RNA–Protein interactions for RNA: ENST00000427314.6

RACGAP1-202, Transcript of Rac GTPase activating protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RACGAP1, Length 3,229 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RACGAP1-202ENST00000427314 NISCHQ9Y2I1 1504 aa10.8□□□□□ -0.68
RACGAP1-202ENST00000427314 CHIC1Q5VXU3 224 aa10.76□□□□□ -0.69
RACGAP1-202ENST00000427314 AEBP2Q6ZN18 517 aaPredicted RBP10.66□□□□□ -0.7
RACGAP1-202ENST00000427314 CCDC180Q9P1Z9 1646 aa10.3□□□□□ -0.76
RACGAP1-202ENST00000427314 MYO15BQ96JP2 1530 aa9.73□□□□□ -0.85
RACGAP1-202ENST00000427314 PHF23Q9BUL5 403 aaPredicted RBP9.7□□□□□ -0.86
RACGAP1-202ENST00000427314 SHROOM4Q9ULL8 1493 aa9.55□□□□□ -0.88
RACGAP1-202ENST00000427314 DCAF1Q9Y4B6 1507 aa9.5□□□□□ -0.89
RACGAP1-202ENST00000427314 NACADO15069 1562 aa9.42□□□□□ -0.9
RACGAP1-202ENST00000427314 RB1CC1Q8TDY2 1594 aa9.32□□□□□ -0.92
RACGAP1-202ENST00000427314 UNC13AQ9UPW8 1703 aa9.31□□□□□ -0.92
RACGAP1-202ENST00000427314 SLC24A1O60721 1099 aa9.14□□□□□ -0.95
RACGAP1-202ENST00000427314 ZCCHC6Q5VYS8 1495 aaKnown RBP9.08□□□□□ -0.96
RACGAP1-202ENST00000427314 EHMT2Q96KQ7 1210 aa9.08□□□□□ -0.96
RACGAP1-202ENST00000427314 BICRAQ9NZM4 1560 aa9.08□□□□□ -0.96
RACGAP1-202ENST00000427314 PLPPR3Q6T4P5 718 aa8.99□□□□□ -0.97
RACGAP1-202ENST00000427314 ABCC9O60706 1549 aa8.97□□□□□ -0.97
RACGAP1-202ENST00000427314 PEG3Q9GZU2 1588 aa8.83□□□□□ -1
RACGAP1-202ENST00000427314 ADRA2BP18089 450 aa8.74□□□□□ -1.01
RACGAP1-202ENST00000427314 KCNA4P22459 653 aa8.74□□□□□ -1.01
RACGAP1-202ENST00000427314 SMARCA2P51531 1590 aa8.74□□□□□ -1.01
RACGAP1-202ENST00000427314 SENP3Q9H4L4 574 aaPredicted RBP8.71□□□□□ -1.02
RACGAP1-202ENST00000427314 HMGXB3Q12766 1538 aa8.69□□□□□ -1.02
RACGAP1-202ENST00000427314 EIF4G1Q04637 1599 aaKnown RBP8.69□□□□□ -1.02
RACGAP1-202ENST00000427314 PRDM2Q13029 1718 aa8.65□□□□□ -1.03
RACGAP1-202ENST00000427314 CC2D2AQ9P2K1 1620 aa8.62□□□□□ -1.03
RACGAP1-202ENST00000427314 NCAPD3P42695 1498 aa8.53□□□□□ -1.04
RACGAP1-202ENST00000427314 SMARCA4P51532 1647 aa8.5□□□□□ -1.05
RACGAP1-202ENST00000427314 PPP6R1Q9UPN7 881 aa8.48□□□□□ -1.05
RACGAP1-202ENST00000427314 CUX2O14529 1486 aa8.47□□□□□ -1.05
RACGAP1-202ENST00000427314 SCRIBQ14160 1630 aa8.46□□□□□ -1.06
RACGAP1-202ENST00000427314 WDR97A6NE52 1622 aa8.45□□□□□ -1.06
RACGAP1-202ENST00000427314 LAMC3Q9Y6N6 1575 aa8.45□□□□□ -1.06
RACGAP1-202ENST00000427314 BAZ1AQ9NRL2 1556 aaPredicted RBP8.44□□□□□ -1.06
RACGAP1-202ENST00000427314 CSRNP3Q8WYN3 585 aa8.44□□□□□ -1.06
RACGAP1-202ENST00000427314 THOC2Q8NI27 1593 aaKnown RBP8.41□□□□□ -1.06
RACGAP1-202ENST00000427314 DAXXQ9UER7 740 aaPredicted RBP8.37□□□□□ -1.07
RACGAP1-202ENST00000427314 CECR2Q9BXF3 1484 aa8.35□□□□□ -1.07
RACGAP1-202ENST00000427314 SLC4A1APQ9BWU0 796 aaKnown RBP8.32□□□□□ -1.08
RACGAP1-202ENST00000427314 ATAD2BQ9ULI0 1458 aa8.3□□□□□ -1.08
RACGAP1-202ENST00000427314 WDR62O43379 1518 aa8.28□□□□□ -1.08
RACGAP1-202ENST00000427314 DNAJC5BQ9UF47 199 aa8.24□□□□□ -1.09
RACGAP1-202ENST00000427314 BAZ1BQ9UIG0 1483 aaKnown RBP8.22□□□□□ -1.09
RACGAP1-202ENST00000427314 TOP2AP11388 1531 aaKnown RBP8.21□□□□□ -1.1
RACGAP1-202ENST00000427314 KIF21AQ7Z4S6 1674 aa8.2□□□□□ -1.1
RACGAP1-202ENST00000427314 FOXD1Q16676 465 aa8.2□□□□□ -1.1
RACGAP1-202ENST00000427314 NCBP3Q53F19 620 aaKnown RBP8.19□□□□□ -1.1
RACGAP1-202ENST00000427314 TTBK1Q5TCY1 1321 aaPredicted RBP8.19□□□□□ -1.1
RACGAP1-202ENST00000427314 MYT1Q01538 1121 aa8.14□□□□□ -1.11
RACGAP1-202ENST00000427314 RTN4Q9NQC3 1192 aaKnown RBP8.12□□□□□ -1.11
RACGAP1-202ENST00000427314 CFTRP13569 1480 aa8.1□□□□□ -1.11
RACGAP1-202ENST00000427314 ABCC8Q09428 1581 aa8.09□□□□□ -1.11
RACGAP1-202ENST00000427314 PPP4R3CPQ6ZMV5 832 aa8.09□□□□□ -1.11
RACGAP1-202ENST00000427314 MROH2BQ7Z745 1585 aa8.08□□□□□ -1.12
RACGAP1-202ENST00000427314 ZBTB22O15209 634 aa8.07□□□□□ -1.12
RACGAP1-202ENST00000427314 MRC2Q9UBG0 1479 aa8.05□□□□□ -1.12
RACGAP1-202ENST00000427314 APLP2Q06481 763 aa8.03□□□□□ -1.12
RACGAP1-202ENST00000427314 PELP1Q8IZL8 1130 aaKnown RBP8.02□□□□□ -1.13
RACGAP1-202ENST00000427314 WIZO95785 1651 aa8.02□□□□□ -1.13
RACGAP1-202ENST00000427314 TARBP1Q13395 1621 aaKnown RBP8.02□□□□□ -1.13
RACGAP1-202ENST00000427314 AMER1Q5JTC6 1135 aaPredicted RBP8.01□□□□□ -1.13
RACGAP1-202ENST00000427314 PDS5BQ9NTI5 1447 aa8.01□□□□□ -1.13
RACGAP1-202ENST00000427314 DNMBPQ6XZF7 1577 aa8□□□□□ -1.13
RACGAP1-202ENST00000427314 BIVM-ERCC5R4GMW8 1640 aa8□□□□□ -1.13
RACGAP1-202ENST00000427314 NPM3O75607 178 aaKnown RBP7.97□□□□□ -1.13
RACGAP1-202ENST00000427314 CADPSQ9ULU8 1353 aa7.96□□□□□ -1.13
RACGAP1-202ENST00000427314 DCAF8L2P0C7V8 631 aa7.95□□□□□ -1.14
RACGAP1-202ENST00000427314 SHROOM2Q13796 1616 aa7.93□□□□□ -1.14
RACGAP1-202ENST00000427314 PIAS4Q8N2W9 510 aaPredicted RBP7.93□□□□□ -1.14
RACGAP1-202ENST00000427314 PABPN1Q86U42 306 aaKnown RBP eCLIP7.93□□□□□ -1.14
RACGAP1-202ENST00000427314 NESP48681 1621 aa7.93□□□□□ -1.14
RACGAP1-202ENST00000427314 ABCA5Q8WWZ7 1642 aa7.92□□□□□ -1.14
RACGAP1-202ENST00000427314 ERICH6Q7L0X2 663 aa7.91□□□□□ -1.14
RACGAP1-202ENST00000427314 PRKCSHP14314 528 aaPredicted RBP7.91□□□□□ -1.14
RACGAP1-202ENST00000427314 CLASP1Q7Z460 1538 aa7.91□□□□□ -1.14
RACGAP1-202ENST00000427314 RSF1Q96T23 1441 aaPredicted RBP7.91□□□□□ -1.14
RACGAP1-202ENST00000427314 IFT140Q96RY7 1462 aa7.9□□□□□ -1.14
RACGAP1-202ENST00000427314 CEP164Q9UPV0 1460 aa7.9□□□□□ -1.14
RACGAP1-202ENST00000427314 PBRM1Q86U86 1689 aa7.9□□□□□ -1.15
RACGAP1-202ENST00000427314 ARXQ96QS3 562 aa7.9□□□□□ -1.15
RACGAP1-202ENST00000427314 URB2Q14146 1524 aaKnown RBP7.86□□□□□ -1.15
RACGAP1-202ENST00000427314 EIF4G3O43432 1585 aaKnown RBP7.85□□□□□ -1.15
RACGAP1-202ENST00000427314 FANCD2Q9BXW9 1451 aa7.84□□□□□ -1.15
RACGAP1-202ENST00000427314 DNAJC5Q9H3Z4 198 aa7.83□□□□□ -1.16
RACGAP1-202ENST00000427314 CHD1O14646 1710 aa7.83□□□□□ -1.16
RACGAP1-202ENST00000427314 TOP2BQ02880 1626 aa7.81□□□□□ -1.16
RACGAP1-202ENST00000427314 TOPBP1Q92547 1522 aa7.81□□□□□ -1.16
RACGAP1-202ENST00000427314 MAGI1Q96QZ7 1491 aaPredicted RBP7.79□□□□□ -1.16
RACGAP1-202ENST00000427314 ERCC6Q03468 1493 aa7.78□□□□□ -1.16
RACGAP1-202ENST00000427314 CCDC88BA6NC98 1476 aa7.77□□□□□ -1.17
RACGAP1-202ENST00000427314 ERICH3Q5RHP9 1530 aa7.77□□□□□ -1.17
RACGAP1-202ENST00000427314 ABCA10Q8WWZ4 1543 aa7.76□□□□□ -1.17
RACGAP1-202ENST00000427314 CUL7Q14999 1698 aa7.76□□□□□ -1.17
RACGAP1-202ENST00000427314 RIMBP3CA6NJZ7 1639 aa7.75□□□□□ -1.17
RACGAP1-202ENST00000427314 RIMBP3BA6NNM3 1639 aa7.75□□□□□ -1.17
RACGAP1-202ENST00000427314 RIMBP3Q9UFD9 1639 aa7.75□□□□□ -1.17
RACGAP1-202ENST00000427314 ADAMTS12P58397 1594 aa7.74□□□□□ -1.17
RACGAP1-202ENST00000427314 SYNJ1O43426 1573 aa7.72□□□□□ -1.17
RACGAP1-202ENST00000427314 TIMELESSQ9UNS1 1208 aa7.7□□□□□ -1.18
RACGAP1-202ENST00000427314 CUX1P39880 1505 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms