RNA–Protein interactions for RNA: ENST00000441246.6

POLR2B-205, Transcript of RNA polymerase II subunit B, humanhuman

TSL 2 BASIC

Gene POLR2B, Length 3,839 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2B-205ENST00000441246 NISCHQ9Y2I1 1504 aa29.32■■■□□ 2.28
POLR2B-205ENST00000441246 SHROOM4Q9ULL8 1493 aa25.81■■□□□ 1.72
POLR2B-205ENST00000441246 SUPT5HO00267 1087 aaKnown RBP25.54■■□□□ 1.68
POLR2B-205ENST00000441246 HRCP23327 699 aa25.35■■□□□ 1.65
POLR2B-205ENST00000441246 MYO15BQ96JP2 1530 aa25.3■■□□□ 1.64
POLR2B-205ENST00000441246 CHIC1Q5VXU3 224 aa25.04■■□□□ 1.6
POLR2B-205ENST00000441246 PCGF6Q9BYE7 350 aa25.02■■□□□ 1.6
POLR2B-205ENST00000441246 PPARGC1BQ86YN6 1023 aaKnown RBP25.01■■□□□ 1.59
POLR2B-205ENST00000441246 ZCCHC6Q5VYS8 1495 aaKnown RBP24.92■■□□□ 1.58
POLR2B-205ENST00000441246 LOC105371045A0A1W2PR82 267 aa24.51■■□□□ 1.51
POLR2B-205ENST00000441246 DCAF1Q9Y4B6 1507 aa24.48■■□□□ 1.51
POLR2B-205ENST00000441246 CCDC180Q9P1Z9 1646 aa24.45■■□□□ 1.51
POLR2B-205ENST00000441246 DCAF8L2P0C7V8 631 aa24.38■■□□□ 1.49
POLR2B-205ENST00000441246 TRIM26Q12899 539 aaPredicted RBP24.19■■□□□ 1.46
POLR2B-205ENST00000441246 SCAF1Q9H7N4 1312 aaKnown RBP23.92■■□□□ 1.42
POLR2B-205ENST00000441246 PELP1Q8IZL8 1130 aaKnown RBP23.76■■□□□ 1.39
POLR2B-205ENST00000441246 ZEB1P37275 1124 aaPredicted RBP23.76■■□□□ 1.39
POLR2B-205ENST00000441246 ABCC9O60706 1549 aa23.66■■□□□ 1.38
POLR2B-205ENST00000441246 FAM9AQ8IZU1 332 aaPredicted RBP23.63■■□□□ 1.37
POLR2B-205ENST00000441246 EHMT2Q96KQ7 1210 aa23.58■■□□□ 1.37
POLR2B-205ENST00000441246 TRIM41Q8WV44 630 aa23.57■■□□□ 1.36
POLR2B-205ENST00000441246 RSF1Q96T23 1441 aaPredicted RBP23.53■■□□□ 1.36
POLR2B-205ENST00000441246 RB1CC1Q8TDY2 1594 aa23.48■■□□□ 1.35
POLR2B-205ENST00000441246 NEUROD1Q13562 356 aa23.35■■□□□ 1.33
POLR2B-205ENST00000441246 SCRIBQ14160 1630 aa23.34■■□□□ 1.33
POLR2B-205ENST00000441246 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.31■■□□□ 1.32
POLR2B-205ENST00000441246 ACIN1Q9UKV3 1341 aaKnown RBP23.31■■□□□ 1.32
POLR2B-205ENST00000441246 CCER1Q8TC90 406 aaPredicted RBP23.14■■□□□ 1.3
POLR2B-205ENST00000441246 GTF3C3Q9Y5Q9 886 aa23.14■■□□□ 1.29
POLR2B-205ENST00000441246 DIEXFQ68CQ4 756 aaKnown RBP23.07■■□□□ 1.28
POLR2B-205ENST00000441246 CECR2Q9BXF3 1484 aa23.02■■□□□ 1.28
POLR2B-205ENST00000441246 MROH2BQ7Z745 1585 aa22.96■■□□□ 1.27
POLR2B-205ENST00000441246 TTBK1Q5TCY1 1321 aaPredicted RBP22.96■■□□□ 1.27
POLR2B-205ENST00000441246 WIZO95785 1651 aa22.91■■□□□ 1.26
POLR2B-205ENST00000441246 CENPBP07199 599 aaPredicted RBP22.9■■□□□ 1.26
POLR2B-205ENST00000441246 EIF4G1Q04637 1599 aaKnown RBP22.8■■□□□ 1.24
POLR2B-205ENST00000441246 YTHDC1Q96MU7 727 aaKnown RBP22.71■■□□□ 1.23
POLR2B-205ENST00000441246 WRNQ14191 1432 aaPredicted RBP eCLIP22.7■■□□□ 1.22
POLR2B-205ENST00000441246 ABCC8Q09428 1581 aa22.68■■□□□ 1.22
POLR2B-205ENST00000441246 CEP162Q5TB80 1403 aa22.67■■□□□ 1.22
POLR2B-205ENST00000441246 CCDC88BA6NC98 1476 aa22.67■■□□□ 1.22
POLR2B-205ENST00000441246 ZNF316A6NFI3 1004 aaPredicted RBP22.66■■□□□ 1.22
POLR2B-205ENST00000441246 BAZ1AQ9NRL2 1556 aaPredicted RBP22.65■■□□□ 1.22
POLR2B-205ENST00000441246 MYT1Q01538 1121 aa22.64■■□□□ 1.21
POLR2B-205ENST00000441246 MIER1Q8N108 512 aa22.58■■□□□ 1.2
POLR2B-205ENST00000441246 SOGA1O94964 1423 aa22.57■■□□□ 1.2
POLR2B-205ENST00000441246 NACADO15069 1562 aa22.5■■□□□ 1.19
POLR2B-205ENST00000441246 RUSC2Q8N2Y8 1516 aa22.5■■□□□ 1.19
POLR2B-205ENST00000441246 TNIKQ9UKE5 1360 aa22.48■■□□□ 1.19
POLR2B-205ENST00000441246 UBTFP17480 764 aaKnown RBP22.38■■□□□ 1.17
POLR2B-205ENST00000441246 HNRNPUL2Q1KMD3 747 aaKnown RBP22.38■■□□□ 1.17
POLR2B-205ENST00000441246 TOP2AP11388 1531 aaKnown RBP22.36■■□□□ 1.17
POLR2B-205ENST00000441246 SMARCA2P51531 1590 aa22.35■■□□□ 1.17
POLR2B-205ENST00000441246 CSRNP3Q8WYN3 585 aa22.34■■□□□ 1.17
POLR2B-205ENST00000441246 GOLGA3Q08378 1498 aa22.23■■□□□ 1.15
POLR2B-205ENST00000441246 SMARCA4P51532 1647 aa22.21■■□□□ 1.15
POLR2B-205ENST00000441246 EEA1Q15075 1411 aa22.2■■□□□ 1.14
POLR2B-205ENST00000441246 SUPT16HQ9Y5B9 1047 aaKnown RBP22.1■■□□□ 1.13
POLR2B-205ENST00000441246 CLIP1P30622 1438 aa22.08■■□□□ 1.12
POLR2B-205ENST00000441246 VPS8Q8N3P4 1428 aa22.03■■□□□ 1.12
POLR2B-205ENST00000441246 CEP164Q9UPV0 1460 aa22.01■■□□□ 1.11
POLR2B-205ENST00000441246 SYNJ1O43426 1573 aa22.01■■□□□ 1.11
POLR2B-205ENST00000441246 RANGAP1P46060 587 aaPredicted RBP22.01■■□□□ 1.11
POLR2B-205ENST00000441246 KIF21BO75037 1637 aa22.01■■□□□ 1.11
POLR2B-205ENST00000441246 UNC13AQ9UPW8 1703 aa21.96■■□□□ 1.11
POLR2B-205ENST00000441246 DHX57Q6P158 1386 aaKnown RBP21.95■■□□□ 1.1
POLR2B-205ENST00000441246 RAPGEF2Q9Y4G8 1499 aa21.95■■□□□ 1.1
POLR2B-205ENST00000441246 TSHZ2Q9NRE2 1034 aa21.94■■□□□ 1.1
POLR2B-205ENST00000441246 APLP2Q06481 763 aa21.87■■□□□ 1.09
POLR2B-205ENST00000441246 KCNH8Q96L42 1107 aa21.86■■□□□ 1.09
POLR2B-205ENST00000441246 CLSPNQ9HAW4 1339 aa21.82■■□□□ 1.08
POLR2B-205ENST00000441246 BAZ1BQ9UIG0 1483 aaKnown RBP21.82■■□□□ 1.08
POLR2B-205ENST00000441246 KANK4Q5T7N3 995 aaPredicted RBP21.79■■□□□ 1.08
POLR2B-205ENST00000441246 ANP32EQ9BTT0 268 aa21.76■■□□□ 1.07
POLR2B-205ENST00000441246 ARAP1Q96P48 1450 aa21.7■■□□□ 1.06
POLR2B-205ENST00000441246 BCANQ96GW7 911 aa21.69■■□□□ 1.06
POLR2B-205ENST00000441246 PABPN1Q86U42 306 aaKnown RBP eCLIP21.69■■□□□ 1.06
POLR2B-205ENST00000441246 PEG3Q9GZU2 1588 aa21.64■■□□□ 1.06
POLR2B-205ENST00000441246 RRBP1Q9P2E9 1410 aaKnown RBP21.61■■□□□ 1.05
POLR2B-205ENST00000441246 BICRAQ9NZM4 1560 aa21.59■■□□□ 1.05
POLR2B-205ENST00000441246 ITGAEP38570 1179 aa21.57■■□□□ 1.04
POLR2B-205ENST00000441246 CUX2O14529 1486 aa21.57■■□□□ 1.04
POLR2B-205ENST00000441246 BCL11AQ9H165 835 aa21.56■■□□□ 1.04
POLR2B-205ENST00000441246 TOP2BQ02880 1626 aa21.55■■□□□ 1.04
POLR2B-205ENST00000441246 FKBP8Q14318 412 aa21.55■■□□□ 1.04
POLR2B-205ENST00000441246 MAPKBP1O60336 1514 aa21.54■■□□□ 1.04
POLR2B-205ENST00000441246 PRXQ9BXM0 1461 aa21.54■■□□□ 1.04
POLR2B-205ENST00000441246 CCNB3Q8WWL7 1395 aa21.5■■□□□ 1.03
POLR2B-205ENST00000441246 ERICH3Q5RHP9 1530 aa21.5■■□□□ 1.03
POLR2B-205ENST00000441246 ATAD2BQ9ULI0 1458 aa21.49■■□□□ 1.03
POLR2B-205ENST00000441246 DDX10Q13206 875 aaKnown RBP21.47■■□□□ 1.03
POLR2B-205ENST00000441246 RAB3GAP2Q9H2M9 1393 aa21.47■■□□□ 1.03
POLR2B-205ENST00000441246 WDR97A6NE52 1622 aa21.45■■□□□ 1.02
POLR2B-205ENST00000441246 BIVM-ERCC5R4GMW8 1640 aa21.44■■□□□ 1.02
POLR2B-205ENST00000441246 RBM19Q9Y4C8 960 aaKnown RBP21.42■■□□□ 1.02
POLR2B-205ENST00000441246 SIN3AQ96ST3 1273 aa21.4■■□□□ 1.02
POLR2B-205ENST00000441246 HIRIP3Q9BW71 556 aaPredicted RBP21.4■■□□□ 1.02
POLR2B-205ENST00000441246 ARHGAP35Q9NRY4 1499 aa21.39■■□□□ 1.02
POLR2B-205ENST00000441246 TRIM52Q96A61 297 aa21.37■■□□□ 1.01
POLR2B-205ENST00000441246 PPP1R15AO75807 674 aaPredicted RBP21.36■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 274 ms