RNA–Protein interactions for RNA: ENST00000400097.5

SNRPN-203, Transcript of small nuclear ribonucleoprotein polypeptide N, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPN, Length 1,605 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPN-203ENST00000400097 NISCHQ9Y2I1 1504 aa34.57■■■■□ 3.12
SNRPN-203ENST00000400097 CCDC180Q9P1Z9 1646 aa30.73■■■□□ 2.51
SNRPN-203ENST00000400097 ABCC9O60706 1549 aa29.89■■■□□ 2.38
SNRPN-203ENST00000400097 DCAF8L2P0C7V8 631 aa28.94■■■□□ 2.22
SNRPN-203ENST00000400097 RB1CC1Q8TDY2 1594 aa28.85■■■□□ 2.21
SNRPN-203ENST00000400097 NACADO15069 1562 aa28.82■■■□□ 2.2
SNRPN-203ENST00000400097 ZCCHC6Q5VYS8 1495 aaKnown RBP28.81■■■□□ 2.2
SNRPN-203ENST00000400097 MYO15BQ96JP2 1530 aa28.64■■■□□ 2.18
SNRPN-203ENST00000400097 DCAF1Q9Y4B6 1507 aa28.59■■■□□ 2.17
SNRPN-203ENST00000400097 UNC13AQ9UPW8 1703 aa28.26■■■□□ 2.11
SNRPN-203ENST00000400097 SCRIBQ14160 1630 aa28.06■■■□□ 2.08
SNRPN-203ENST00000400097 PABPN1Q86U42 306 aaKnown RBP eCLIP27.95■■■□□ 2.06
SNRPN-203ENST00000400097 BICRAQ9NZM4 1560 aa27.9■■■□□ 2.06
SNRPN-203ENST00000400097 SHROOM4Q9ULL8 1493 aa27.62■■■□□ 2.01
SNRPN-203ENST00000400097 DNAJC5BQ9UF47 199 aa27.19■■□□□ 1.94
SNRPN-203ENST00000400097 EIF4G1Q04637 1599 aaKnown RBP27.19■■□□□ 1.94
SNRPN-203ENST00000400097 CC2D2AQ9P2K1 1620 aa27.06■■□□□ 1.92
SNRPN-203ENST00000400097 CECR2Q9BXF3 1484 aa26.9■■□□□ 1.9
SNRPN-203ENST00000400097 SMARCA4P51532 1647 aa26.83■■□□□ 1.89
SNRPN-203ENST00000400097 BAZ1AQ9NRL2 1556 aaPredicted RBP26.82■■□□□ 1.88
SNRPN-203ENST00000400097 MROH2BQ7Z745 1585 aa26.65■■□□□ 1.86
SNRPN-203ENST00000400097 SMARCA2P51531 1590 aa26.62■■□□□ 1.85
SNRPN-203ENST00000400097 ATAD2BQ9ULI0 1458 aa26.59■■□□□ 1.85
SNRPN-203ENST00000400097 NCAPD3P42695 1498 aa26.54■■□□□ 1.84
SNRPN-203ENST00000400097 PEG3Q9GZU2 1588 aa26.51■■□□□ 1.83
SNRPN-203ENST00000400097 HMGXB3Q12766 1538 aa26.46■■□□□ 1.83
SNRPN-203ENST00000400097 BAZ1BQ9UIG0 1483 aaKnown RBP26.44■■□□□ 1.82
SNRPN-203ENST00000400097 WIZO95785 1651 aa26.43■■□□□ 1.82
SNRPN-203ENST00000400097 RSF1Q96T23 1441 aaPredicted RBP26.38■■□□□ 1.81
SNRPN-203ENST00000400097 TOP2AP11388 1531 aaKnown RBP26.12■■□□□ 1.77
SNRPN-203ENST00000400097 SUPT5HO00267 1087 aaKnown RBP25.94■■□□□ 1.74
SNRPN-203ENST00000400097 NESP48681 1621 aa25.89■■□□□ 1.73
SNRPN-203ENST00000400097 LAMC3Q9Y6N6 1575 aa25.88■■□□□ 1.73
SNRPN-203ENST00000400097 ERCC6Q03468 1493 aa25.8■■□□□ 1.72
SNRPN-203ENST00000400097 CCDC88BA6NC98 1476 aa25.79■■□□□ 1.72
SNRPN-203ENST00000400097 CADPSQ9ULU8 1353 aa25.79■■□□□ 1.72
SNRPN-203ENST00000400097 PDS5BQ9NTI5 1447 aa25.69■■□□□ 1.7
SNRPN-203ENST00000400097 KIF21AQ7Z4S6 1674 aa25.68■■□□□ 1.7
SNRPN-203ENST00000400097 CFTRP13569 1480 aa25.66■■□□□ 1.7
SNRPN-203ENST00000400097 PRDM2Q13029 1718 aa25.65■■□□□ 1.7
SNRPN-203ENST00000400097 FANCD2Q9BXW9 1451 aa25.53■■□□□ 1.68
SNRPN-203ENST00000400097 CEP164Q9UPV0 1460 aa25.51■■□□□ 1.67
SNRPN-203ENST00000400097 THOC2Q8NI27 1593 aaKnown RBP25.48■■□□□ 1.67
SNRPN-203ENST00000400097 MRC2Q9UBG0 1479 aa25.41■■□□□ 1.66
SNRPN-203ENST00000400097 CUX2O14529 1486 aa25.4■■□□□ 1.66
SNRPN-203ENST00000400097 WDR62O43379 1518 aa25.3■■□□□ 1.64
SNRPN-203ENST00000400097 URB2Q14146 1524 aaKnown RBP25.23■■□□□ 1.63
SNRPN-203ENST00000400097 ABCC8Q09428 1581 aa25.18■■□□□ 1.62
SNRPN-203ENST00000400097 DNMBPQ6XZF7 1577 aa25.14■■□□□ 1.62
SNRPN-203ENST00000400097 TOPBP1Q92547 1522 aa25.13■■□□□ 1.61
SNRPN-203ENST00000400097 CUX1P39880 1505 aa24.99■■□□□ 1.59
SNRPN-203ENST00000400097 IFT140Q96RY7 1462 aa24.94■■□□□ 1.58
SNRPN-203ENST00000400097 POLA1P09884 1462 aaPredicted RBP24.92■■□□□ 1.58
SNRPN-203ENST00000400097 WRNQ14191 1432 aaPredicted RBP eCLIP24.91■■□□□ 1.58
SNRPN-203ENST00000400097 FGD5Q6ZNL6 1462 aa24.9■■□□□ 1.58
SNRPN-203ENST00000400097 BIVM-ERCC5R4GMW8 1640 aa24.86■■□□□ 1.57
SNRPN-203ENST00000400097 TOP2BQ02880 1626 aa24.85■■□□□ 1.57
SNRPN-203ENST00000400097 TARBP1Q13395 1621 aaKnown RBP24.85■■□□□ 1.57
SNRPN-203ENST00000400097 SOGA1O94964 1423 aa24.84■■□□□ 1.57
SNRPN-203ENST00000400097 SYNJ1O43426 1573 aa24.84■■□□□ 1.57
SNRPN-203ENST00000400097 RAD54L2Q9Y4B4 1467 aa24.82■■□□□ 1.56
SNRPN-203ENST00000400097 ZNF608Q9ULD9 1512 aaPredicted RBP24.79■■□□□ 1.56
SNRPN-203ENST00000400097 EIF4G3O43432 1585 aaKnown RBP24.75■■□□□ 1.55
SNRPN-203ENST00000400097 WDR97A6NE52 1622 aa24.71■■□□□ 1.55
SNRPN-203ENST00000400097 AQRO60306 1485 aaKnown RBP eCLIP24.69■■□□□ 1.541e-6■□□□□ 10.6
SNRPN-203ENST00000400097 TDRD9Q8NDG6 1382 aaKnown RBP24.67■■□□□ 1.54
SNRPN-203ENST00000400097 ABCA10Q8WWZ4 1543 aa24.65■■□□□ 1.54
SNRPN-203ENST00000400097 PBRM1Q86U86 1689 aa24.58■■□□□ 1.53
SNRPN-203ENST00000400097 GAPVD1Q14C86 1478 aa24.57■■□□□ 1.52
SNRPN-203ENST00000400097 ABCA5Q8WWZ7 1642 aa24.56■■□□□ 1.52
SNRPN-203ENST00000400097 GRIN2BQ13224 1484 aa24.53■■□□□ 1.52
SNRPN-203ENST00000400097 TRIM41Q8WV44 630 aa24.5■■□□□ 1.51
SNRPN-203ENST00000400097 SNAPC4Q5SXM2 1469 aa24.48■■□□□ 1.51
SNRPN-203ENST00000400097 CHD1O14646 1710 aa24.47■■□□□ 1.51
SNRPN-203ENST00000400097 MAGI1Q96QZ7 1491 aaPredicted RBP24.45■■□□□ 1.5
SNRPN-203ENST00000400097 FBLN2P98095 1184 aa24.45■■□□□ 1.5
SNRPN-203ENST00000400097 DNAJC5Q9H3Z4 198 aa24.42■■□□□ 1.5
SNRPN-203ENST00000400097 OSCARQ8IYS5 282 aa24.41■■□□□ 1.5
SNRPN-203ENST00000400097 KIF27Q86VH2 1401 aa24.4■■□□□ 1.5
SNRPN-203ENST00000400097 ERICH3Q5RHP9 1530 aa24.38■■□□□ 1.49
SNRPN-203ENST00000400097 CHMP7Q8WUX9 453 aaPredicted RBP24.37■■□□□ 1.49
SNRPN-203ENST00000400097 SYNJ2O15056 1496 aa24.35■■□□□ 1.49
SNRPN-203ENST00000400097 ADAMTS12P58397 1594 aa24.32■■□□□ 1.48
SNRPN-203ENST00000400097 FHAD1B1AJZ9 1412 aa24.27■■□□□ 1.48
SNRPN-203ENST00000400097 CUL7Q14999 1698 aa24.25■■□□□ 1.47
SNRPN-203ENST00000400097 CHIC1Q5VXU3 224 aa24.23■■□□□ 1.47
SNRPN-203ENST00000400097 IGF1RP08069 1367 aa24.21■■□□□ 1.47
SNRPN-203ENST00000400097 GRIN2AQ12879 1464 aa24.21■■□□□ 1.47
SNRPN-203ENST00000400097 RUSC2Q8N2Y8 1516 aa24.19■■□□□ 1.46
SNRPN-203ENST00000400097 CARMIL1Q5VZK9 1371 aa24.12■■□□□ 1.45
SNRPN-203ENST00000400097 CLASP1Q7Z460 1538 aa24.1■■□□□ 1.45
SNRPN-203ENST00000400097 CEP170Q5SW79 1584 aa24.09■■□□□ 1.45
SNRPN-203ENST00000400097 NUP160Q12769 1436 aa24.06■■□□□ 1.44
SNRPN-203ENST00000400097 EEA1Q15075 1411 aa24.03■■□□□ 1.44
SNRPN-203ENST00000400097 RIMBP3CA6NJZ7 1639 aa24.02■■□□□ 1.44
SNRPN-203ENST00000400097 RIMBP3BA6NNM3 1639 aa24.02■■□□□ 1.44
SNRPN-203ENST00000400097 RIMBP3Q9UFD9 1639 aa24.02■■□□□ 1.44
SNRPN-203ENST00000400097 RAPGEF2Q9Y4G8 1499 aa24■■□□□ 1.43
SNRPN-203ENST00000400097 FAM9AQ8IZU1 332 aaPredicted RBP23.99■■□□□ 1.43
SNRPN-203ENST00000400097 ARHGEF11O15085 1522 aa23.99■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms