RNA–Protein interactions for RNA: ENST00000460326.5

NUP58-205, Transcript of nucleoporin 58, humanhuman

TSL 2

Gene NUP58, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP58-205ENST00000460326 NISCHQ9Y2I1 1504 aa34.42■■■■□ 3.1
NUP58-205ENST00000460326 CCDC180Q9P1Z9 1646 aa30.57■■■□□ 2.48
NUP58-205ENST00000460326 ABCC9O60706 1549 aa30■■■□□ 2.39
NUP58-205ENST00000460326 RB1CC1Q8TDY2 1594 aa28.77■■■□□ 2.2
NUP58-205ENST00000460326 DCAF8L2P0C7V8 631 aa28.77■■■□□ 2.2
NUP58-205ENST00000460326 NACADO15069 1562 aa28.73■■■□□ 2.19
NUP58-205ENST00000460326 ZCCHC6Q5VYS8 1495 aaKnown RBP28.65■■■□□ 2.18
NUP58-205ENST00000460326 MYO15BQ96JP2 1530 aa28.53■■■□□ 2.16
NUP58-205ENST00000460326 DCAF1Q9Y4B6 1507 aa28.42■■■□□ 2.14
NUP58-205ENST00000460326 UNC13AQ9UPW8 1703 aa28.29■■■□□ 2.12
NUP58-205ENST00000460326 PABPN1Q86U42 306 aaKnown RBP eCLIP28.07■■■□□ 2.08
NUP58-205ENST00000460326 BICRAQ9NZM4 1560 aa28.03■■■□□ 2.08
NUP58-205ENST00000460326 SCRIBQ14160 1630 aa27.94■■■□□ 2.06
NUP58-205ENST00000460326 DNAJC5BQ9UF47 199 aa27.69■■■□□ 2.02
NUP58-205ENST00000460326 SHROOM4Q9ULL8 1493 aa27.51■■■□□ 2
NUP58-205ENST00000460326 EIF4G1Q04637 1599 aaKnown RBP27.22■■□□□ 1.95
NUP58-205ENST00000460326 CC2D2AQ9P2K1 1620 aa27.14■■□□□ 1.94
NUP58-205ENST00000460326 CECR2Q9BXF3 1484 aa26.92■■□□□ 1.9
NUP58-205ENST00000460326 SMARCA4P51532 1647 aa26.72■■□□□ 1.87
NUP58-205ENST00000460326 BAZ1AQ9NRL2 1556 aaPredicted RBP26.63■■□□□ 1.85
NUP58-205ENST00000460326 MROH2BQ7Z745 1585 aa26.58■■□□□ 1.85
NUP58-205ENST00000460326 ATAD2BQ9ULI0 1458 aa26.57■■□□□ 1.84
NUP58-205ENST00000460326 NCAPD3P42695 1498 aa26.55■■□□□ 1.84
NUP58-205ENST00000460326 SMARCA2P51531 1590 aa26.47■■□□□ 1.83
NUP58-205ENST00000460326 PEG3Q9GZU2 1588 aa26.43■■□□□ 1.82
NUP58-205ENST00000460326 HMGXB3Q12766 1538 aa26.38■■□□□ 1.81
NUP58-205ENST00000460326 WIZO95785 1651 aa26.31■■□□□ 1.8
NUP58-205ENST00000460326 BAZ1BQ9UIG0 1483 aaKnown RBP26.3■■□□□ 1.8
NUP58-205ENST00000460326 RSF1Q96T23 1441 aaPredicted RBP26.23■■□□□ 1.79
NUP58-205ENST00000460326 NESP48681 1621 aa26■■□□□ 1.75
NUP58-205ENST00000460326 TOP2AP11388 1531 aaKnown RBP25.93■■□□□ 1.74
NUP58-205ENST00000460326 LAMC3Q9Y6N6 1575 aa25.82■■□□□ 1.72
NUP58-205ENST00000460326 CADPSQ9ULU8 1353 aa25.76■■□□□ 1.71
NUP58-205ENST00000460326 ERCC6Q03468 1493 aa25.76■■□□□ 1.71
NUP58-205ENST00000460326 KIF21AQ7Z4S6 1674 aa25.68■■□□□ 1.7
NUP58-205ENST00000460326 CCDC88BA6NC98 1476 aa25.68■■□□□ 1.7
NUP58-205ENST00000460326 PDS5BQ9NTI5 1447 aa25.62■■□□□ 1.69
NUP58-205ENST00000460326 CFTRP13569 1480 aa25.61■■□□□ 1.69
NUP58-205ENST00000460326 THOC2Q8NI27 1593 aaKnown RBP25.56■■□□□ 1.68
NUP58-205ENST00000460326 SUPT5HO00267 1087 aaKnown RBP25.55■■□□□ 1.68
NUP58-205ENST00000460326 CUX2O14529 1486 aa25.5■■□□□ 1.67
NUP58-205ENST00000460326 FANCD2Q9BXW9 1451 aa25.47■■□□□ 1.67
NUP58-205ENST00000460326 PRDM2Q13029 1718 aa25.45■■□□□ 1.66
NUP58-205ENST00000460326 CEP164Q9UPV0 1460 aa25.4■■□□□ 1.66
NUP58-205ENST00000460326 MRC2Q9UBG0 1479 aa25.39■■□□□ 1.65
NUP58-205ENST00000460326 WDR62O43379 1518 aa25.32■■□□□ 1.64
NUP58-205ENST00000460326 URB2Q14146 1524 aaKnown RBP25.27■■□□□ 1.64
NUP58-205ENST00000460326 TOPBP1Q92547 1522 aa25.08■■□□□ 1.61
NUP58-205ENST00000460326 DNMBPQ6XZF7 1577 aa25.02■■□□□ 1.6
NUP58-205ENST00000460326 ABCC8Q09428 1581 aa24.99■■□□□ 1.59
NUP58-205ENST00000460326 CUX1P39880 1505 aa24.91■■□□□ 1.58
NUP58-205ENST00000460326 IFT140Q96RY7 1462 aa24.87■■□□□ 1.57
NUP58-205ENST00000460326 ZNF608Q9ULD9 1512 aaPredicted RBP24.86■■□□□ 1.57
NUP58-205ENST00000460326 POLA1P09884 1462 aaPredicted RBP24.86■■□□□ 1.57
NUP58-205ENST00000460326 TARBP1Q13395 1621 aaKnown RBP24.84■■□□□ 1.57
NUP58-205ENST00000460326 DNAJC5Q9H3Z4 198 aa24.84■■□□□ 1.57
NUP58-205ENST00000460326 RAD54L2Q9Y4B4 1467 aa24.81■■□□□ 1.56
NUP58-205ENST00000460326 FGD5Q6ZNL6 1462 aa24.8■■□□□ 1.56
NUP58-205ENST00000460326 SOGA1O94964 1423 aa24.75■■□□□ 1.55
NUP58-205ENST00000460326 EIF4G3O43432 1585 aaKnown RBP24.71■■□□□ 1.55
NUP58-205ENST00000460326 AQRO60306 1485 aaKnown RBP eCLIP24.71■■□□□ 1.552e-6■■□□□ 12.6
NUP58-205ENST00000460326 SYNJ1O43426 1573 aa24.69■■□□□ 1.54
NUP58-205ENST00000460326 WRNQ14191 1432 aaPredicted RBP eCLIP24.68■■□□□ 1.54
NUP58-205ENST00000460326 BIVM-ERCC5R4GMW8 1640 aa24.67■■□□□ 1.54
NUP58-205ENST00000460326 TOP2BQ02880 1626 aa24.65■■□□□ 1.54
NUP58-205ENST00000460326 TDRD9Q8NDG6 1382 aaKnown RBP24.65■■□□□ 1.54
NUP58-205ENST00000460326 WDR97A6NE52 1622 aa24.63■■□□□ 1.53
NUP58-205ENST00000460326 ABCA10Q8WWZ4 1543 aa24.54■■□□□ 1.52
NUP58-205ENST00000460326 OSCARQ8IYS5 282 aa24.48■■□□□ 1.51
NUP58-205ENST00000460326 CHD1O14646 1710 aa24.47■■□□□ 1.51
NUP58-205ENST00000460326 ABCA5Q8WWZ7 1642 aa24.46■■□□□ 1.51
NUP58-205ENST00000460326 GAPVD1Q14C86 1478 aa24.45■■□□□ 1.51
NUP58-205ENST00000460326 PBRM1Q86U86 1689 aa24.45■■□□□ 1.5
NUP58-205ENST00000460326 SNAPC4Q5SXM2 1469 aa24.44■■□□□ 1.5
NUP58-205ENST00000460326 GRIN2BQ13224 1484 aa24.43■■□□□ 1.5
NUP58-205ENST00000460326 FBLN2P98095 1184 aa24.36■■□□□ 1.49
NUP58-205ENST00000460326 MAGI1Q96QZ7 1491 aaPredicted RBP24.35■■□□□ 1.49
NUP58-205ENST00000460326 SYNJ2O15056 1496 aa24.27■■□□□ 1.48
NUP58-205ENST00000460326 CHMP7Q8WUX9 453 aaPredicted RBP24.27■■□□□ 1.48
NUP58-205ENST00000460326 ERICH3Q5RHP9 1530 aa24.22■■□□□ 1.47
NUP58-205ENST00000460326 ADAMTS12P58397 1594 aa24.21■■□□□ 1.47
NUP58-205ENST00000460326 CLASP1Q7Z460 1538 aa24.15■■□□□ 1.46
NUP58-205ENST00000460326 RIMBP3CA6NJZ7 1639 aa24.15■■□□□ 1.46
NUP58-205ENST00000460326 RIMBP3BA6NNM3 1639 aa24.15■■□□□ 1.46
NUP58-205ENST00000460326 RIMBP3Q9UFD9 1639 aa24.15■■□□□ 1.46
NUP58-205ENST00000460326 FHAD1B1AJZ9 1412 aa24.15■■□□□ 1.46
NUP58-205ENST00000460326 GRIN2AQ12879 1464 aa24.13■■□□□ 1.45
NUP58-205ENST00000460326 KIF27Q86VH2 1401 aa24.13■■□□□ 1.45
NUP58-205ENST00000460326 IGF1RP08069 1367 aa24.13■■□□□ 1.45
NUP58-205ENST00000460326 ARHGEF11O15085 1522 aa24.1■■□□□ 1.45
NUP58-205ENST00000460326 TRIM41Q8WV44 630 aa24.08■■□□□ 1.45
NUP58-205ENST00000460326 RUSC2Q8N2Y8 1516 aa24.08■■□□□ 1.45
NUP58-205ENST00000460326 CEP170Q5SW79 1584 aa24.07■■□□□ 1.44
NUP58-205ENST00000460326 NUP160Q12769 1436 aa24.04■■□□□ 1.44
NUP58-205ENST00000460326 CUL7Q14999 1698 aa23.99■■□□□ 1.43
NUP58-205ENST00000460326 CARMIL1Q5VZK9 1371 aa23.94■■□□□ 1.42
NUP58-205ENST00000460326 ARAP1Q96P48 1450 aa23.94■■□□□ 1.42
NUP58-205ENST00000460326 CYB5RLQ6IPT4 315 aa23.91■■□□□ 1.42
NUP58-205ENST00000460326 ERCC6L2Q5T890 1561 aa23.91■■□□□ 1.42
NUP58-205ENST00000460326 SHROOM2Q13796 1616 aa23.88■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 746.1 ms