RNA–Protein interactions for RNA: ENST00000514396.5

ABCA11P-204, Transcript of ATP binding cassette subfamily A member 11, pseudogene, humanhuman

TSL 1 (best)

Gene ABCA11P, Length 1,423 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA11P-204ENST00000514396 AEBP2Q6ZN18 517 aaPredicted RBP17.94■□□□□ 0.46
ABCA11P-204ENST00000514396 CHIC1Q5VXU3 224 aa17.54■□□□□ 0.4
ABCA11P-204ENST00000514396 NISCHQ9Y2I1 1504 aa15.77■□□□□ 0.11
ABCA11P-204ENST00000514396 PHF23Q9BUL5 403 aaPredicted RBP15.52■□□□□ 0.08
ABCA11P-204ENST00000514396 SENP3Q9H4L4 574 aaPredicted RBP15.38■□□□□ 0.05
ABCA11P-204ENST00000514396 PLPPR3Q6T4P5 718 aa14.73□□□□□ -0.05
ABCA11P-204ENST00000514396 FOXD1Q16676 465 aa14.39□□□□□ -0.11
ABCA11P-204ENST00000514396 EHMT2Q96KQ7 1210 aa14.38□□□□□ -0.11
ABCA11P-204ENST00000514396 CCDC180Q9P1Z9 1646 aa14.21□□□□□ -0.13
ABCA11P-204ENST00000514396 ABCC9O60706 1549 aa14.13□□□□□ -0.15
ABCA11P-204ENST00000514396 POTEDQ86YR6 584 aa14.01□□□□□ -0.17
ABCA11P-204ENST00000514396 KCNA4P22459 653 aa13.98□□□□□ -0.17
ABCA11P-204ENST00000514396 ADRA2BP18089 450 aa13.74□□□□□ -0.21
ABCA11P-204ENST00000514396 CSRNP3Q8WYN3 585 aa13.65□□□□□ -0.22
ABCA11P-204ENST00000514396 MSH5O43196 834 aa13.63□□□□□ -0.23
ABCA11P-204ENST00000514396 SLC4A1APQ9BWU0 796 aaKnown RBP13.53□□□□□ -0.24
ABCA11P-204ENST00000514396 SLC24A1O60721 1099 aa13.51□□□□□ -0.25
ABCA11P-204ENST00000514396 RB1CC1Q8TDY2 1594 aa13.46□□□□□ -0.26
ABCA11P-204ENST00000514396 PIAS4Q8N2W9 510 aaPredicted RBP13.39□□□□□ -0.27
ABCA11P-204ENST00000514396 PPP6R1Q9UPN7 881 aa13.37□□□□□ -0.27
ABCA11P-204ENST00000514396 NACADO15069 1562 aa13.34□□□□□ -0.27
ABCA11P-204ENST00000514396 UNC13AQ9UPW8 1703 aa13.3□□□□□ -0.28
ABCA11P-204ENST00000514396 DCAF8L2P0C7V8 631 aa13.27□□□□□ -0.29
ABCA11P-204ENST00000514396 MYO15BQ96JP2 1530 aa13.11□□□□□ -0.31
ABCA11P-204ENST00000514396 ZCCHC6Q5VYS8 1495 aaKnown RBP13.11□□□□□ -0.31
ABCA11P-204ENST00000514396 PPP4R3CPQ6ZMV5 832 aa13.11□□□□□ -0.31
ABCA11P-204ENST00000514396 DNAJC5BQ9UF47 199 aa13.11□□□□□ -0.31
ABCA11P-204ENST00000514396 PABPN1Q86U42 306 aaKnown RBP eCLIP13.1□□□□□ -0.31
ABCA11P-204ENST00000514396 NCBP3Q53F19 620 aaKnown RBP13.09□□□□□ -0.31
ABCA11P-204ENST00000514396 BICRAQ9NZM4 1560 aa13.07□□□□□ -0.32
ABCA11P-204ENST00000514396 AMER1Q5JTC6 1135 aaPredicted RBP13.05□□□□□ -0.32
ABCA11P-204ENST00000514396 RTN4Q9NQC3 1192 aaKnown RBP13.05□□□□□ -0.32
ABCA11P-204ENST00000514396 SCRIBQ14160 1630 aa12.99□□□□□ -0.33
ABCA11P-204ENST00000514396 DCAF1Q9Y4B6 1507 aa12.99□□□□□ -0.33
ABCA11P-204ENST00000514396 ZBTB22O15209 634 aa12.87□□□□□ -0.35
ABCA11P-204ENST00000514396 NPM3O75607 178 aaKnown RBP12.87□□□□□ -0.35
ABCA11P-204ENST00000514396 SHROOM4Q9ULL8 1493 aa12.83□□□□□ -0.36
ABCA11P-204ENST00000514396 CC2D2AQ9P2K1 1620 aa12.78□□□□□ -0.36
ABCA11P-204ENST00000514396 EIF4G1Q04637 1599 aaKnown RBP12.75□□□□□ -0.37
ABCA11P-204ENST00000514396 CECR2Q9BXF3 1484 aa12.68□□□□□ -0.38
ABCA11P-204ENST00000514396 FOXD4L1Q9NU39 408 aa12.57□□□□□ -0.4
ABCA11P-204ENST00000514396 CNKSR2Q8WXI2 1034 aa12.5□□□□□ -0.41
ABCA11P-204ENST00000514396 SMARCA4P51532 1647 aa12.36□□□□□ -0.43
ABCA11P-204ENST00000514396 FKBP8Q14318 412 aa12.33□□□□□ -0.44
ABCA11P-204ENST00000514396 SCAF1Q9H7N4 1312 aaKnown RBP12.31□□□□□ -0.44
ABCA11P-204ENST00000514396 ATAD2BQ9ULI0 1458 aa12.27□□□□□ -0.44
ABCA11P-204ENST00000514396 SMARCA2P51531 1590 aa12.27□□□□□ -0.45
ABCA11P-204ENST00000514396 NCAPD3P42695 1498 aa12.26□□□□□ -0.45
ABCA11P-204ENST00000514396 BAZ1AQ9NRL2 1556 aaPredicted RBP12.26□□□□□ -0.45
ABCA11P-204ENST00000514396 HMGXB3Q12766 1538 aa12.25□□□□□ -0.45
ABCA11P-204ENST00000514396 BAZ1BQ9UIG0 1483 aaKnown RBP12.2□□□□□ -0.46
ABCA11P-204ENST00000514396 ERCC6Q03468 1493 aa12.19□□□□□ -0.46
ABCA11P-204ENST00000514396 MROH2BQ7Z745 1585 aa12.18□□□□□ -0.46
ABCA11P-204ENST00000514396 PEG3Q9GZU2 1588 aa12.18□□□□□ -0.46
ABCA11P-204ENST00000514396 NESP48681 1621 aa12.16□□□□□ -0.46
ABCA11P-204ENST00000514396 MAPK8IP2Q13387 824 aaPredicted RBP12.15□□□□□ -0.46
ABCA11P-204ENST00000514396 DMRT2Q9Y5R5 561 aa12.11□□□□□ -0.47
ABCA11P-204ENST00000514396 CUX2O14529 1486 aa12.1□□□□□ -0.47
ABCA11P-204ENST00000514396 WIZO95785 1651 aa12.1□□□□□ -0.47
ABCA11P-204ENST00000514396 KIF21AQ7Z4S6 1674 aa12.1□□□□□ -0.47
ABCA11P-204ENST00000514396 THOC2Q8NI27 1593 aaKnown RBP12.07□□□□□ -0.48
ABCA11P-204ENST00000514396 LAMC3Q9Y6N6 1575 aa12.06□□□□□ -0.48
ABCA11P-204ENST00000514396 ATXN8OSP0DMR3 200 aa12.02□□□□□ -0.49
ABCA11P-204ENST00000514396 RNF216Q9NWF9 866 aaPredicted RBP12□□□□□ -0.49
ABCA11P-204ENST00000514396 CACNB1Q02641 598 aaPredicted RBP11.99□□□□□ -0.49
ABCA11P-204ENST00000514396 PLCB2Q00722 1185 aa11.98□□□□□ -0.49
ABCA11P-204ENST00000514396 DNAJC5Q9H3Z4 198 aa11.94□□□□□ -0.5
ABCA11P-204ENST00000514396 PDS5BQ9NTI5 1447 aa11.92□□□□□ -0.5
ABCA11P-204ENST00000514396 TOP2AP11388 1531 aaKnown RBP11.91□□□□□ -0.5
ABCA11P-204ENST00000514396 BCANQ96GW7 911 aa11.91□□□□□ -0.5
ABCA11P-204ENST00000514396 RSF1Q96T23 1441 aaPredicted RBP11.9□□□□□ -0.51
ABCA11P-204ENST00000514396 CADPSQ9ULU8 1353 aa11.89□□□□□ -0.51
ABCA11P-204ENST00000514396 PRDM2Q13029 1718 aa11.88□□□□□ -0.51
ABCA11P-204ENST00000514396 MYCNP04198 464 aaPredicted RBP11.87□□□□□ -0.51
ABCA11P-204ENST00000514396 SLC4A2P04920 1241 aa11.87□□□□□ -0.51
ABCA11P-204ENST00000514396 PRKCSHP14314 528 aaPredicted RBP11.87□□□□□ -0.51
ABCA11P-204ENST00000514396 MRC2Q9UBG0 1479 aa11.87□□□□□ -0.51
ABCA11P-204ENST00000514396 HAP1P54257 671 aaPredicted RBP11.86□□□□□ -0.51
ABCA11P-204ENST00000514396 WDR62O43379 1518 aa11.86□□□□□ -0.51
ABCA11P-204ENST00000514396 CEP164Q9UPV0 1460 aa11.85□□□□□ -0.51
ABCA11P-204ENST00000514396 FANCD2Q9BXW9 1451 aa11.83□□□□□ -0.52
ABCA11P-204ENST00000514396 CFTRP13569 1480 aa11.79□□□□□ -0.52
ABCA11P-204ENST00000514396 TAOK2Q9UL54 1235 aa11.79□□□□□ -0.52
ABCA11P-204ENST00000514396 DCAF8L1A6NGE4 600 aa11.76□□□□□ -0.53
ABCA11P-204ENST00000514396 URB2Q14146 1524 aaKnown RBP11.74□□□□□ -0.53
ABCA11P-204ENST00000514396 CCDC88BA6NC98 1476 aa11.73□□□□□ -0.53
ABCA11P-204ENST00000514396 VSIG10Q8N0Z9 540 aa11.66□□□□□ -0.54
ABCA11P-204ENST00000514396 HOXD11P31277 338 aaPredicted RBP11.65□□□□□ -0.54
ABCA11P-204ENST00000514396 TOPBP1Q92547 1522 aa11.62□□□□□ -0.55
ABCA11P-204ENST00000514396 TPRNQ4KMQ1 711 aa11.61□□□□□ -0.55
ABCA11P-204ENST00000514396 DNMBPQ6XZF7 1577 aa11.6□□□□□ -0.55
ABCA11P-204ENST00000514396 EIF4G3O43432 1585 aaKnown RBP11.6□□□□□ -0.55
ABCA11P-204ENST00000514396 FBXO3Q9UK99 471 aa11.6□□□□□ -0.55
ABCA11P-204ENST00000514396 ZNF608Q9ULD9 1512 aaPredicted RBP11.59□□□□□ -0.55
ABCA11P-204ENST00000514396 IFT140Q96RY7 1462 aa11.58□□□□□ -0.56
ABCA11P-204ENST00000514396 RNF39Q9H2S5 420 aa11.57□□□□□ -0.56
ABCA11P-204ENST00000514396 TRIM41Q8WV44 630 aa11.55□□□□□ -0.56
ABCA11P-204ENST00000514396 CHD1O14646 1710 aa11.55□□□□□ -0.56
ABCA11P-204ENST00000514396 TARBP1Q13395 1621 aaKnown RBP11.53□□□□□ -0.56
ABCA11P-204ENST00000514396 ABCC8Q09428 1581 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms