 1486 aa36.52■■■■□ 3.44
ECHDC2-221ENST00000536120 SYNJ1O43426 1573 aa36.46■■■■□ 3.43
ECHDC2-221ENST00000536120 TOP2BQ02880 1626 aa36.41■■■■□ 3.42
ECHDC2-221ENST00000536120 BIVM-ERCC5R4GMW8 1640 aa36.38■■■■□ 3.41
ECHDC2-221ENST00000536120 POLA1P09884 1462 aaPredicted RBP36.37■■■■□ 3.41
ECHDC2-221ENST00000536120 FGD5Q6ZNL6 1462 aa36.37■■■■□ 3.41
ECHDC2-221ENST00000536120 RAD54L2Q9Y4B4 1467 aa36.23■■■■□ 3.39
ECHDC2-221ENST00000536120 SOGA1O94964 1423 aa36.23■■■■□ 3.39
ECHDC2-221ENST00000536120 IFT140Q96RY7 1462 aa36.23■■■■□ 3.39
ECHDC2-221ENST00000536120 CHIC1Q5VXU3 224 aa36.2■■■■□ 3.39
ECHDC2-221ENST00000536120 TARBP1Q13395 1621 aaKnown RBP36.18■■■■□ 3.38
ECHDC2-221ENST00000536120 TRIM41Q8WV44 630 aa36.16■■■■□ 3.38
ECHDC2-221ENST00000536120 ZNF608Q9ULD9 1512 aaPredicted RBP36.06■■■■□ 3.36
ECHDC2-221ENST00000536120 ABCA10Q8WWZ4 1543 aa36.04■■■■□ 3.36
ECHDC2-221ENST00000536120 WDR97A6NE52 1622 aa35.99■■■■□ 3.35
ECHDC2-221ENST00000536120 TDRD9Q8NDG6 1382 aaKnown RBP35.98■■■■□ 3.35
ECHDC2-221ENST00000536120 AQRO60306 1485 aaKnown RBP eCLIP35.95■■■■□ 3.353e-6■■■□□ 18.1
ECHDC2-221ENST00000536120 EIF4G3O43432 1585 aaKnown RBP35.87■■■■□ 3.33
ECHDC2-221ENST00000536120 ABCA5Q8WWZ7 1642 aa35.82■■■■□ 3.32
ECHDC2-221ENST00000536120 GAPVD1Q14C86 1478 aa35.81■■■■□ 3.32
ECHDC2-221ENST00000536120 KIF27Q86VH2 1401 aa35.75■■■■□ 3.31
ECHDC2-221ENST00000536120 RUSC2Q8N2Y8 1516 aa35.72■■■■□ 3.31
ECHDC2-221ENST00000536120 GRIN2BQ13224 1484 aa35.71■■■■□ 3.31
ECHDC2-221ENST00000536120 IGF1RP08069 1367 aa35.62■■■■□ 3.29
ECHDC2-221ENST00000536120 PBRM1Q86U86 1689 aa35.61■■■■□ 3.29
ECHDC2-221ENST00000536120 ERICH3Q5RHP9 1530 aa35.59■■■■□ 3.29
ECHDC2-221ENST00000536120 SNAPC4Q5SXM2 1469 aa35.58■■■■□ 3.29
ECHDC2-221ENST00000536120 MAGI1Q96QZ7 1491 aaPredicted RBP35.53■■■■□ 3.28
ECHDC2-221ENST00000536120 EEA1Q15075 1411 aa35.46■■■■□ 3.27
ECHDC2-221ENST00000536120 ADAMTS12P58397 1594 aa35.43■■■■□ 3.26
ECHDC2-221ENST00000536120 FHAD1B1AJZ9 1412 aa35.42■■■■□ 3.26
ECHDC2-221ENST00000536120 FAM9AQ8IZU1 332 aaPredicted RBP35.42■■■■□ 3.26
ECHDC2-221ENST00000536120 CSRNP3Q8WYN3 585 aa35.4■■■■□ 3.26
ECHDC2-221ENST00000536120 SYNJ2O15056 1496 aa35.4■■■■□ 3.26
ECHDC2-221ENST00000536120 CARMIL1Q5VZK9 1371 aa35.38■■■■□ 3.25
ECHDC2-221ENST00000536120 FBLN2P98095 1184 aa35.35■■■■□ 3.25
ECHDC2-221ENST00000536120 CHMP7Q8WUX9 453 aaPredicted RBP35.35■■■■□ 3.25
ECHDC2-221ENST00000536120 CUL7Q14999 1698 aa35.34■■■■□ 3.25
ECHDC2-221ENST00000536120 PRXQ9BXM0 1461 aa35.28■■■■□ 3.24
ECHDC2-221ENST00000536120 CHD1O14646 1710 aa35.28■■■■□ 3.24
ECHDC2-221ENST00000536120 GRIN2AQ12879 1464 aa35.26■■■■□ 3.24
ECHDC2-221ENST00000536120 RAPGEF2Q9Y4G8 1499 aa35.21■■■■□ 3.23
ECHDC2-221ENST00000536120 OSCARQ8IYS5 282 aa35.17■■■■□ 3.22
ECHDC2-221ENST00000536120 NUP160Q12769 1436 aa35.1■■■■□ 3.21
ECHDC2-221ENST00000536120 CEP170Q5SW79 1584 aa35.07■■■■□ 3.2
ECHDC2-221ENST00000536120 KIF21BO75037 1637 aa35.05■■■■□ 3.2
ECHDC2-221ENST00000536120 CLASP1Q7Z460 1538 aa34.97■■■■□ 3.19
ECHDC2-221ENST00000536120 EHMT2Q96KQ7 1210 aa34.91■■■■□ 3.18
ECHDC2-221ENST00000536120 KIAA0586Q9BVV6 1533 aa34.9■■■■□ 3.18
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms