RNA–Protein interactions for RNA: ENST00000314595.5

POLR2B-201, Transcript of RNA polymerase II subunit B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene POLR2B, Length 3,748 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2B-201ENST00000314595 NISCHQ9Y2I1 1504 aa10.77□□□□□ -0.69
POLR2B-201ENST00000314595 CCDC180Q9P1Z9 1646 aa10.13□□□□□ -0.79
POLR2B-201ENST00000314595 ABCC9O60706 1549 aa9.91□□□□□ -0.82
POLR2B-201ENST00000314595 RB1CC1Q8TDY2 1594 aa9.63□□□□□ -0.87
POLR2B-201ENST00000314595 DNAJC5BQ9UF47 199 aa9.6□□□□□ -0.87
POLR2B-201ENST00000314595 NACADO15069 1562 aa9.54□□□□□ -0.88
POLR2B-201ENST00000314595 SHROOM4Q9ULL8 1493 aa9.53□□□□□ -0.88
POLR2B-201ENST00000314595 MYO15BQ96JP2 1530 aa9.5□□□□□ -0.89
POLR2B-201ENST00000314595 UNC13AQ9UPW8 1703 aa9.46□□□□□ -0.9
POLR2B-201ENST00000314595 BICRAQ9NZM4 1560 aa9.37□□□□□ -0.91
POLR2B-201ENST00000314595 DNAJC5Q9H3Z4 198 aa9.28□□□□□ -0.92
POLR2B-201ENST00000314595 CC2D2AQ9P2K1 1620 aa9.18□□□□□ -0.94
POLR2B-201ENST00000314595 DCAF1Q9Y4B6 1507 aa9.16□□□□□ -0.94
POLR2B-201ENST00000314595 CECR2Q9BXF3 1484 aa9.12□□□□□ -0.95
POLR2B-201ENST00000314595 CUX2O14529 1486 aa9.11□□□□□ -0.95
POLR2B-201ENST00000314595 EIF4G1Q04637 1599 aaKnown RBP9.1□□□□□ -0.95
POLR2B-201ENST00000314595 PABPN1Q86U42 306 aaKnown RBP eCLIP8.95□□□□□ -0.98
POLR2B-201ENST00000314595 ZCCHC6Q5VYS8 1495 aaKnown RBP8.9□□□□□ -0.98
POLR2B-201ENST00000314595 THOC2Q8NI27 1593 aaKnown RBP8.77□□□□□ -1.01
POLR2B-201ENST00000314595 SCRIBQ14160 1630 aa8.75□□□□□ -1.01
POLR2B-201ENST00000314595 HMGXB3Q12766 1538 aa8.74□□□□□ -1.01
POLR2B-201ENST00000314595 NCAPD3P42695 1498 aa8.74□□□□□ -1.01
POLR2B-201ENST00000314595 LAMC3Q9Y6N6 1575 aa8.66□□□□□ -1.02
POLR2B-201ENST00000314595 PEG3Q9GZU2 1588 aa8.65□□□□□ -1.02
POLR2B-201ENST00000314595 SMARCA2P51531 1590 aa8.64□□□□□ -1.03
POLR2B-201ENST00000314595 ERCC6Q03468 1493 aa8.62□□□□□ -1.03
POLR2B-201ENST00000314595 WDR62O43379 1518 aa8.56□□□□□ -1.04
POLR2B-201ENST00000314595 ATAD2BQ9ULI0 1458 aa8.55□□□□□ -1.04
POLR2B-201ENST00000314595 KIF21AQ7Z4S6 1674 aa8.53□□□□□ -1.04
POLR2B-201ENST00000314595 BAZ1AQ9NRL2 1556 aaPredicted RBP8.52□□□□□ -1.05
POLR2B-201ENST00000314595 SMARCA4P51532 1647 aa8.51□□□□□ -1.05
POLR2B-201ENST00000314595 DCAF8L2P0C7V8 631 aa8.45□□□□□ -1.06
POLR2B-201ENST00000314595 MRC2Q9UBG0 1479 aa8.45□□□□□ -1.06
POLR2B-201ENST00000314595 PDS5BQ9NTI5 1447 aa8.45□□□□□ -1.06
POLR2B-201ENST00000314595 NESP48681 1621 aa8.43□□□□□ -1.06
POLR2B-201ENST00000314595 RIMBP3CA6NJZ7 1639 aa8.41□□□□□ -1.06
POLR2B-201ENST00000314595 RIMBP3BA6NNM3 1639 aa8.41□□□□□ -1.06
POLR2B-201ENST00000314595 RIMBP3Q9UFD9 1639 aa8.41□□□□□ -1.06
POLR2B-201ENST00000314595 BAZ1BQ9UIG0 1483 aaKnown RBP8.38□□□□□ -1.07
POLR2B-201ENST00000314595 PRDM2Q13029 1718 aa8.37□□□□□ -1.07
POLR2B-201ENST00000314595 CADPSQ9ULU8 1353 aa8.31□□□□□ -1.08
POLR2B-201ENST00000314595 ARHGEF11O15085 1522 aa8.3□□□□□ -1.08
POLR2B-201ENST00000314595 WDR97A6NE52 1622 aa8.29□□□□□ -1.08
POLR2B-201ENST00000314595 TRIM41Q8WV44 630 aa8.28□□□□□ -1.08
POLR2B-201ENST00000314595 CEP164Q9UPV0 1460 aa8.27□□□□□ -1.09
POLR2B-201ENST00000314595 RSF1Q96T23 1441 aaPredicted RBP8.26□□□□□ -1.09
POLR2B-201ENST00000314595 OSCARQ8IYS5 282 aa8.26□□□□□ -1.09
POLR2B-201ENST00000314595 CFTRP13569 1480 aa8.23□□□□□ -1.09
POLR2B-201ENST00000314595 IFT140Q96RY7 1462 aa8.2□□□□□ -1.1
POLR2B-201ENST00000314595 FANCD2Q9BXW9 1451 aa8.19□□□□□ -1.1
POLR2B-201ENST00000314595 URB2Q14146 1524 aaKnown RBP8.19□□□□□ -1.1
POLR2B-201ENST00000314595 ARAP1Q96P48 1450 aa8.18□□□□□ -1.1
POLR2B-201ENST00000314595 CLASP1Q7Z460 1538 aa8.17□□□□□ -1.1
POLR2B-201ENST00000314595 MROH2BQ7Z745 1585 aa8.17□□□□□ -1.1
POLR2B-201ENST00000314595 CHD1O14646 1710 aa8.16□□□□□ -1.1
POLR2B-201ENST00000314595 ABCC8Q09428 1581 aa8.15□□□□□ -1.1
POLR2B-201ENST00000314595 EIF4G3O43432 1585 aaKnown RBP8.15□□□□□ -1.11
POLR2B-201ENST00000314595 TARBP1Q13395 1621 aaKnown RBP8.13□□□□□ -1.11
POLR2B-201ENST00000314595 TOP2AP11388 1531 aaKnown RBP8.08□□□□□ -1.12
POLR2B-201ENST00000314595 DNMBPQ6XZF7 1577 aa8.08□□□□□ -1.12
POLR2B-201ENST00000314595 WIZO95785 1651 aa8.04□□□□□ -1.12
POLR2B-201ENST00000314595 TOPBP1Q92547 1522 aa8.04□□□□□ -1.12
POLR2B-201ENST00000314595 SYNJ1O43426 1573 aa8.04□□□□□ -1.12
POLR2B-201ENST00000314595 ZNF608Q9ULD9 1512 aaPredicted RBP8.03□□□□□ -1.12
POLR2B-201ENST00000314595 MAGI1Q96QZ7 1491 aaPredicted RBP8□□□□□ -1.13
POLR2B-201ENST00000314595 KIF13AQ9H1H9 1805 aa8□□□□□ -1.13
POLR2B-201ENST00000314595 SHROOM2Q13796 1616 aa7.99□□□□□ -1.13
POLR2B-201ENST00000314595 AEBP2Q6ZN18 517 aaPredicted RBP7.96□□□□□ -1.14
POLR2B-201ENST00000314595 ERCC6L2Q5T890 1561 aa7.93□□□□□ -1.14
POLR2B-201ENST00000314595 PBRM1Q86U86 1689 aa7.92□□□□□ -1.14
POLR2B-201ENST00000314595 SYNJ2O15056 1496 aa7.92□□□□□ -1.14
POLR2B-201ENST00000314595 MAPKBP1O60336 1514 aa7.91□□□□□ -1.14
POLR2B-201ENST00000314595 POLA1P09884 1462 aaPredicted RBP7.9□□□□□ -1.14
POLR2B-201ENST00000314595 ABCA5Q8WWZ7 1642 aa7.89□□□□□ -1.15
POLR2B-201ENST00000314595 GAPVD1Q14C86 1478 aa7.88□□□□□ -1.15
POLR2B-201ENST00000314595 CYB5RLQ6IPT4 315 aa7.88□□□□□ -1.15
POLR2B-201ENST00000314595 GRIN2BQ13224 1484 aa7.87□□□□□ -1.15
POLR2B-201ENST00000314595 SNAPC4Q5SXM2 1469 aa7.86□□□□□ -1.15
POLR2B-201ENST00000314595 NUP160Q12769 1436 aa7.84□□□□□ -1.15
POLR2B-201ENST00000314595 DIP2BQ9P265 1576 aa7.84□□□□□ -1.15
POLR2B-201ENST00000314595 AQRO60306 1485 aaKnown RBP eCLIP7.83□□□□□ -1.167e-7■■■■□ 20.3
POLR2B-201ENST00000314595 TRHP20396 242 aaPredicted RBP7.83□□□□□ -1.16
POLR2B-201ENST00000314595 ABCC10Q5T3U5 1492 aa7.83□□□□□ -1.16
POLR2B-201ENST00000314595 CEP170Q5SW79 1584 aa7.82□□□□□ -1.16
POLR2B-201ENST00000314595 CCDC88BA6NC98 1476 aa7.82□□□□□ -1.16
POLR2B-201ENST00000314595 ADAMTS12P58397 1594 aa7.81□□□□□ -1.16
POLR2B-201ENST00000314595 GLI2P10070 1586 aa7.81□□□□□ -1.16
POLR2B-201ENST00000314595 ABCA10Q8WWZ4 1543 aa7.8□□□□□ -1.16
POLR2B-201ENST00000314595 KDM6BO15054 1643 aa7.78□□□□□ -1.16
POLR2B-201ENST00000314595 ILDR1Q86SU0 546 aaPredicted RBP7.77□□□□□ -1.17
POLR2B-201ENST00000314595 PPRC1Q5VV67 1664 aaKnown RBP7.76□□□□□ -1.17
POLR2B-201ENST00000314595 GRIN2AQ12879 1464 aa7.76□□□□□ -1.17
POLR2B-201ENST00000314595 SOGA1O94964 1423 aa7.76□□□□□ -1.17
POLR2B-201ENST00000314595 FGD5Q6ZNL6 1462 aa7.75□□□□□ -1.17
POLR2B-201ENST00000314595 CUX1P39880 1505 aa7.74□□□□□ -1.17
POLR2B-201ENST00000314595 ERICH3Q5RHP9 1530 aa7.74□□□□□ -1.17
POLR2B-201ENST00000314595 HECW2Q9P2P5 1572 aa7.73□□□□□ -1.17
POLR2B-201ENST00000314595 RAD54L2Q9Y4B4 1467 aa7.72□□□□□ -1.17
POLR2B-201ENST00000314595 ADCY10Q96PN6 1610 aa7.72□□□□□ -1.17
POLR2B-201ENST00000314595 RUSC2Q8N2Y8 1516 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 103.4 ms