RNA–Protein interactions for RNA: ENST00000390687.8

SNRPN-202, Transcript of small nuclear ribonucleoprotein polypeptide N, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPN, Length 1,528 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPN-202ENST00000390687 NISCHQ9Y2I1 1504 aa36.55■■■■□ 3.44
SNRPN-202ENST00000390687 CCDC180Q9P1Z9 1646 aa32.51■■■□□ 2.8
SNRPN-202ENST00000390687 ABCC9O60706 1549 aa32.15■■■□□ 2.74
SNRPN-202ENST00000390687 RB1CC1Q8TDY2 1594 aa30.75■■■□□ 2.51
SNRPN-202ENST00000390687 DCAF8L2P0C7V8 631 aa30.74■■■□□ 2.51
SNRPN-202ENST00000390687 NACADO15069 1562 aa30.68■■■□□ 2.5
SNRPN-202ENST00000390687 MYO15BQ96JP2 1530 aa30.41■■■□□ 2.46
SNRPN-202ENST00000390687 ZCCHC6Q5VYS8 1495 aaKnown RBP30.37■■■□□ 2.45
SNRPN-202ENST00000390687 DCAF1Q9Y4B6 1507 aa30.2■■■□□ 2.42
SNRPN-202ENST00000390687 PABPN1Q86U42 306 aaKnown RBP eCLIP30.07■■■□□ 2.4
SNRPN-202ENST00000390687 UNC13AQ9UPW8 1703 aa30.06■■■□□ 2.4
SNRPN-202ENST00000390687 BICRAQ9NZM4 1560 aa29.88■■■□□ 2.37
SNRPN-202ENST00000390687 DNAJC5BQ9UF47 199 aa29.84■■■□□ 2.37
SNRPN-202ENST00000390687 SCRIBQ14160 1630 aa29.7■■■□□ 2.35
SNRPN-202ENST00000390687 SHROOM4Q9ULL8 1493 aa29.46■■■□□ 2.31
SNRPN-202ENST00000390687 EIF4G1Q04637 1599 aaKnown RBP29.1■■■□□ 2.25
SNRPN-202ENST00000390687 CC2D2AQ9P2K1 1620 aa29.04■■■□□ 2.24
SNRPN-202ENST00000390687 CECR2Q9BXF3 1484 aa28.9■■■□□ 2.22
SNRPN-202ENST00000390687 SMARCA4P51532 1647 aa28.38■■■□□ 2.13
SNRPN-202ENST00000390687 NCAPD3P42695 1498 aa28.36■■■□□ 2.13
SNRPN-202ENST00000390687 ATAD2BQ9ULI0 1458 aa28.34■■■□□ 2.13
SNRPN-202ENST00000390687 BAZ1AQ9NRL2 1556 aaPredicted RBP28.31■■■□□ 2.12
SNRPN-202ENST00000390687 SMARCA2P51531 1590 aa28.23■■■□□ 2.11
SNRPN-202ENST00000390687 MROH2BQ7Z745 1585 aa28.18■■■□□ 2.1
SNRPN-202ENST00000390687 HMGXB3Q12766 1538 aa28.13■■■□□ 2.09
SNRPN-202ENST00000390687 PEG3Q9GZU2 1588 aa28.11■■■□□ 2.09
SNRPN-202ENST00000390687 BAZ1BQ9UIG0 1483 aaKnown RBP28.06■■■□□ 2.08
SNRPN-202ENST00000390687 WIZO95785 1651 aa27.85■■■□□ 2.05
SNRPN-202ENST00000390687 RSF1Q96T23 1441 aaPredicted RBP27.79■■■□□ 2.04
SNRPN-202ENST00000390687 NESP48681 1621 aa27.76■■■□□ 2.03
SNRPN-202ENST00000390687 ERCC6Q03468 1493 aa27.69■■■□□ 2.02
SNRPN-202ENST00000390687 LAMC3Q9Y6N6 1575 aa27.59■■■□□ 2.01
SNRPN-202ENST00000390687 CADPSQ9ULU8 1353 aa27.53■■■□□ 2
SNRPN-202ENST00000390687 TOP2AP11388 1531 aaKnown RBP27.5■■□□□ 1.99
SNRPN-202ENST00000390687 CUX2O14529 1486 aa27.48■■□□□ 1.99
SNRPN-202ENST00000390687 PDS5BQ9NTI5 1447 aa27.45■■□□□ 1.99
SNRPN-202ENST00000390687 KIF21AQ7Z4S6 1674 aa27.36■■□□□ 1.97
SNRPN-202ENST00000390687 THOC2Q8NI27 1593 aaKnown RBP27.32■■□□□ 1.96
SNRPN-202ENST00000390687 CFTRP13569 1480 aa27.3■■□□□ 1.96
SNRPN-202ENST00000390687 CCDC88BA6NC98 1476 aa27.25■■□□□ 1.95
SNRPN-202ENST00000390687 FANCD2Q9BXW9 1451 aa27.19■■□□□ 1.94
SNRPN-202ENST00000390687 MRC2Q9UBG0 1479 aa27.16■■□□□ 1.94
SNRPN-202ENST00000390687 CEP164Q9UPV0 1460 aa27.15■■□□□ 1.94
SNRPN-202ENST00000390687 WDR62O43379 1518 aa27.07■■□□□ 1.92
SNRPN-202ENST00000390687 DNAJC5Q9H3Z4 198 aa27.02■■□□□ 1.92
SNRPN-202ENST00000390687 SUPT5HO00267 1087 aaKnown RBP26.96■■□□□ 1.91
SNRPN-202ENST00000390687 PRDM2Q13029 1718 aa26.96■■□□□ 1.91
SNRPN-202ENST00000390687 URB2Q14146 1524 aaKnown RBP26.93■■□□□ 1.9
SNRPN-202ENST00000390687 TOPBP1Q92547 1522 aa26.72■■□□□ 1.87
SNRPN-202ENST00000390687 ABCC8Q09428 1581 aa26.69■■□□□ 1.86
SNRPN-202ENST00000390687 DNMBPQ6XZF7 1577 aa26.63■■□□□ 1.85
SNRPN-202ENST00000390687 IFT140Q96RY7 1462 aa26.6■■□□□ 1.85
SNRPN-202ENST00000390687 ZNF608Q9ULD9 1512 aaPredicted RBP26.55■■□□□ 1.84
SNRPN-202ENST00000390687 POLA1P09884 1462 aaPredicted RBP26.49■■□□□ 1.83
SNRPN-202ENST00000390687 TARBP1Q13395 1621 aaKnown RBP26.44■■□□□ 1.82
SNRPN-202ENST00000390687 CUX1P39880 1505 aa26.44■■□□□ 1.82
SNRPN-202ENST00000390687 RAD54L2Q9Y4B4 1467 aa26.41■■□□□ 1.82
SNRPN-202ENST00000390687 SOGA1O94964 1423 aa26.41■■□□□ 1.82
SNRPN-202ENST00000390687 OSCARQ8IYS5 282 aa26.39■■□□□ 1.82
SNRPN-202ENST00000390687 AQRO60306 1485 aaKnown RBP eCLIP26.38■■□□□ 1.811e-6■□□□□ 10.6
SNRPN-202ENST00000390687 FGD5Q6ZNL6 1462 aa26.38■■□□□ 1.81
SNRPN-202ENST00000390687 EIF4G3O43432 1585 aaKnown RBP26.36■■□□□ 1.81
SNRPN-202ENST00000390687 TDRD9Q8NDG6 1382 aaKnown RBP26.3■■□□□ 1.8
SNRPN-202ENST00000390687 WRNQ14191 1432 aaPredicted RBP eCLIP26.18■■□□□ 1.78
SNRPN-202ENST00000390687 WDR97A6NE52 1622 aa26.15■■□□□ 1.78
SNRPN-202ENST00000390687 FBLN2P98095 1184 aa26.14■■□□□ 1.77
SNRPN-202ENST00000390687 TOP2BQ02880 1626 aa26.12■■□□□ 1.77
SNRPN-202ENST00000390687 SYNJ1O43426 1573 aa26.12■■□□□ 1.77
SNRPN-202ENST00000390687 ABCA10Q8WWZ4 1543 aa26.11■■□□□ 1.77
SNRPN-202ENST00000390687 BIVM-ERCC5R4GMW8 1640 aa26.1■■□□□ 1.77
SNRPN-202ENST00000390687 GRIN2BQ13224 1484 aa26.08■■□□□ 1.77
SNRPN-202ENST00000390687 SNAPC4Q5SXM2 1469 aa26.08■■□□□ 1.76
SNRPN-202ENST00000390687 GAPVD1Q14C86 1478 aa26.07■■□□□ 1.76
SNRPN-202ENST00000390687 CHD1O14646 1710 aa26.07■■□□□ 1.76
SNRPN-202ENST00000390687 CHMP7Q8WUX9 453 aaPredicted RBP26.02■■□□□ 1.76
SNRPN-202ENST00000390687 TRIM41Q8WV44 630 aa26.02■■□□□ 1.76
SNRPN-202ENST00000390687 MAGI1Q96QZ7 1491 aaPredicted RBP26.02■■□□□ 1.76
SNRPN-202ENST00000390687 ABCA5Q8WWZ7 1642 aa26■■□□□ 1.75
SNRPN-202ENST00000390687 PBRM1Q86U86 1689 aa25.96■■□□□ 1.75
SNRPN-202ENST00000390687 SYNJ2O15056 1496 aa25.94■■□□□ 1.74
SNRPN-202ENST00000390687 RIMBP3CA6NJZ7 1639 aa25.91■■□□□ 1.74
SNRPN-202ENST00000390687 RIMBP3BA6NNM3 1639 aa25.91■■□□□ 1.74
SNRPN-202ENST00000390687 RIMBP3Q9UFD9 1639 aa25.91■■□□□ 1.74
SNRPN-202ENST00000390687 ARHGEF11O15085 1522 aa25.89■■□□□ 1.74
SNRPN-202ENST00000390687 CLASP1Q7Z460 1538 aa25.8■■□□□ 1.72
SNRPN-202ENST00000390687 ERICH3Q5RHP9 1530 aa25.77■■□□□ 1.72
SNRPN-202ENST00000390687 CYB5RLQ6IPT4 315 aa25.76■■□□□ 1.71
SNRPN-202ENST00000390687 FHAD1B1AJZ9 1412 aa25.76■■□□□ 1.71
SNRPN-202ENST00000390687 ADAMTS12P58397 1594 aa25.75■■□□□ 1.71
SNRPN-202ENST00000390687 GRIN2AQ12879 1464 aa25.74■■□□□ 1.71
SNRPN-202ENST00000390687 ARAP1Q96P48 1450 aa25.67■■□□□ 1.7
SNRPN-202ENST00000390687 NUP160Q12769 1436 aa25.65■■□□□ 1.7
SNRPN-202ENST00000390687 KIF27Q86VH2 1401 aa25.65■■□□□ 1.7
SNRPN-202ENST00000390687 IGF1RP08069 1367 aa25.65■■□□□ 1.7
SNRPN-202ENST00000390687 CEP170Q5SW79 1584 aa25.62■■□□□ 1.69
SNRPN-202ENST00000390687 ERCC6L2Q5T890 1561 aa25.48■■□□□ 1.67
SNRPN-202ENST00000390687 CUL7Q14999 1698 aa25.46■■□□□ 1.67
SNRPN-202ENST00000390687 CARMIL1Q5VZK9 1371 aa25.46■■□□□ 1.67
SNRPN-202ENST00000390687 JPH4Q96JJ6 628 aa25.46■■□□□ 1.67
SNRPN-202ENST00000390687 SHROOM2Q13796 1616 aa25.45■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms