RNA–Protein interactions for RNA: ENST00000552157.5

RACGAP1-226, Transcript of Rac GTPase activating protein 1, humanhuman

TSL 3

Gene RACGAP1, Length 386 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RACGAP1-226ENST00000552157 DNAJC5BQ9UF47 199 aa14.84□□□□□ -0.03
RACGAP1-226ENST00000552157 ABCC9O60706 1549 aa14.76□□□□□ -0.05
RACGAP1-226ENST00000552157 DNAJC5Q9H3Z4 198 aa14.51□□□□□ -0.09
RACGAP1-226ENST00000552157 NISCHQ9Y2I1 1504 aa14.44□□□□□ -0.1
RACGAP1-226ENST00000552157 CCDC180Q9P1Z9 1646 aa13.58□□□□□ -0.24
RACGAP1-226ENST00000552157 RB1CC1Q8TDY2 1594 aa13.49□□□□□ -0.25
RACGAP1-226ENST00000552157 PABPN1Q86U42 306 aaKnown RBP eCLIP13.49□□□□□ -0.25
RACGAP1-226ENST00000552157 TRIM41Q8WV44 630 aa13.47□□□□□ -0.25
RACGAP1-226ENST00000552157 CECR2Q9BXF3 1484 aa13.4□□□□□ -0.26
RACGAP1-226ENST00000552157 UNC13AQ9UPW8 1703 aa13.28□□□□□ -0.28
RACGAP1-226ENST00000552157 CC2D2AQ9P2K1 1620 aa13.28□□□□□ -0.28
RACGAP1-226ENST00000552157 CUX2O14529 1486 aa13.19□□□□□ -0.3
RACGAP1-226ENST00000552157 BICRAQ9NZM4 1560 aa13.14□□□□□ -0.31
RACGAP1-226ENST00000552157 NACADO15069 1562 aa13.07□□□□□ -0.32
RACGAP1-226ENST00000552157 AEBP2Q6ZN18 517 aaPredicted RBP13.02□□□□□ -0.33
RACGAP1-226ENST00000552157 EIF4G1Q04637 1599 aaKnown RBP12.93□□□□□ -0.34
RACGAP1-226ENST00000552157 ERCC6Q03468 1493 aa12.85□□□□□ -0.35
RACGAP1-226ENST00000552157 SHROOM4Q9ULL8 1493 aa12.78□□□□□ -0.36
RACGAP1-226ENST00000552157 DCAF8L2P0C7V8 631 aa12.72□□□□□ -0.37
RACGAP1-226ENST00000552157 ILDR1Q86SU0 546 aaPredicted RBP12.72□□□□□ -0.37
RACGAP1-226ENST00000552157 THOC2Q8NI27 1593 aaKnown RBP12.48□□□□□ -0.41
RACGAP1-226ENST00000552157 TRHP20396 242 aaPredicted RBP12.45□□□□□ -0.42
RACGAP1-226ENST00000552157 RIMBP3CA6NJZ7 1639 aa12.43□□□□□ -0.42
RACGAP1-226ENST00000552157 RIMBP3BA6NNM3 1639 aa12.43□□□□□ -0.42
RACGAP1-226ENST00000552157 RIMBP3Q9UFD9 1639 aa12.43□□□□□ -0.42
RACGAP1-226ENST00000552157 BAZ1AQ9NRL2 1556 aaPredicted RBP12.43□□□□□ -0.42
RACGAP1-226ENST00000552157 MYO15BQ96JP2 1530 aa12.41□□□□□ -0.42
RACGAP1-226ENST00000552157 SCRIBQ14160 1630 aa12.33□□□□□ -0.43
RACGAP1-226ENST00000552157 NESP48681 1621 aa12.32□□□□□ -0.44
RACGAP1-226ENST00000552157 OSCARQ8IYS5 282 aa12.31□□□□□ -0.44
RACGAP1-226ENST00000552157 SMARCA2P51531 1590 aa12.3□□□□□ -0.44
RACGAP1-226ENST00000552157 ARHGEF11O15085 1522 aa12.22□□□□□ -0.45
RACGAP1-226ENST00000552157 KIF21AQ7Z4S6 1674 aa12.2□□□□□ -0.46
RACGAP1-226ENST00000552157 CYB5RLQ6IPT4 315 aa12.15□□□□□ -0.46
RACGAP1-226ENST00000552157 NCAPD3P42695 1498 aa12.02□□□□□ -0.48
RACGAP1-226ENST00000552157 LMTK3Q96Q04 1460 aa12.02□□□□□ -0.48
RACGAP1-226ENST00000552157 LAMC3Q9Y6N6 1575 aa12.02□□□□□ -0.49
RACGAP1-226ENST00000552157 ARAP1Q96P48 1450 aa12.01□□□□□ -0.49
RACGAP1-226ENST00000552157 WDR62O43379 1518 aa11.99□□□□□ -0.49
RACGAP1-226ENST00000552157 MRC2Q9UBG0 1479 aa11.97□□□□□ -0.49
RACGAP1-226ENST00000552157 PDS5BQ9NTI5 1447 aa11.94□□□□□ -0.5
RACGAP1-226ENST00000552157 SOCS7O14512 581 aa11.94□□□□□ -0.5
RACGAP1-226ENST00000552157 HMGXB3Q12766 1538 aa11.89□□□□□ -0.51
RACGAP1-226ENST00000552157 ERCC6L2Q5T890 1561 aa11.88□□□□□ -0.51
RACGAP1-226ENST00000552157 FBXO41Q8TF61 875 aa11.87□□□□□ -0.51
RACGAP1-226ENST00000552157 ATAD2BQ9ULI0 1458 aa11.84□□□□□ -0.51
RACGAP1-226ENST00000552157 DCAF1Q9Y4B6 1507 aa11.82□□□□□ -0.52
RACGAP1-226ENST00000552157 ILDR2Q71H61 639 aa11.81□□□□□ -0.52
RACGAP1-226ENST00000552157 KDM4FA0A1W2PPD8 638 aa11.78□□□□□ -0.52
RACGAP1-226ENST00000552157 HECW2Q9P2P5 1572 aa11.75□□□□□ -0.53
RACGAP1-226ENST00000552157 ZCCHC6Q5VYS8 1495 aaKnown RBP11.72□□□□□ -0.53
RACGAP1-226ENST00000552157 RSF1Q96T23 1441 aaPredicted RBP11.72□□□□□ -0.53
RACGAP1-226ENST00000552157 CHD1O14646 1710 aa11.72□□□□□ -0.53
RACGAP1-226ENST00000552157 BAZ1BQ9UIG0 1483 aaKnown RBP11.7□□□□□ -0.54
RACGAP1-226ENST00000552157 DISP3Q9P2K9 1392 aa11.68□□□□□ -0.54
RACGAP1-226ENST00000552157 CEP164Q9UPV0 1460 aa11.68□□□□□ -0.54
RACGAP1-226ENST00000552157 SMARCA4P51532 1647 aa11.64□□□□□ -0.55
RACGAP1-226ENST00000552157 CADPSQ9ULU8 1353 aa11.6□□□□□ -0.55
RACGAP1-226ENST00000552157 ZNF608Q9ULD9 1512 aaPredicted RBP11.59□□□□□ -0.55
RACGAP1-226ENST00000552157 KIF13AQ9H1H9 1805 aa11.58□□□□□ -0.56
RACGAP1-226ENST00000552157 SYNJ2O15056 1496 aa11.55□□□□□ -0.56
RACGAP1-226ENST00000552157 FANCD2Q9BXW9 1451 aa11.53□□□□□ -0.56
RACGAP1-226ENST00000552157 EIF4G3O43432 1585 aaKnown RBP11.53□□□□□ -0.56
RACGAP1-226ENST00000552157 URB2Q14146 1524 aaKnown RBP11.52□□□□□ -0.57
RACGAP1-226ENST00000552157 SPATA31D1Q6ZQQ2 1576 aa11.51□□□□□ -0.57
RACGAP1-226ENST00000552157 FBLN2P98095 1184 aa11.49□□□□□ -0.57
RACGAP1-226ENST00000552157 ADGRL1O94910 1474 aa11.49□□□□□ -0.57
RACGAP1-226ENST00000552157 KDM6BO15054 1643 aa11.48□□□□□ -0.57
RACGAP1-226ENST00000552157 CLASP1Q7Z460 1538 aa11.46□□□□□ -0.57
RACGAP1-226ENST00000552157 IFT140Q96RY7 1462 aa11.46□□□□□ -0.57
RACGAP1-226ENST00000552157 GAPVD1Q14C86 1478 aa11.44□□□□□ -0.58
RACGAP1-226ENST00000552157 PEG3Q9GZU2 1588 aa11.43□□□□□ -0.58
RACGAP1-226ENST00000552157 SYNJ1O43426 1573 aa11.36□□□□□ -0.59
RACGAP1-226ENST00000552157 AQRO60306 1485 aaKnown RBP eCLIP11.3□□□□□ -0.6
RACGAP1-226ENST00000552157 TSPOAP1O95153 1857 aa11.29□□□□□ -0.6
RACGAP1-226ENST00000552157 FAM69CQ0P6D2 419 aa11.26□□□□□ -0.61
RACGAP1-226ENST00000552157 ABCC10Q5T3U5 1492 aa11.23□□□□□ -0.61
RACGAP1-226ENST00000552157 DIP2BQ9P265 1576 aa11.23□□□□□ -0.61
RACGAP1-226ENST00000552157 CFTRP13569 1480 aa11.22□□□□□ -0.61
RACGAP1-226ENST00000552157 TARBP1Q13395 1621 aaKnown RBP11.2□□□□□ -0.62
RACGAP1-226ENST00000552157 SNAPC4Q5SXM2 1469 aa11.19□□□□□ -0.62
RACGAP1-226ENST00000552157 TOPBP1Q92547 1522 aa11.18□□□□□ -0.62
RACGAP1-226ENST00000552157 PRDM2Q13029 1718 aa11.18□□□□□ -0.62
RACGAP1-226ENST00000552157 MROH2BQ7Z745 1585 aa11.17□□□□□ -0.62
RACGAP1-226ENST00000552157 CHMP7Q8WUX9 453 aaPredicted RBP11.16□□□□□ -0.62
RACGAP1-226ENST00000552157 CERKQ8TCT0 537 aa11.15□□□□□ -0.62
RACGAP1-226ENST00000552157 TOP2BQ02880 1626 aa11.15□□□□□ -0.62
RACGAP1-226ENST00000552157 MAPKBP1O60336 1514 aa11.09□□□□□ -0.63
RACGAP1-226ENST00000552157 MAGI1Q96QZ7 1491 aaPredicted RBP11.07□□□□□ -0.64
RACGAP1-226ENST00000552157 DNMBPQ6XZF7 1577 aa11.06□□□□□ -0.64
RACGAP1-226ENST00000552157 CEP170Q5SW79 1584 aa11.05□□□□□ -0.64
RACGAP1-226ENST00000552157 PCF11O94913 1555 aaKnown RBP11.03□□□□□ -0.64
RACGAP1-226ENST00000552157 ABCC8Q09428 1581 aa11.03□□□□□ -0.64
RACGAP1-226ENST00000552157 TDRD9Q8NDG6 1382 aaKnown RBP11.03□□□□□ -0.64
RACGAP1-226ENST00000552157 WIZO95785 1651 aa11□□□□□ -0.65
RACGAP1-226ENST00000552157 PPRC1Q5VV67 1664 aaKnown RBP11□□□□□ -0.65
RACGAP1-226ENST00000552157 NPM1P06748 294 aaKnown RBP eCLIP10.99□□□□□ -0.65
RACGAP1-226ENST00000552157 POLA1P09884 1462 aaPredicted RBP10.98□□□□□ -0.65
RACGAP1-226ENST00000552157 WDR97A6NE52 1622 aa10.98□□□□□ -0.65
RACGAP1-226ENST00000552157 RAD54L2Q9Y4B4 1467 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms