RNA–Protein interactions for RNA: ENST00000553597.5

SNRPN-206, Transcript of small nuclear ribonucleoprotein polypeptide N, humanhuman

TSL 3

Gene SNRPN, Length 849 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPN-206ENST00000553597 NISCHQ9Y2I1 1504 aa19.21■□□□□ 0.67
SNRPN-206ENST00000553597 AEBP2Q6ZN18 517 aaPredicted RBP17.29■□□□□ 0.36
SNRPN-206ENST00000553597 CCDC180Q9P1Z9 1646 aa17.09■□□□□ 0.33
SNRPN-206ENST00000553597 CHIC1Q5VXU3 224 aa16.87■□□□□ 0.29
SNRPN-206ENST00000553597 ABCC9O60706 1549 aa16.59■□□□□ 0.25
SNRPN-206ENST00000553597 ZCCHC6Q5VYS8 1495 aaKnown RBP16.06■□□□□ 0.16
SNRPN-206ENST00000553597 DCAF8L2P0C7V8 631 aa16.06■□□□□ 0.16
SNRPN-206ENST00000553597 RB1CC1Q8TDY2 1594 aa15.98■□□□□ 0.15
SNRPN-206ENST00000553597 NACADO15069 1562 aa15.95■□□□□ 0.14
SNRPN-206ENST00000553597 DCAF1Q9Y4B6 1507 aa15.83■□□□□ 0.12
SNRPN-206ENST00000553597 MYO15BQ96JP2 1530 aa15.79■□□□□ 0.12
SNRPN-206ENST00000553597 UNC13AQ9UPW8 1703 aa15.79■□□□□ 0.12
SNRPN-206ENST00000553597 SCRIBQ14160 1630 aa15.7■□□□□ 0.1
SNRPN-206ENST00000553597 BICRAQ9NZM4 1560 aa15.5■□□□□ 0.07
SNRPN-206ENST00000553597 PABPN1Q86U42 306 aaKnown RBP eCLIP15.48■□□□□ 0.07
SNRPN-206ENST00000553597 SHROOM4Q9ULL8 1493 aa15.43■□□□□ 0.06
SNRPN-206ENST00000553597 EIF4G1Q04637 1599 aaKnown RBP15.08■□□□□ 0
SNRPN-206ENST00000553597 CC2D2AQ9P2K1 1620 aa15.02□□□□□ -0.01
SNRPN-206ENST00000553597 CECR2Q9BXF3 1484 aa15□□□□□ -0.01
SNRPN-206ENST00000553597 DNAJC5BQ9UF47 199 aa14.98□□□□□ -0.01
SNRPN-206ENST00000553597 SMARCA4P51532 1647 aa14.95□□□□□ -0.02
SNRPN-206ENST00000553597 BAZ1AQ9NRL2 1556 aaPredicted RBP14.9□□□□□ -0.02
SNRPN-206ENST00000553597 MROH2BQ7Z745 1585 aa14.86□□□□□ -0.03
SNRPN-206ENST00000553597 SENP3Q9H4L4 574 aaPredicted RBP14.82□□□□□ -0.04
SNRPN-206ENST00000553597 WIZO95785 1651 aa14.79□□□□□ -0.04
SNRPN-206ENST00000553597 SMARCA2P51531 1590 aa14.76□□□□□ -0.05
SNRPN-206ENST00000553597 PHF23Q9BUL5 403 aaPredicted RBP14.75□□□□□ -0.05
SNRPN-206ENST00000553597 ATAD2BQ9ULI0 1458 aa14.74□□□□□ -0.05
SNRPN-206ENST00000553597 PEG3Q9GZU2 1588 aa14.71□□□□□ -0.05
SNRPN-206ENST00000553597 BAZ1BQ9UIG0 1483 aaKnown RBP14.69□□□□□ -0.06
SNRPN-206ENST00000553597 RSF1Q96T23 1441 aaPredicted RBP14.68□□□□□ -0.06
SNRPN-206ENST00000553597 HMGXB3Q12766 1538 aa14.67□□□□□ -0.06
SNRPN-206ENST00000553597 NCAPD3P42695 1498 aa14.65□□□□□ -0.06
SNRPN-206ENST00000553597 TOP2AP11388 1531 aaKnown RBP14.56□□□□□ -0.08
SNRPN-206ENST00000553597 SUPT5HO00267 1087 aaKnown RBP14.53□□□□□ -0.08
SNRPN-206ENST00000553597 NESP48681 1621 aa14.41□□□□□ -0.1
SNRPN-206ENST00000553597 CCDC88BA6NC98 1476 aa14.36□□□□□ -0.11
SNRPN-206ENST00000553597 KIF21AQ7Z4S6 1674 aa14.34□□□□□ -0.11
SNRPN-206ENST00000553597 PRDM2Q13029 1718 aa14.34□□□□□ -0.11
SNRPN-206ENST00000553597 LAMC3Q9Y6N6 1575 aa14.34□□□□□ -0.11
SNRPN-206ENST00000553597 ERCC6Q03468 1493 aa14.28□□□□□ -0.12
SNRPN-206ENST00000553597 CADPSQ9ULU8 1353 aa14.24□□□□□ -0.13
SNRPN-206ENST00000553597 CFTRP13569 1480 aa14.21□□□□□ -0.13
SNRPN-206ENST00000553597 FANCD2Q9BXW9 1451 aa14.17□□□□□ -0.14
SNRPN-206ENST00000553597 THOC2Q8NI27 1593 aaKnown RBP14.17□□□□□ -0.14
SNRPN-206ENST00000553597 PDS5BQ9NTI5 1447 aa14.16□□□□□ -0.14
SNRPN-206ENST00000553597 CEP164Q9UPV0 1460 aa14.15□□□□□ -0.14
SNRPN-206ENST00000553597 MRC2Q9UBG0 1479 aa14.08□□□□□ -0.16
SNRPN-206ENST00000553597 URB2Q14146 1524 aaKnown RBP14.04□□□□□ -0.16
SNRPN-206ENST00000553597 WDR62O43379 1518 aa14.03□□□□□ -0.16
SNRPN-206ENST00000553597 ABCC8Q09428 1581 aa14□□□□□ -0.17
SNRPN-206ENST00000553597 DNMBPQ6XZF7 1577 aa13.98□□□□□ -0.17
SNRPN-206ENST00000553597 CUX2O14529 1486 aa13.98□□□□□ -0.17
SNRPN-206ENST00000553597 TOPBP1Q92547 1522 aa13.97□□□□□ -0.17
SNRPN-206ENST00000553597 CUX1P39880 1505 aa13.95□□□□□ -0.18
SNRPN-206ENST00000553597 SYNJ1O43426 1573 aa13.92□□□□□ -0.18
SNRPN-206ENST00000553597 BIVM-ERCC5R4GMW8 1640 aa13.9□□□□□ -0.19
SNRPN-206ENST00000553597 FGD5Q6ZNL6 1462 aa13.87□□□□□ -0.19
SNRPN-206ENST00000553597 WRNQ14191 1432 aaPredicted RBP eCLIP13.87□□□□□ -0.19
SNRPN-206ENST00000553597 TOP2BQ02880 1626 aa13.86□□□□□ -0.19
SNRPN-206ENST00000553597 POLA1P09884 1462 aaPredicted RBP13.85□□□□□ -0.19
SNRPN-206ENST00000553597 WDR97A6NE52 1622 aa13.82□□□□□ -0.2
SNRPN-206ENST00000553597 TARBP1Q13395 1621 aaKnown RBP13.82□□□□□ -0.2
SNRPN-206ENST00000553597 RAD54L2Q9Y4B4 1467 aa13.82□□□□□ -0.2
SNRPN-206ENST00000553597 EIF4G3O43432 1585 aaKnown RBP13.8□□□□□ -0.2
SNRPN-206ENST00000553597 DNAJC5Q9H3Z4 198 aa13.79□□□□□ -0.2
SNRPN-206ENST00000553597 IFT140Q96RY7 1462 aa13.79□□□□□ -0.2
SNRPN-206ENST00000553597 ZNF608Q9ULD9 1512 aaPredicted RBP13.78□□□□□ -0.2
SNRPN-206ENST00000553597 SOGA1O94964 1423 aa13.76□□□□□ -0.21
SNRPN-206ENST00000553597 PBRM1Q86U86 1689 aa13.75□□□□□ -0.21
SNRPN-206ENST00000553597 AQRO60306 1485 aaKnown RBP eCLIP13.7□□□□□ -0.22
SNRPN-206ENST00000553597 PLPPR3Q6T4P5 718 aa13.7□□□□□ -0.22
SNRPN-206ENST00000553597 ABCA5Q8WWZ7 1642 aa13.69□□□□□ -0.22
SNRPN-206ENST00000553597 TDRD9Q8NDG6 1382 aaKnown RBP13.69□□□□□ -0.22
SNRPN-206ENST00000553597 ABCA10Q8WWZ4 1543 aa13.68□□□□□ -0.22
SNRPN-206ENST00000553597 FOXD1Q16676 465 aa13.67□□□□□ -0.22
SNRPN-206ENST00000553597 CHD1O14646 1710 aa13.67□□□□□ -0.22
SNRPN-206ENST00000553597 GAPVD1Q14C86 1478 aa13.63□□□□□ -0.23
SNRPN-206ENST00000553597 TRIM41Q8WV44 630 aa13.63□□□□□ -0.23
SNRPN-206ENST00000553597 SNAPC4Q5SXM2 1469 aa13.61□□□□□ -0.23
SNRPN-206ENST00000553597 GRIN2BQ13224 1484 aa13.59□□□□□ -0.23
SNRPN-206ENST00000553597 ADAMTS12P58397 1594 aa13.57□□□□□ -0.24
SNRPN-206ENST00000553597 RUSC2Q8N2Y8 1516 aa13.55□□□□□ -0.24
SNRPN-206ENST00000553597 KIF27Q86VH2 1401 aa13.54□□□□□ -0.24
SNRPN-206ENST00000553597 MAGI1Q96QZ7 1491 aaPredicted RBP13.54□□□□□ -0.24
SNRPN-206ENST00000553597 FBLN2P98095 1184 aa13.53□□□□□ -0.24
SNRPN-206ENST00000553597 ERICH3Q5RHP9 1530 aa13.53□□□□□ -0.24
SNRPN-206ENST00000553597 CUL7Q14999 1698 aa13.52□□□□□ -0.25
SNRPN-206ENST00000553597 SYNJ2O15056 1496 aa13.48□□□□□ -0.25
SNRPN-206ENST00000553597 FAM9AQ8IZU1 332 aaPredicted RBP13.47□□□□□ -0.25
SNRPN-206ENST00000553597 CHMP7Q8WUX9 453 aaPredicted RBP13.45□□□□□ -0.26
SNRPN-206ENST00000553597 GRIN2AQ12879 1464 aa13.44□□□□□ -0.26
SNRPN-206ENST00000553597 FHAD1B1AJZ9 1412 aa13.44□□□□□ -0.26
SNRPN-206ENST00000553597 CEP170Q5SW79 1584 aa13.43□□□□□ -0.26
SNRPN-206ENST00000553597 IGF1RP08069 1367 aa13.42□□□□□ -0.26
SNRPN-206ENST00000553597 CTTNBP2Q8WZ74 1663 aa13.38□□□□□ -0.27
SNRPN-206ENST00000553597 CARMIL1Q5VZK9 1371 aa13.38□□□□□ -0.27
SNRPN-206ENST00000553597 OSCARQ8IYS5 282 aa13.38□□□□□ -0.27
SNRPN-206ENST00000553597 CLASP1Q7Z460 1538 aa13.38□□□□□ -0.27
SNRPN-206ENST00000553597 EHMT2Q96KQ7 1210 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms