RNA–Protein interactions for RNA: ENST00000465068.5

NUP58-207, Transcript of nucleoporin 58, humanhuman

TSL 4

Gene NUP58, Length 551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP58-207ENST00000465068 NISCHQ9Y2I1 1504 aa33.09■■■□□ 2.89
NUP58-207ENST00000465068 CCDC180Q9P1Z9 1646 aa29.21■■■□□ 2.27
NUP58-207ENST00000465068 ABCC9O60706 1549 aa28.46■■■□□ 2.15
NUP58-207ENST00000465068 ZCCHC6Q5VYS8 1495 aaKnown RBP27.6■■■□□ 2.01
NUP58-207ENST00000465068 NACADO15069 1562 aa27.48■■□□□ 1.99
NUP58-207ENST00000465068 MYO15BQ96JP2 1530 aa27.46■■□□□ 1.99
NUP58-207ENST00000465068 DCAF8L2P0C7V8 631 aa27.43■■□□□ 1.98
NUP58-207ENST00000465068 DCAF1Q9Y4B6 1507 aa27.41■■□□□ 1.98
NUP58-207ENST00000465068 RB1CC1Q8TDY2 1594 aa27.41■■□□□ 1.98
NUP58-207ENST00000465068 UNC13AQ9UPW8 1703 aa26.79■■□□□ 1.88
NUP58-207ENST00000465068 BICRAQ9NZM4 1560 aa26.72■■□□□ 1.87
NUP58-207ENST00000465068 PABPN1Q86U42 306 aaKnown RBP eCLIP26.68■■□□□ 1.86
NUP58-207ENST00000465068 SCRIBQ14160 1630 aa26.67■■□□□ 1.86
NUP58-207ENST00000465068 SHROOM4Q9ULL8 1493 aa26.37■■□□□ 1.81
NUP58-207ENST00000465068 DNAJC5BQ9UF47 199 aa26.16■■□□□ 1.78
NUP58-207ENST00000465068 EIF4G1Q04637 1599 aaKnown RBP25.92■■□□□ 1.74
NUP58-207ENST00000465068 CECR2Q9BXF3 1484 aa25.8■■□□□ 1.72
NUP58-207ENST00000465068 CC2D2AQ9P2K1 1620 aa25.75■■□□□ 1.71
NUP58-207ENST00000465068 SMARCA4P51532 1647 aa25.58■■□□□ 1.69
NUP58-207ENST00000465068 BAZ1AQ9NRL2 1556 aaPredicted RBP25.56■■□□□ 1.68
NUP58-207ENST00000465068 MROH2BQ7Z745 1585 aa25.52■■□□□ 1.68
NUP58-207ENST00000465068 ATAD2BQ9ULI0 1458 aa25.47■■□□□ 1.67
NUP58-207ENST00000465068 NCAPD3P42695 1498 aa25.46■■□□□ 1.67
NUP58-207ENST00000465068 PEG3Q9GZU2 1588 aa25.4■■□□□ 1.66
NUP58-207ENST00000465068 SMARCA2P51531 1590 aa25.35■■□□□ 1.65
NUP58-207ENST00000465068 RSF1Q96T23 1441 aaPredicted RBP25.32■■□□□ 1.64
NUP58-207ENST00000465068 HMGXB3Q12766 1538 aa25.26■■□□□ 1.63
NUP58-207ENST00000465068 WIZO95785 1651 aa25.18■■□□□ 1.62
NUP58-207ENST00000465068 BAZ1BQ9UIG0 1483 aaKnown RBP25.16■■□□□ 1.62
NUP58-207ENST00000465068 TOP2AP11388 1531 aaKnown RBP24.92■■□□□ 1.58
NUP58-207ENST00000465068 NESP48681 1621 aa24.74■■□□□ 1.55
NUP58-207ENST00000465068 CCDC88BA6NC98 1476 aa24.7■■□□□ 1.55
NUP58-207ENST00000465068 CADPSQ9ULU8 1353 aa24.68■■□□□ 1.54
NUP58-207ENST00000465068 SUPT5HO00267 1087 aaKnown RBP24.68■■□□□ 1.54
NUP58-207ENST00000465068 LAMC3Q9Y6N6 1575 aa24.63■■□□□ 1.53
NUP58-207ENST00000465068 CFTRP13569 1480 aa24.59■■□□□ 1.53
NUP58-207ENST00000465068 PDS5BQ9NTI5 1447 aa24.47■■□□□ 1.51
NUP58-207ENST00000465068 ERCC6Q03468 1493 aa24.41■■□□□ 1.5
NUP58-207ENST00000465068 FANCD2Q9BXW9 1451 aa24.35■■□□□ 1.49
NUP58-207ENST00000465068 KIF21AQ7Z4S6 1674 aa24.33■■□□□ 1.49
NUP58-207ENST00000465068 THOC2Q8NI27 1593 aaKnown RBP24.28■■□□□ 1.48
NUP58-207ENST00000465068 CEP164Q9UPV0 1460 aa24.25■■□□□ 1.47
NUP58-207ENST00000465068 MRC2Q9UBG0 1479 aa24.21■■□□□ 1.47
NUP58-207ENST00000465068 PRDM2Q13029 1718 aa24.21■■□□□ 1.47
NUP58-207ENST00000465068 CUX2O14529 1486 aa24.19■■□□□ 1.46
NUP58-207ENST00000465068 WDR62O43379 1518 aa24.15■■□□□ 1.46
NUP58-207ENST00000465068 URB2Q14146 1524 aaKnown RBP24.15■■□□□ 1.46
NUP58-207ENST00000465068 TOPBP1Q92547 1522 aa24■■□□□ 1.43
NUP58-207ENST00000465068 ABCC8Q09428 1581 aa23.95■■□□□ 1.43
NUP58-207ENST00000465068 DNMBPQ6XZF7 1577 aa23.94■■□□□ 1.42
NUP58-207ENST00000465068 CUX1P39880 1505 aa23.92■■□□□ 1.42
NUP58-207ENST00000465068 POLA1P09884 1462 aaPredicted RBP23.81■■□□□ 1.4
NUP58-207ENST00000465068 WRNQ14191 1432 aaPredicted RBP eCLIP23.78■■□□□ 1.4
NUP58-207ENST00000465068 IFT140Q96RY7 1462 aa23.78■■□□□ 1.4
NUP58-207ENST00000465068 FGD5Q6ZNL6 1462 aa23.75■■□□□ 1.39
NUP58-207ENST00000465068 TARBP1Q13395 1621 aaKnown RBP23.73■■□□□ 1.39
NUP58-207ENST00000465068 SYNJ1O43426 1573 aa23.73■■□□□ 1.39
NUP58-207ENST00000465068 RAD54L2Q9Y4B4 1467 aa23.72■■□□□ 1.39
NUP58-207ENST00000465068 ZNF608Q9ULD9 1512 aaPredicted RBP23.71■■□□□ 1.39
NUP58-207ENST00000465068 SOGA1O94964 1423 aa23.71■■□□□ 1.39
NUP58-207ENST00000465068 TOP2BQ02880 1626 aa23.7■■□□□ 1.39
NUP58-207ENST00000465068 BIVM-ERCC5R4GMW8 1640 aa23.68■■□□□ 1.38
NUP58-207ENST00000465068 AQRO60306 1485 aaKnown RBP eCLIP23.59■■□□□ 1.372e-6■■□□□ 12.6
NUP58-207ENST00000465068 ABCA10Q8WWZ4 1543 aa23.58■■□□□ 1.36
NUP58-207ENST00000465068 TDRD9Q8NDG6 1382 aaKnown RBP23.57■■□□□ 1.36
NUP58-207ENST00000465068 WDR97A6NE52 1622 aa23.52■■□□□ 1.36
NUP58-207ENST00000465068 EIF4G3O43432 1585 aaKnown RBP23.52■■□□□ 1.36
NUP58-207ENST00000465068 ABCA5Q8WWZ7 1642 aa23.43■■□□□ 1.34
NUP58-207ENST00000465068 GAPVD1Q14C86 1478 aa23.43■■□□□ 1.34
NUP58-207ENST00000465068 GRIN2BQ13224 1484 aa23.38■■□□□ 1.33
NUP58-207ENST00000465068 DNAJC5Q9H3Z4 198 aa23.33■■□□□ 1.33
NUP58-207ENST00000465068 SNAPC4Q5SXM2 1469 aa23.32■■□□□ 1.32
NUP58-207ENST00000465068 TRIM41Q8WV44 630 aa23.31■■□□□ 1.32
NUP58-207ENST00000465068 MAGI1Q96QZ7 1491 aaPredicted RBP23.3■■□□□ 1.32
NUP58-207ENST00000465068 CHIC1Q5VXU3 224 aa23.27■■□□□ 1.32
NUP58-207ENST00000465068 IGF1RP08069 1367 aa23.27■■□□□ 1.31
NUP58-207ENST00000465068 ERICH3Q5RHP9 1530 aa23.26■■□□□ 1.31
NUP58-207ENST00000465068 PBRM1Q86U86 1689 aa23.25■■□□□ 1.31
NUP58-207ENST00000465068 KIF27Q86VH2 1401 aa23.25■■□□□ 1.31
NUP58-207ENST00000465068 OSCARQ8IYS5 282 aa23.24■■□□□ 1.31
NUP58-207ENST00000465068 SYNJ2O15056 1496 aa23.22■■□□□ 1.31
NUP58-207ENST00000465068 RUSC2Q8N2Y8 1516 aa23.21■■□□□ 1.31
NUP58-207ENST00000465068 FHAD1B1AJZ9 1412 aa23.16■■□□□ 1.3
NUP58-207ENST00000465068 ADAMTS12P58397 1594 aa23.16■■□□□ 1.3
NUP58-207ENST00000465068 CHMP7Q8WUX9 453 aaPredicted RBP23.15■■□□□ 1.3
NUP58-207ENST00000465068 CHD1O14646 1710 aa23.14■■□□□ 1.3
NUP58-207ENST00000465068 FBLN2P98095 1184 aa23.14■■□□□ 1.29
NUP58-207ENST00000465068 GRIN2AQ12879 1464 aa23.1■■□□□ 1.29
NUP58-207ENST00000465068 CARMIL1Q5VZK9 1371 aa23.05■■□□□ 1.28
NUP58-207ENST00000465068 NUP160Q12769 1436 aa23.05■■□□□ 1.28
NUP58-207ENST00000465068 CLASP1Q7Z460 1538 aa23.03■■□□□ 1.28
NUP58-207ENST00000465068 CUL7Q14999 1698 aa23■■□□□ 1.27
NUP58-207ENST00000465068 CEP170Q5SW79 1584 aa22.98■■□□□ 1.27
NUP58-207ENST00000465068 PRXQ9BXM0 1461 aa22.95■■□□□ 1.26
NUP58-207ENST00000465068 CSRNP3Q8WYN3 585 aa22.93■■□□□ 1.26
NUP58-207ENST00000465068 EEA1Q15075 1411 aa22.92■■□□□ 1.26
NUP58-207ENST00000465068 RAPGEF2Q9Y4G8 1499 aa22.9■■□□□ 1.26
NUP58-207ENST00000465068 ARHGEF11O15085 1522 aa22.85■■□□□ 1.25
NUP58-207ENST00000465068 KIAA0586Q9BVV6 1533 aa22.83■■□□□ 1.25
NUP58-207ENST00000465068 RIMBP3CA6NJZ7 1639 aa22.8■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms