RNA–Protein interactions for RNA: ENST00000554227.6

SNRPN-207, Transcript of small nuclear ribonucleoprotein polypeptide N, humanhuman

TSL 5 BASIC

Gene SNRPN, Length 1,763 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPN-207ENST00000554227 NISCHQ9Y2I1 1504 aa43.91■■■■■ 4.62
SNRPN-207ENST00000554227 CCDC180Q9P1Z9 1646 aa38.35■■■■□ 3.73
SNRPN-207ENST00000554227 ZCCHC6Q5VYS8 1495 aaKnown RBP36.81■■■■□ 3.48
SNRPN-207ENST00000554227 ABCC9O60706 1549 aa36.62■■■■□ 3.45
SNRPN-207ENST00000554227 DCAF8L2P0C7V8 631 aa36.48■■■■□ 3.43
SNRPN-207ENST00000554227 DCAF1Q9Y4B6 1507 aa36.21■■■■□ 3.39
SNRPN-207ENST00000554227 MYO15BQ96JP2 1530 aa35.85■■■■□ 3.33
SNRPN-207ENST00000554227 SHROOM4Q9ULL8 1493 aa35.78■■■■□ 3.32
SNRPN-207ENST00000554227 NACADO15069 1562 aa35.77■■■■□ 3.32
SNRPN-207ENST00000554227 RB1CC1Q8TDY2 1594 aa35.55■■■■□ 3.28
SNRPN-207ENST00000554227 SCRIBQ14160 1630 aa35.35■■■■□ 3.25
SNRPN-207ENST00000554227 UNC13AQ9UPW8 1703 aa34.95■■■■□ 3.19
SNRPN-207ENST00000554227 BICRAQ9NZM4 1560 aa34.56■■■■□ 3.12
SNRPN-207ENST00000554227 PABPN1Q86U42 306 aaKnown RBP eCLIP34.53■■■■□ 3.12
SNRPN-207ENST00000554227 SUPT5HO00267 1087 aaKnown RBP34.28■■■■□ 3.08
SNRPN-207ENST00000554227 CECR2Q9BXF3 1484 aa34.22■■■■□ 3.07
SNRPN-207ENST00000554227 RSF1Q96T23 1441 aaPredicted RBP33.99■■■■□ 3.03
SNRPN-207ENST00000554227 MROH2BQ7Z745 1585 aa33.96■■■■□ 3.03
SNRPN-207ENST00000554227 BAZ1AQ9NRL2 1556 aaPredicted RBP33.88■■■■□ 3.01
SNRPN-207ENST00000554227 SMARCA4P51532 1647 aa33.82■■■■□ 3
SNRPN-207ENST00000554227 WIZO95785 1651 aa33.7■■■□□ 2.99
SNRPN-207ENST00000554227 EIF4G1Q04637 1599 aaKnown RBP33.51■■■□□ 2.95
SNRPN-207ENST00000554227 PEG3Q9GZU2 1588 aa33.35■■■□□ 2.93
SNRPN-207ENST00000554227 ATAD2BQ9ULI0 1458 aa33.31■■■□□ 2.92
SNRPN-207ENST00000554227 TOP2AP11388 1531 aaKnown RBP33.25■■■□□ 2.91
SNRPN-207ENST00000554227 SMARCA2P51531 1590 aa33.24■■■□□ 2.91
SNRPN-207ENST00000554227 BAZ1BQ9UIG0 1483 aaKnown RBP33.11■■■□□ 2.89
SNRPN-207ENST00000554227 CC2D2AQ9P2K1 1620 aa33.1■■■□□ 2.89
SNRPN-207ENST00000554227 NCAPD3P42695 1498 aa33.04■■■□□ 2.88
SNRPN-207ENST00000554227 CCDC88BA6NC98 1476 aa32.96■■■□□ 2.87
SNRPN-207ENST00000554227 HMGXB3Q12766 1538 aa32.95■■■□□ 2.87
SNRPN-207ENST00000554227 CHIC1Q5VXU3 224 aa32.65■■■□□ 2.82
SNRPN-207ENST00000554227 DNAJC5BQ9UF47 199 aa32.6■■■□□ 2.81
SNRPN-207ENST00000554227 CFTRP13569 1480 aa32.24■■■□□ 2.75
SNRPN-207ENST00000554227 ABCC8Q09428 1581 aa32.24■■■□□ 2.75
SNRPN-207ENST00000554227 CADPSQ9ULU8 1353 aa32.19■■■□□ 2.74
SNRPN-207ENST00000554227 TRIM41Q8WV44 630 aa32.19■■■□□ 2.74
SNRPN-207ENST00000554227 NESP48681 1621 aa32.1■■■□□ 2.73
SNRPN-207ENST00000554227 PRDM2Q13029 1718 aa32.08■■■□□ 2.73
SNRPN-207ENST00000554227 WRNQ14191 1432 aaPredicted RBP eCLIP31.97■■■□□ 2.71
SNRPN-207ENST00000554227 LAMC3Q9Y6N6 1575 aa31.95■■■□□ 2.7
SNRPN-207ENST00000554227 SYNJ1O43426 1573 aa31.91■■■□□ 2.7
SNRPN-207ENST00000554227 FANCD2Q9BXW9 1451 aa31.85■■■□□ 2.69
SNRPN-207ENST00000554227 CUX1P39880 1505 aa31.76■■■□□ 2.68
SNRPN-207ENST00000554227 TOP2BQ02880 1626 aa31.74■■■□□ 2.67
SNRPN-207ENST00000554227 BIVM-ERCC5R4GMW8 1640 aa31.72■■■□□ 2.67
SNRPN-207ENST00000554227 PDS5BQ9NTI5 1447 aa31.7■■■□□ 2.66
SNRPN-207ENST00000554227 FAM9AQ8IZU1 332 aaPredicted RBP31.69■■■□□ 2.66
SNRPN-207ENST00000554227 KIF21AQ7Z4S6 1674 aa31.69■■■□□ 2.66
SNRPN-207ENST00000554227 CEP164Q9UPV0 1460 aa31.65■■■□□ 2.66
SNRPN-207ENST00000554227 SOGA1O94964 1423 aa31.57■■■□□ 2.64
SNRPN-207ENST00000554227 RUSC2Q8N2Y8 1516 aa31.51■■■□□ 2.63
SNRPN-207ENST00000554227 URB2Q14146 1524 aaKnown RBP31.51■■■□□ 2.63
SNRPN-207ENST00000554227 DNMBPQ6XZF7 1577 aa31.51■■■□□ 2.63
SNRPN-207ENST00000554227 TOPBP1Q92547 1522 aa31.49■■■□□ 2.63
SNRPN-207ENST00000554227 LOC105371045A0A1W2PR82 267 aa31.47■■■□□ 2.63
SNRPN-207ENST00000554227 FGD5Q6ZNL6 1462 aa31.44■■■□□ 2.62
SNRPN-207ENST00000554227 ERCC6Q03468 1493 aa31.36■■■□□ 2.61
SNRPN-207ENST00000554227 MRC2Q9UBG0 1479 aa31.34■■■□□ 2.61
SNRPN-207ENST00000554227 EHMT2Q96KQ7 1210 aa31.33■■■□□ 2.61
SNRPN-207ENST00000554227 POLA1P09884 1462 aaPredicted RBP31.33■■■□□ 2.61
SNRPN-207ENST00000554227 EEA1Q15075 1411 aa31.29■■■□□ 2.6
SNRPN-207ENST00000554227 RAD54L2Q9Y4B4 1467 aa31.28■■■□□ 2.6
SNRPN-207ENST00000554227 CSRNP3Q8WYN3 585 aa31.26■■■□□ 2.59
SNRPN-207ENST00000554227 CUX2O14529 1486 aa31.19■■■□□ 2.58
SNRPN-207ENST00000554227 WDR62O43379 1518 aa31.18■■■□□ 2.58
SNRPN-207ENST00000554227 THOC2Q8NI27 1593 aaKnown RBP31.18■■■□□ 2.58
SNRPN-207ENST00000554227 KIF27Q86VH2 1401 aa31.17■■■□□ 2.58
SNRPN-207ENST00000554227 ABCA10Q8WWZ4 1543 aa31.11■■■□□ 2.57
SNRPN-207ENST00000554227 WDR97A6NE52 1622 aa31.08■■■□□ 2.57
SNRPN-207ENST00000554227 TARBP1Q13395 1621 aaKnown RBP31.05■■■□□ 2.56
SNRPN-207ENST00000554227 TDRD9Q8NDG6 1382 aaKnown RBP30.99■■■□□ 2.55
SNRPN-207ENST00000554227 KIF21BO75037 1637 aa30.97■■■□□ 2.55
SNRPN-207ENST00000554227 IGF1RP08069 1367 aa30.97■■■□□ 2.55
SNRPN-207ENST00000554227 GOLGA3Q08378 1498 aa30.92■■■□□ 2.54
SNRPN-207ENST00000554227 RAPGEF2Q9Y4G8 1499 aa30.92■■■□□ 2.54
SNRPN-207ENST00000554227 PRXQ9BXM0 1461 aa30.91■■■□□ 2.54
SNRPN-207ENST00000554227 ABCA5Q8WWZ7 1642 aa30.91■■■□□ 2.54
SNRPN-207ENST00000554227 IFT140Q96RY7 1462 aa30.9■■■□□ 2.54
SNRPN-207ENST00000554227 UBTFP17480 764 aaKnown RBP30.87■■■□□ 2.53
SNRPN-207ENST00000554227 GAPVD1Q14C86 1478 aa30.86■■■□□ 2.53
SNRPN-207ENST00000554227 ZNF608Q9ULD9 1512 aaPredicted RBP30.84■■■□□ 2.53
SNRPN-207ENST00000554227 AQRO60306 1485 aaKnown RBP eCLIP30.83■■■□□ 2.531e-6■□□□□ 10.6
SNRPN-207ENST00000554227 CARMIL1Q5VZK9 1371 aa30.79■■■□□ 2.52
SNRPN-207ENST00000554227 ERICH3Q5RHP9 1530 aa30.78■■■□□ 2.52
SNRPN-207ENST00000554227 TNIKQ9UKE5 1360 aa30.78■■■□□ 2.52
SNRPN-207ENST00000554227 PBRM1Q86U86 1689 aa30.73■■■□□ 2.51
SNRPN-207ENST00000554227 CUL7Q14999 1698 aa30.69■■■□□ 2.5
SNRPN-207ENST00000554227 EIF4G3O43432 1585 aaKnown RBP30.69■■■□□ 2.5
SNRPN-207ENST00000554227 CEP162Q5TB80 1403 aa30.63■■■□□ 2.49
SNRPN-207ENST00000554227 GRIN2BQ13224 1484 aa30.63■■■□□ 2.49
SNRPN-207ENST00000554227 RANGAP1P46060 587 aaPredicted RBP30.56■■■□□ 2.48
SNRPN-207ENST00000554227 ADAMTS12P58397 1594 aa30.52■■■□□ 2.48
SNRPN-207ENST00000554227 SNAPC4Q5SXM2 1469 aa30.5■■■□□ 2.47
SNRPN-207ENST00000554227 FHAD1B1AJZ9 1412 aa30.49■■■□□ 2.47
SNRPN-207ENST00000554227 CLIP1P30622 1438 aa30.45■■■□□ 2.47
SNRPN-207ENST00000554227 MAGI1Q96QZ7 1491 aaPredicted RBP30.38■■■□□ 2.45
SNRPN-207ENST00000554227 CTTNBP2Q8WZ74 1663 aa30.37■■■□□ 2.45
SNRPN-207ENST00000554227 SYNJ2O15056 1496 aa30.29■■■□□ 2.44
SNRPN-207ENST00000554227 FBLN2P98095 1184 aa30.28■■■□□ 2.44
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms