RNA–Protein interactions for RNA: ENST00000371520.5

ECHDC2-202, Transcript of enoyl-CoA hydratase domain containing 2, humanhuman

TSL 1 (best)

Gene ECHDC2, Length 1,606 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC2-202ENST00000371520 NISCHQ9Y2I1 1504 aa46.3■■■■■ 5
ECHDC2-202ENST00000371520 CCDC180Q9P1Z9 1646 aa40.69■■■■■ 4.1
ECHDC2-202ENST00000371520 ZCCHC6Q5VYS8 1495 aaKnown RBP38.85■■■■□ 3.81
ECHDC2-202ENST00000371520 ABCC9O60706 1549 aa38.62■■■■□ 3.77
ECHDC2-202ENST00000371520 DCAF1Q9Y4B6 1507 aa38.36■■■■□ 3.73
ECHDC2-202ENST00000371520 DCAF8L2P0C7V8 631 aa38.12■■■■□ 3.69
ECHDC2-202ENST00000371520 MYO15BQ96JP2 1530 aa38.07■■■■□ 3.68
ECHDC2-202ENST00000371520 NACADO15069 1562 aa37.91■■■■□ 3.66
ECHDC2-202ENST00000371520 RB1CC1Q8TDY2 1594 aa37.67■■■■□ 3.62
ECHDC2-202ENST00000371520 SHROOM4Q9ULL8 1493 aa37.31■■■■□ 3.56
ECHDC2-202ENST00000371520 SCRIBQ14160 1630 aa37.23■■■■□ 3.55
ECHDC2-202ENST00000371520 UNC13AQ9UPW8 1703 aa36.97■■■■□ 3.51
ECHDC2-202ENST00000371520 BICRAQ9NZM4 1560 aa36.55■■■■□ 3.44
ECHDC2-202ENST00000371520 PABPN1Q86U42 306 aaKnown RBP eCLIP36.25■■■■□ 3.397e-7■□□□□ 10.8
ECHDC2-202ENST00000371520 CECR2Q9BXF3 1484 aa35.95■■■■□ 3.34
ECHDC2-202ENST00000371520 BAZ1AQ9NRL2 1556 aaPredicted RBP35.81■■■■□ 3.32
ECHDC2-202ENST00000371520 MROH2BQ7Z745 1585 aa35.73■■■■□ 3.31
ECHDC2-202ENST00000371520 SMARCA4P51532 1647 aa35.72■■■■□ 3.31
ECHDC2-202ENST00000371520 RSF1Q96T23 1441 aaPredicted RBP35.71■■■■□ 3.31
ECHDC2-202ENST00000371520 SUPT5HO00267 1087 aaKnown RBP35.67■■■■□ 3.3
ECHDC2-202ENST00000371520 EIF4G1Q04637 1599 aaKnown RBP35.46■■■■□ 3.27
ECHDC2-202ENST00000371520 WIZO95785 1651 aa35.44■■■■□ 3.26
ECHDC2-202ENST00000371520 PEG3Q9GZU2 1588 aa35.33■■■■□ 3.25
ECHDC2-202ENST00000371520 SMARCA2P51531 1590 aa35.19■■■■□ 3.22
ECHDC2-202ENST00000371520 ATAD2BQ9ULI0 1458 aa35.17■■■■□ 3.22
ECHDC2-202ENST00000371520 TOP2AP11388 1531 aaKnown RBP35.1■■■■□ 3.21
ECHDC2-202ENST00000371520 CC2D2AQ9P2K1 1620 aa35.02■■■■□ 3.2
ECHDC2-202ENST00000371520 BAZ1BQ9UIG0 1483 aaKnown RBP34.95■■■■□ 3.19
ECHDC2-202ENST00000371520 NCAPD3P42695 1498 aa34.94■■■■□ 3.18
ECHDC2-202ENST00000371520 HMGXB3Q12766 1538 aa34.93■■■■□ 3.18
ECHDC2-202ENST00000371520 CCDC88BA6NC98 1476 aa34.65■■■■□ 3.14
ECHDC2-202ENST00000371520 DNAJC5BQ9UF47 199 aa34.45■■■■□ 3.11
ECHDC2-202ENST00000371520 CFTRP13569 1480 aa34.06■■■■□ 3.04
ECHDC2-202ENST00000371520 PRDM2Q13029 1718 aa34.02■■■■□ 3.04
ECHDC2-202ENST00000371520 CHIC1Q5VXU3 224 aa33.99■■■■□ 3.03
ECHDC2-202ENST00000371520 CADPSQ9ULU8 1353 aa33.98■■■■□ 3.03
ECHDC2-202ENST00000371520 LAMC3Q9Y6N6 1575 aa33.88■■■■□ 3.01
ECHDC2-202ENST00000371520 ABCC8Q09428 1581 aa33.81■■■■□ 3
ECHDC2-202ENST00000371520 NESP48681 1621 aa33.8■■■■□ 3
ECHDC2-202ENST00000371520 WRNQ14191 1432 aaPredicted RBP eCLIP33.63■■■□□ 2.97
ECHDC2-202ENST00000371520 FANCD2Q9BXW9 1451 aa33.62■■■□□ 2.97
ECHDC2-202ENST00000371520 TRIM41Q8WV44 630 aa33.61■■■□□ 2.97
ECHDC2-202ENST00000371520 SYNJ1O43426 1573 aa33.56■■■□□ 2.96
ECHDC2-202ENST00000371520 PDS5BQ9NTI5 1447 aa33.54■■■□□ 2.96
ECHDC2-202ENST00000371520 KIF21AQ7Z4S6 1674 aa33.5■■■□□ 2.95
ECHDC2-202ENST00000371520 BIVM-ERCC5R4GMW8 1640 aa33.5■■■□□ 2.95
ECHDC2-202ENST00000371520 TOP2BQ02880 1626 aa33.48■■■□□ 2.95
ECHDC2-202ENST00000371520 CEP164Q9UPV0 1460 aa33.48■■■□□ 2.95
ECHDC2-202ENST00000371520 CUX1P39880 1505 aa33.45■■■□□ 2.95
ECHDC2-202ENST00000371520 DNMBPQ6XZF7 1577 aa33.31■■■□□ 2.92
ECHDC2-202ENST00000371520 URB2Q14146 1524 aaKnown RBP33.24■■■□□ 2.91
ECHDC2-202ENST00000371520 TOPBP1Q92547 1522 aa33.23■■■□□ 2.91
ECHDC2-202ENST00000371520 ERCC6Q03468 1493 aa33.17■■■□□ 2.9
ECHDC2-202ENST00000371520 MRC2Q9UBG0 1479 aa33.17■■■□□ 2.9
ECHDC2-202ENST00000371520 FGD5Q6ZNL6 1462 aa33.13■■■□□ 2.89
ECHDC2-202ENST00000371520 THOC2Q8NI27 1593 aaKnown RBP33.07■■■□□ 2.88
ECHDC2-202ENST00000371520 WDR62O43379 1518 aa33.06■■■□□ 2.88
ECHDC2-202ENST00000371520 SOGA1O94964 1423 aa33.04■■■□□ 2.88
ECHDC2-202ENST00000371520 POLA1P09884 1462 aaPredicted RBP33.04■■■□□ 2.88
ECHDC2-202ENST00000371520 EEA1Q15075 1411 aa32.98■■■□□ 2.87
ECHDC2-202ENST00000371520 RUSC2Q8N2Y8 1516 aa32.94■■■□□ 2.86
ECHDC2-202ENST00000371520 FAM9AQ8IZU1 332 aaPredicted RBP32.91■■■□□ 2.86
ECHDC2-202ENST00000371520 WDR97A6NE52 1622 aa32.89■■■□□ 2.86
ECHDC2-202ENST00000371520 RAD54L2Q9Y4B4 1467 aa32.87■■■□□ 2.85
ECHDC2-202ENST00000371520 ABCA10Q8WWZ4 1543 aa32.86■■■□□ 2.85
ECHDC2-202ENST00000371520 TARBP1Q13395 1621 aaKnown RBP32.82■■■□□ 2.85
ECHDC2-202ENST00000371520 KIF27Q86VH2 1401 aa32.82■■■□□ 2.84
ECHDC2-202ENST00000371520 CUX2O14529 1486 aa32.81■■■□□ 2.84
ECHDC2-202ENST00000371520 CSRNP3Q8WYN3 585 aa32.73■■■□□ 2.83
ECHDC2-202ENST00000371520 IFT140Q96RY7 1462 aa32.7■■■□□ 2.82
ECHDC2-202ENST00000371520 ABCA5Q8WWZ7 1642 aa32.68■■■□□ 2.82
ECHDC2-202ENST00000371520 KIF21BO75037 1637 aa32.62■■■□□ 2.81
ECHDC2-202ENST00000371520 LOC105371045A0A1W2PR82 267 aa32.61■■■□□ 2.81
ECHDC2-202ENST00000371520 TDRD9Q8NDG6 1382 aaKnown RBP32.55■■■□□ 2.8
ECHDC2-202ENST00000371520 GAPVD1Q14C86 1478 aa32.54■■■□□ 2.8
ECHDC2-202ENST00000371520 IGF1RP08069 1367 aa32.53■■■□□ 2.8
ECHDC2-202ENST00000371520 PRXQ9BXM0 1461 aa32.52■■■□□ 2.8
ECHDC2-202ENST00000371520 PBRM1Q86U86 1689 aa32.5■■■□□ 2.79
ECHDC2-202ENST00000371520 ERICH3Q5RHP9 1530 aa32.49■■■□□ 2.79
ECHDC2-202ENST00000371520 ZNF608Q9ULD9 1512 aaPredicted RBP32.49■■■□□ 2.79
ECHDC2-202ENST00000371520 GOLGA3Q08378 1498 aa32.49■■■□□ 2.79
ECHDC2-202ENST00000371520 EIF4G3O43432 1585 aaKnown RBP32.46■■■□□ 2.79
ECHDC2-202ENST00000371520 CUL7Q14999 1698 aa32.46■■■□□ 2.79
ECHDC2-202ENST00000371520 AQRO60306 1485 aaKnown RBP eCLIP32.43■■■□□ 2.783e-6■■■□□ 18.1
ECHDC2-202ENST00000371520 RAPGEF2Q9Y4G8 1499 aa32.43■■■□□ 2.78
ECHDC2-202ENST00000371520 EHMT2Q96KQ7 1210 aa32.41■■■□□ 2.78
ECHDC2-202ENST00000371520 GRIN2BQ13224 1484 aa32.37■■■□□ 2.77
ECHDC2-202ENST00000371520 CARMIL1Q5VZK9 1371 aa32.36■■■□□ 2.77
ECHDC2-202ENST00000371520 TNIKQ9UKE5 1360 aa32.27■■■□□ 2.76
ECHDC2-202ENST00000371520 ADAMTS12P58397 1594 aa32.27■■■□□ 2.76
ECHDC2-202ENST00000371520 UBTFP17480 764 aaKnown RBP32.22■■■□□ 2.75
ECHDC2-202ENST00000371520 FHAD1B1AJZ9 1412 aa32.19■■■□□ 2.74
ECHDC2-202ENST00000371520 SNAPC4Q5SXM2 1469 aa32.18■■■□□ 2.74
ECHDC2-202ENST00000371520 MAGI1Q96QZ7 1491 aaPredicted RBP32.17■■■□□ 2.74
ECHDC2-202ENST00000371520 CEP162Q5TB80 1403 aa32.08■■■□□ 2.73
ECHDC2-202ENST00000371520 CTTNBP2Q8WZ74 1663 aa32.07■■■□□ 2.72
ECHDC2-202ENST00000371520 SYNJ2O15056 1496 aa32.02■■■□□ 2.72
ECHDC2-202ENST00000371520 GRIN2AQ12879 1464 aa31.98■■■□□ 2.71
ECHDC2-202ENST00000371520 CLIP1P30622 1438 aa31.92■■■□□ 2.7
ECHDC2-202ENST00000371520 CHD1O14646 1710 aa31.86■■■□□ 2.69
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms