RNA–Protein interactions for RNA: ENST00000346403.10

SNRPN-201, Transcript of small nuclear ribonucleoprotein polypeptide N, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SNRPN, Length 1,304 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPN-201ENST00000346403 NISCHQ9Y2I1 1504 aa38.82■■■■□ 3.8
SNRPN-201ENST00000346403 CCDC180Q9P1Z9 1646 aa34.64■■■■□ 3.14
SNRPN-201ENST00000346403 ABCC9O60706 1549 aa34.26■■■■□ 3.07
SNRPN-201ENST00000346403 RB1CC1Q8TDY2 1594 aa32.81■■■□□ 2.84
SNRPN-201ENST00000346403 NACADO15069 1562 aa32.69■■■□□ 2.82
SNRPN-201ENST00000346403 DCAF8L2P0C7V8 631 aa32.65■■■□□ 2.82
SNRPN-201ENST00000346403 MYO15BQ96JP2 1530 aa32.39■■■□□ 2.78
SNRPN-201ENST00000346403 ZCCHC6Q5VYS8 1495 aaKnown RBP32.26■■■□□ 2.75
SNRPN-201ENST00000346403 DCAF1Q9Y4B6 1507 aa32.11■■■□□ 2.73
SNRPN-201ENST00000346403 PABPN1Q86U42 306 aaKnown RBP eCLIP31.98■■■□□ 2.71
SNRPN-201ENST00000346403 UNC13AQ9UPW8 1703 aa31.93■■■□□ 2.7
SNRPN-201ENST00000346403 BICRAQ9NZM4 1560 aa31.77■■■□□ 2.68
SNRPN-201ENST00000346403 DNAJC5BQ9UF47 199 aa31.74■■■□□ 2.67
SNRPN-201ENST00000346403 SCRIBQ14160 1630 aa31.58■■■□□ 2.65
SNRPN-201ENST00000346403 SHROOM4Q9ULL8 1493 aa31.5■■■□□ 2.63
SNRPN-201ENST00000346403 EIF4G1Q04637 1599 aaKnown RBP31■■■□□ 2.55
SNRPN-201ENST00000346403 CC2D2AQ9P2K1 1620 aa30.94■■■□□ 2.54
SNRPN-201ENST00000346403 CECR2Q9BXF3 1484 aa30.84■■■□□ 2.53
SNRPN-201ENST00000346403 SMARCA4P51532 1647 aa30.18■■■□□ 2.42
SNRPN-201ENST00000346403 NCAPD3P42695 1498 aa30.18■■■□□ 2.42
SNRPN-201ENST00000346403 BAZ1AQ9NRL2 1556 aaPredicted RBP30.13■■■□□ 2.41
SNRPN-201ENST00000346403 ATAD2BQ9ULI0 1458 aa30.13■■■□□ 2.41
SNRPN-201ENST00000346403 SMARCA2P51531 1590 aa30.09■■■□□ 2.41
SNRPN-201ENST00000346403 HMGXB3Q12766 1538 aa29.98■■■□□ 2.39
SNRPN-201ENST00000346403 MROH2BQ7Z745 1585 aa29.89■■■□□ 2.38
SNRPN-201ENST00000346403 PEG3Q9GZU2 1588 aa29.89■■■□□ 2.38
SNRPN-201ENST00000346403 BAZ1BQ9UIG0 1483 aaKnown RBP29.89■■■□□ 2.37
SNRPN-201ENST00000346403 ERCC6Q03468 1493 aa29.6■■■□□ 2.33
SNRPN-201ENST00000346403 WIZO95785 1651 aa29.53■■■□□ 2.32
SNRPN-201ENST00000346403 NESP48681 1621 aa29.52■■■□□ 2.32
SNRPN-201ENST00000346403 RSF1Q96T23 1441 aaPredicted RBP29.45■■■□□ 2.3
SNRPN-201ENST00000346403 LAMC3Q9Y6N6 1575 aa29.42■■■□□ 2.3
SNRPN-201ENST00000346403 CUX2O14529 1486 aa29.4■■■□□ 2.3
SNRPN-201ENST00000346403 CADPSQ9ULU8 1353 aa29.29■■■□□ 2.28
SNRPN-201ENST00000346403 PDS5BQ9NTI5 1447 aa29.29■■■□□ 2.28
SNRPN-201ENST00000346403 TOP2AP11388 1531 aaKnown RBP29.24■■■□□ 2.27
SNRPN-201ENST00000346403 THOC2Q8NI27 1593 aaKnown RBP29.13■■■□□ 2.25
SNRPN-201ENST00000346403 KIF21AQ7Z4S6 1674 aa29.12■■■□□ 2.25
SNRPN-201ENST00000346403 CFTRP13569 1480 aa29.02■■■□□ 2.24
SNRPN-201ENST00000346403 MRC2Q9UBG0 1479 aa28.97■■■□□ 2.23
SNRPN-201ENST00000346403 FANCD2Q9BXW9 1451 aa28.95■■■□□ 2.22
SNRPN-201ENST00000346403 CEP164Q9UPV0 1460 aa28.95■■■□□ 2.22
SNRPN-201ENST00000346403 DNAJC5Q9H3Z4 198 aa28.92■■■□□ 2.22
SNRPN-201ENST00000346403 CCDC88BA6NC98 1476 aa28.9■■■□□ 2.22
SNRPN-201ENST00000346403 WDR62O43379 1518 aa28.87■■■□□ 2.21
SNRPN-201ENST00000346403 PRDM2Q13029 1718 aa28.68■■■□□ 2.18
SNRPN-201ENST00000346403 URB2Q14146 1524 aaKnown RBP28.65■■■□□ 2.18
SNRPN-201ENST00000346403 SUPT5HO00267 1087 aaKnown RBP28.48■■■□□ 2.15
SNRPN-201ENST00000346403 ABCC8Q09428 1581 aa28.46■■■□□ 2.15
SNRPN-201ENST00000346403 TOPBP1Q92547 1522 aa28.42■■■□□ 2.14
SNRPN-201ENST00000346403 IFT140Q96RY7 1462 aa28.36■■■□□ 2.13
SNRPN-201ENST00000346403 DNMBPQ6XZF7 1577 aa28.36■■■□□ 2.13
SNRPN-201ENST00000346403 ZNF608Q9ULD9 1512 aaPredicted RBP28.22■■■□□ 2.11
SNRPN-201ENST00000346403 POLA1P09884 1462 aaPredicted RBP28.16■■■□□ 2.1
SNRPN-201ENST00000346403 OSCARQ8IYS5 282 aa28.16■■■□□ 2.1
SNRPN-201ENST00000346403 TARBP1Q13395 1621 aaKnown RBP28.11■■■□□ 2.09
SNRPN-201ENST00000346403 EIF4G3O43432 1585 aaKnown RBP28.08■■■□□ 2.09
SNRPN-201ENST00000346403 SOGA1O94964 1423 aa28.08■■■□□ 2.09
SNRPN-201ENST00000346403 CUX1P39880 1505 aa28.06■■■□□ 2.08
SNRPN-201ENST00000346403 FGD5Q6ZNL6 1462 aa28.05■■■□□ 2.08
SNRPN-201ENST00000346403 AQRO60306 1485 aaKnown RBP eCLIP28.04■■■□□ 2.081e-6■□□□□ 10.6
SNRPN-201ENST00000346403 RAD54L2Q9Y4B4 1467 aa28.04■■■□□ 2.08
SNRPN-201ENST00000346403 TDRD9Q8NDG6 1382 aaKnown RBP27.96■■■□□ 2.07
SNRPN-201ENST00000346403 WDR97A6NE52 1622 aa27.91■■■□□ 2.06
SNRPN-201ENST00000346403 FBLN2P98095 1184 aa27.83■■■□□ 2.05
SNRPN-201ENST00000346403 TRIM41Q8WV44 630 aa27.82■■■□□ 2.04
SNRPN-201ENST00000346403 WRNQ14191 1432 aaPredicted RBP eCLIP27.81■■■□□ 2.04
SNRPN-201ENST00000346403 GRIN2BQ13224 1484 aa27.79■■■□□ 2.04
SNRPN-201ENST00000346403 SNAPC4Q5SXM2 1469 aa27.77■■■□□ 2.04
SNRPN-201ENST00000346403 CHD1O14646 1710 aa27.77■■■□□ 2.04
SNRPN-201ENST00000346403 ABCA10Q8WWZ4 1543 aa27.76■■■□□ 2.04
SNRPN-201ENST00000346403 MAGI1Q96QZ7 1491 aaPredicted RBP27.75■■■□□ 2.03
SNRPN-201ENST00000346403 TOP2BQ02880 1626 aa27.74■■■□□ 2.03
SNRPN-201ENST00000346403 GAPVD1Q14C86 1478 aa27.73■■■□□ 2.03
SNRPN-201ENST00000346403 BIVM-ERCC5R4GMW8 1640 aa27.72■■■□□ 2.03
SNRPN-201ENST00000346403 CHMP7Q8WUX9 453 aaPredicted RBP27.7■■■□□ 2.03
SNRPN-201ENST00000346403 SYNJ1O43426 1573 aa27.69■■■□□ 2.02
SNRPN-201ENST00000346403 RIMBP3CA6NJZ7 1639 aa27.65■■■□□ 2.02
SNRPN-201ENST00000346403 RIMBP3BA6NNM3 1639 aa27.65■■■□□ 2.02
SNRPN-201ENST00000346403 ABCA5Q8WWZ7 1642 aa27.65■■■□□ 2.02
SNRPN-201ENST00000346403 RIMBP3Q9UFD9 1639 aa27.65■■■□□ 2.02
SNRPN-201ENST00000346403 ARHGEF11O15085 1522 aa27.64■■■□□ 2.02
SNRPN-201ENST00000346403 SYNJ2O15056 1496 aa27.64■■■□□ 2.02
SNRPN-201ENST00000346403 PBRM1Q86U86 1689 aa27.62■■■□□ 2.01
SNRPN-201ENST00000346403 CLASP1Q7Z460 1538 aa27.5■■□□□ 1.99
SNRPN-201ENST00000346403 CYB5RLQ6IPT4 315 aa27.44■■□□□ 1.98
SNRPN-201ENST00000346403 ERICH3Q5RHP9 1530 aa27.43■■□□□ 1.98
SNRPN-201ENST00000346403 ADAMTS12P58397 1594 aa27.42■■□□□ 1.98
SNRPN-201ENST00000346403 GRIN2AQ12879 1464 aa27.42■■□□□ 1.98
SNRPN-201ENST00000346403 FHAD1B1AJZ9 1412 aa27.41■■□□□ 1.98
SNRPN-201ENST00000346403 ARAP1Q96P48 1450 aa27.38■■□□□ 1.97
SNRPN-201ENST00000346403 NUP160Q12769 1436 aa27.3■■□□□ 1.96
SNRPN-201ENST00000346403 KIF27Q86VH2 1401 aa27.28■■□□□ 1.96
SNRPN-201ENST00000346403 CEP170Q5SW79 1584 aa27.25■■□□□ 1.95
SNRPN-201ENST00000346403 IGF1RP08069 1367 aa27.17■■□□□ 1.94
SNRPN-201ENST00000346403 SHROOM2Q13796 1616 aa27.1■■□□□ 1.93
SNRPN-201ENST00000346403 CUL7Q14999 1698 aa27.09■■□□□ 1.93
SNRPN-201ENST00000346403 ERCC6L2Q5T890 1561 aa27.06■■□□□ 1.92
SNRPN-201ENST00000346403 JPH4Q96JJ6 628 aa27.05■■□□□ 1.92
SNRPN-201ENST00000346403 TRHP20396 242 aaPredicted RBP27.04■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms