RNA–Protein interactions for RNA: ENST00000341322.4

BRWD1-202, Transcript of bromodomain and WD repeat domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene BRWD1, Length 2,495 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRWD1-202ENST00000341322 NISCHQ9Y2I1 1504 aa46.32■■■■■ 5.01
BRWD1-202ENST00000341322 CCDC180Q9P1Z9 1646 aa39.57■■■■□ 3.93
BRWD1-202ENST00000341322 SHROOM4Q9ULL8 1493 aa39.15■■■■□ 3.86
BRWD1-202ENST00000341322 ZCCHC6Q5VYS8 1495 aaKnown RBP39.06■■■■□ 3.84
BRWD1-202ENST00000341322 DCAF8L2P0C7V8 631 aa38.58■■■■□ 3.77
BRWD1-202ENST00000341322 SUPT5HO00267 1087 aaKnown RBP38.13■■■■□ 3.69
BRWD1-202ENST00000341322 DCAF1Q9Y4B6 1507 aa37.96■■■■□ 3.67
BRWD1-202ENST00000341322 ABCC9O60706 1549 aa37.18■■■■□ 3.54
BRWD1-202ENST00000341322 SCRIBQ14160 1630 aa37.06■■■■□ 3.52
BRWD1-202ENST00000341322 MYO15BQ96JP2 1530 aa37.05■■■■□ 3.52
BRWD1-202ENST00000341322 CHIC1Q5VXU3 224 aa36.83■■■■□ 3.49
BRWD1-202ENST00000341322 NACADO15069 1562 aa36.72■■■■□ 3.47
BRWD1-202ENST00000341322 RSF1Q96T23 1441 aaPredicted RBP36.47■■■■□ 3.43
BRWD1-202ENST00000341322 RB1CC1Q8TDY2 1594 aa36.23■■■■□ 3.39
BRWD1-202ENST00000341322 CECR2Q9BXF3 1484 aa36.23■■■■□ 3.39
BRWD1-202ENST00000341322 MROH2BQ7Z745 1585 aa36.02■■■■□ 3.36
BRWD1-202ENST00000341322 WIZO95785 1651 aa35.8■■■■□ 3.32
BRWD1-202ENST00000341322 LOC105371045A0A1W2PR82 267 aa35.76■■■■□ 3.32
BRWD1-202ENST00000341322 UNC13AQ9UPW8 1703 aa35.76■■■■□ 3.31
BRWD1-202ENST00000341322 BAZ1AQ9NRL2 1556 aaPredicted RBP35.58■■■■□ 3.29
BRWD1-202ENST00000341322 TRIM41Q8WV44 630 aa35.52■■■■□ 3.28
BRWD1-202ENST00000341322 PABPN1Q86U42 306 aaKnown RBP eCLIP35.49■■■■□ 3.27
BRWD1-202ENST00000341322 SMARCA4P51532 1647 aa35.38■■■■□ 3.25
BRWD1-202ENST00000341322 BICRAQ9NZM4 1560 aa35.35■■■■□ 3.25
BRWD1-202ENST00000341322 FAM9AQ8IZU1 332 aaPredicted RBP35.27■■■■□ 3.24
BRWD1-202ENST00000341322 TOP2AP11388 1531 aaKnown RBP35.17■■■■□ 3.22
BRWD1-202ENST00000341322 PCGF6Q9BYE7 350 aa35.12■■■■□ 3.21
BRWD1-202ENST00000341322 CCDC88BA6NC98 1476 aa35.06■■■■□ 3.2
BRWD1-202ENST00000341322 EIF4G1Q04637 1599 aaKnown RBP35.06■■■■□ 3.2
BRWD1-202ENST00000341322 EHMT2Q96KQ7 1210 aa35■■■■□ 3.19
BRWD1-202ENST00000341322 SMARCA2P51531 1590 aa35■■■■□ 3.19
BRWD1-202ENST00000341322 ABCC8Q09428 1581 aa34.81■■■■□ 3.16
BRWD1-202ENST00000341322 HRCP23327 699 aa34.71■■■■□ 3.15
BRWD1-202ENST00000341322 PEG3Q9GZU2 1588 aa34.71■■■■□ 3.15
BRWD1-202ENST00000341322 ATAD2BQ9ULI0 1458 aa34.61■■■■□ 3.13
BRWD1-202ENST00000341322 TRIM26Q12899 539 aaPredicted RBP34.53■■■■□ 3.12
BRWD1-202ENST00000341322 BAZ1BQ9UIG0 1483 aaKnown RBP34.46■■■■□ 3.11
BRWD1-202ENST00000341322 SOGA1O94964 1423 aa34.39■■■■□ 3.1
BRWD1-202ENST00000341322 RUSC2Q8N2Y8 1516 aa34.28■■■■□ 3.08
BRWD1-202ENST00000341322 WRNQ14191 1432 aaPredicted RBP eCLIP34.24■■■■□ 3.07
BRWD1-202ENST00000341322 PPARGC1BQ86YN6 1023 aaKnown RBP34.19■■■■□ 3.06
BRWD1-202ENST00000341322 SYNJ1O43426 1573 aa34.13■■■■□ 3.05
BRWD1-202ENST00000341322 CSRNP3Q8WYN3 585 aa34.11■■■■□ 3.05
BRWD1-202ENST00000341322 NCAPD3P42695 1498 aa34.02■■■■□ 3.04
BRWD1-202ENST00000341322 EEA1Q15075 1411 aa33.99■■■■□ 3.03
BRWD1-202ENST00000341322 HMGXB3Q12766 1538 aa33.93■■■■□ 3.02
BRWD1-202ENST00000341322 CEP162Q5TB80 1403 aa33.92■■■■□ 3.02
BRWD1-202ENST00000341322 UBTFP17480 764 aaKnown RBP33.91■■■■□ 3.02
BRWD1-202ENST00000341322 TNIKQ9UKE5 1360 aa33.9■■■■□ 3.02
BRWD1-202ENST00000341322 GOLGA3Q08378 1498 aa33.78■■■■□ 3
BRWD1-202ENST00000341322 TOP2BQ02880 1626 aa33.72■■■□□ 2.99
BRWD1-202ENST00000341322 TTBK1Q5TCY1 1321 aaPredicted RBP33.71■■■□□ 2.99
BRWD1-202ENST00000341322 CEP164Q9UPV0 1460 aa33.64■■■□□ 2.98
BRWD1-202ENST00000341322 KIF21BO75037 1637 aa33.6■■■□□ 2.97
BRWD1-202ENST00000341322 BIVM-ERCC5R4GMW8 1640 aa33.6■■■□□ 2.97
BRWD1-202ENST00000341322 CFTRP13569 1480 aa33.6■■■□□ 2.97
BRWD1-202ENST00000341322 CUX1P39880 1505 aa33.56■■■□□ 2.96
BRWD1-202ENST00000341322 RAPGEF2Q9Y4G8 1499 aa33.55■■■□□ 2.96
BRWD1-202ENST00000341322 CC2D2AQ9P2K1 1620 aa33.47■■■□□ 2.95
BRWD1-202ENST00000341322 RANGAP1P46060 587 aaPredicted RBP33.44■■■□□ 2.94
BRWD1-202ENST00000341322 ZEB1P37275 1124 aaPredicted RBP33.43■■■□□ 2.94
BRWD1-202ENST00000341322 CLIP1P30622 1438 aa33.4■■■□□ 2.94
BRWD1-202ENST00000341322 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP33.34■■■□□ 2.93
BRWD1-202ENST00000341322 CADPSQ9ULU8 1353 aa33.33■■■□□ 2.93
BRWD1-202ENST00000341322 PRXQ9BXM0 1461 aa33.26■■■□□ 2.92
BRWD1-202ENST00000341322 PRDM2Q13029 1718 aa33.26■■■□□ 2.91
BRWD1-202ENST00000341322 KIF27Q86VH2 1401 aa33.21■■■□□ 2.91
BRWD1-202ENST00000341322 VPS8Q8N3P4 1428 aa33.17■■■□□ 2.9
BRWD1-202ENST00000341322 ERICH3Q5RHP9 1530 aa33.15■■■□□ 2.9
BRWD1-202ENST00000341322 CCER1Q8TC90 406 aaPredicted RBP33.14■■■□□ 2.9
BRWD1-202ENST00000341322 CUX2O14529 1486 aa33.04■■■□□ 2.88
BRWD1-202ENST00000341322 FGD5Q6ZNL6 1462 aa33.02■■■□□ 2.88
BRWD1-202ENST00000341322 NESP48681 1621 aa33.01■■■□□ 2.88
BRWD1-202ENST00000341322 FANCD2Q9BXW9 1451 aa33.01■■■□□ 2.87
BRWD1-202ENST00000341322 IGF1RP08069 1367 aa32.97■■■□□ 2.87
BRWD1-202ENST00000341322 ARAP1Q96P48 1450 aa32.96■■■□□ 2.87
BRWD1-202ENST00000341322 APLP2Q06481 763 aa32.96■■■□□ 2.87
BRWD1-202ENST00000341322 DNAJC5BQ9UF47 199 aa32.93■■■□□ 2.86
BRWD1-202ENST00000341322 HNRNPUL2Q1KMD3 747 aaKnown RBP32.87■■■□□ 2.85
BRWD1-202ENST00000341322 RAD54L2Q9Y4B4 1467 aa32.8■■■□□ 2.84
BRWD1-202ENST00000341322 CARMIL1Q5VZK9 1371 aa32.79■■■□□ 2.84
BRWD1-202ENST00000341322 ARHGAP35Q9NRY4 1499 aa32.77■■■□□ 2.84
BRWD1-202ENST00000341322 KANK4Q5T7N3 995 aaPredicted RBP32.76■■■□□ 2.84
BRWD1-202ENST00000341322 TOPBP1Q92547 1522 aa32.75■■■□□ 2.83
BRWD1-202ENST00000341322 DNMBPQ6XZF7 1577 aa32.74■■■□□ 2.83
BRWD1-202ENST00000341322 POLA1P09884 1462 aaPredicted RBP32.7■■■□□ 2.83
BRWD1-202ENST00000341322 LAMC3Q9Y6N6 1575 aa32.61■■■□□ 2.81
BRWD1-202ENST00000341322 ABCA10Q8WWZ4 1543 aa32.6■■■□□ 2.81
BRWD1-202ENST00000341322 URB2Q14146 1524 aaKnown RBP32.6■■■□□ 2.81
BRWD1-202ENST00000341322 P3H3Q8IVL6 736 aa32.49■■■□□ 2.79
BRWD1-202ENST00000341322 TDRD9Q8NDG6 1382 aaKnown RBP32.43■■■□□ 2.78
BRWD1-202ENST00000341322 PDS5BQ9NTI5 1447 aa32.42■■■□□ 2.78
BRWD1-202ENST00000341322 KIF21AQ7Z4S6 1674 aa32.39■■■□□ 2.78
BRWD1-202ENST00000341322 WDR97A6NE52 1622 aa32.35■■■□□ 2.77
BRWD1-202ENST00000341322 RRBP1Q9P2E9 1410 aaKnown RBP32.32■■■□□ 2.76
BRWD1-202ENST00000341322 CUL7Q14999 1698 aa32.29■■■□□ 2.76
BRWD1-202ENST00000341322 FHOD3Q2V2M9 1422 aa32.28■■■□□ 2.76
BRWD1-202ENST00000341322 TIAM1Q13009 1591 aa32.27■■■□□ 2.76
BRWD1-202ENST00000341322 ATP1B4Q9UN42 357 aaPredicted RBP32.25■■■□□ 2.75
BRWD1-202ENST00000341322 ABCA5Q8WWZ7 1642 aa32.24■■■□□ 2.75
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms