RNA–Protein interactions for RNA: ENST00000400100.5

SNRPN-205, Transcript of small nuclear ribonucleoprotein polypeptide N, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPN, Length 1,751 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPN-205ENST00000400100 NISCHQ9Y2I1 1504 aa31.69■■■□□ 2.66
SNRPN-205ENST00000400100 CCDC180Q9P1Z9 1646 aa28.16■■■□□ 2.1
SNRPN-205ENST00000400100 ABCC9O60706 1549 aa27.81■■■□□ 2.04
SNRPN-205ENST00000400100 DCAF8L2P0C7V8 631 aa26.75■■□□□ 1.87
SNRPN-205ENST00000400100 RB1CC1Q8TDY2 1594 aa26.6■■□□□ 1.85
SNRPN-205ENST00000400100 NACADO15069 1562 aa26.51■■□□□ 1.83
SNRPN-205ENST00000400100 ZCCHC6Q5VYS8 1495 aaKnown RBP26.36■■□□□ 1.81
SNRPN-205ENST00000400100 MYO15BQ96JP2 1530 aa26.24■■□□□ 1.79
SNRPN-205ENST00000400100 DCAF1Q9Y4B6 1507 aa26.12■■□□□ 1.77
SNRPN-205ENST00000400100 UNC13AQ9UPW8 1703 aa26.04■■□□□ 1.76
SNRPN-205ENST00000400100 PABPN1Q86U42 306 aaKnown RBP eCLIP26.02■■□□□ 1.76
SNRPN-205ENST00000400100 SCRIBQ14160 1630 aa25.83■■□□□ 1.73
SNRPN-205ENST00000400100 BICRAQ9NZM4 1560 aa25.8■■□□□ 1.72
SNRPN-205ENST00000400100 DNAJC5BQ9UF47 199 aa25.61■■□□□ 1.69
SNRPN-205ENST00000400100 SHROOM4Q9ULL8 1493 aa25.4■■□□□ 1.66
SNRPN-205ENST00000400100 EIF4G1Q04637 1599 aaKnown RBP25.15■■□□□ 1.62
SNRPN-205ENST00000400100 CC2D2AQ9P2K1 1620 aa25.09■■□□□ 1.61
SNRPN-205ENST00000400100 CECR2Q9BXF3 1484 aa24.95■■□□□ 1.58
SNRPN-205ENST00000400100 SMARCA4P51532 1647 aa24.62■■□□□ 1.53
SNRPN-205ENST00000400100 BAZ1AQ9NRL2 1556 aaPredicted RBP24.57■■□□□ 1.52
SNRPN-205ENST00000400100 ATAD2BQ9ULI0 1458 aa24.51■■□□□ 1.51
SNRPN-205ENST00000400100 NCAPD3P42695 1498 aa24.47■■□□□ 1.51
SNRPN-205ENST00000400100 MROH2BQ7Z745 1585 aa24.47■■□□□ 1.51
SNRPN-205ENST00000400100 SMARCA2P51531 1590 aa24.45■■□□□ 1.5
SNRPN-205ENST00000400100 BAZ1BQ9UIG0 1483 aaKnown RBP24.33■■□□□ 1.49
SNRPN-205ENST00000400100 HMGXB3Q12766 1538 aa24.33■■□□□ 1.49
SNRPN-205ENST00000400100 PEG3Q9GZU2 1588 aa24.31■■□□□ 1.48
SNRPN-205ENST00000400100 WIZO95785 1651 aa24.23■■□□□ 1.47
SNRPN-205ENST00000400100 RSF1Q96T23 1441 aaPredicted RBP24.13■■□□□ 1.45
SNRPN-205ENST00000400100 NESP48681 1621 aa24.03■■□□□ 1.44
SNRPN-205ENST00000400100 ERCC6Q03468 1493 aa23.97■■□□□ 1.43
SNRPN-205ENST00000400100 TOP2AP11388 1531 aaKnown RBP23.89■■□□□ 1.41
SNRPN-205ENST00000400100 LAMC3Q9Y6N6 1575 aa23.85■■□□□ 1.41
SNRPN-205ENST00000400100 CADPSQ9ULU8 1353 aa23.79■■□□□ 1.4
SNRPN-205ENST00000400100 PDS5BQ9NTI5 1447 aa23.72■■□□□ 1.39
SNRPN-205ENST00000400100 KIF21AQ7Z4S6 1674 aa23.71■■□□□ 1.39
SNRPN-205ENST00000400100 CCDC88BA6NC98 1476 aa23.66■■□□□ 1.38
SNRPN-205ENST00000400100 CUX2O14529 1486 aa23.63■■□□□ 1.37
SNRPN-205ENST00000400100 SUPT5HO00267 1087 aaKnown RBP23.63■■□□□ 1.37
SNRPN-205ENST00000400100 CFTRP13569 1480 aa23.61■■□□□ 1.37
SNRPN-205ENST00000400100 THOC2Q8NI27 1593 aaKnown RBP23.6■■□□□ 1.37
SNRPN-205ENST00000400100 FANCD2Q9BXW9 1451 aa23.55■■□□□ 1.36
SNRPN-205ENST00000400100 CEP164Q9UPV0 1460 aa23.52■■□□□ 1.36
SNRPN-205ENST00000400100 MRC2Q9UBG0 1479 aa23.49■■□□□ 1.35
SNRPN-205ENST00000400100 PRDM2Q13029 1718 aa23.42■■□□□ 1.34
SNRPN-205ENST00000400100 WDR62O43379 1518 aa23.39■■□□□ 1.33
SNRPN-205ENST00000400100 URB2Q14146 1524 aaKnown RBP23.31■■□□□ 1.32
SNRPN-205ENST00000400100 TOPBP1Q92547 1522 aa23.15■■□□□ 1.3
SNRPN-205ENST00000400100 DNMBPQ6XZF7 1577 aa23.09■■□□□ 1.29
SNRPN-205ENST00000400100 DNAJC5Q9H3Z4 198 aa23.09■■□□□ 1.29
SNRPN-205ENST00000400100 ABCC8Q09428 1581 aa23.08■■□□□ 1.29
SNRPN-205ENST00000400100 IFT140Q96RY7 1462 aa23■■□□□ 1.27
SNRPN-205ENST00000400100 ZNF608Q9ULD9 1512 aaPredicted RBP22.98■■□□□ 1.27
SNRPN-205ENST00000400100 POLA1P09884 1462 aaPredicted RBP22.95■■□□□ 1.26
SNRPN-205ENST00000400100 CUX1P39880 1505 aa22.95■■□□□ 1.26
SNRPN-205ENST00000400100 RAD54L2Q9Y4B4 1467 aa22.91■■□□□ 1.26
SNRPN-205ENST00000400100 FGD5Q6ZNL6 1462 aa22.9■■□□□ 1.26
SNRPN-205ENST00000400100 TARBP1Q13395 1621 aaKnown RBP22.88■■□□□ 1.25
SNRPN-205ENST00000400100 SOGA1O94964 1423 aa22.88■■□□□ 1.25
SNRPN-205ENST00000400100 EIF4G3O43432 1585 aaKnown RBP22.85■■□□□ 1.25
SNRPN-205ENST00000400100 AQRO60306 1485 aaKnown RBP eCLIP22.85■■□□□ 1.251e-6■□□□□ 10.6
SNRPN-205ENST00000400100 TDRD9Q8NDG6 1382 aaKnown RBP22.81■■□□□ 1.24
SNRPN-205ENST00000400100 WRNQ14191 1432 aaPredicted RBP eCLIP22.78■■□□□ 1.24
SNRPN-205ENST00000400100 OSCARQ8IYS5 282 aa22.73■■□□□ 1.23
SNRPN-205ENST00000400100 SYNJ1O43426 1573 aa22.73■■□□□ 1.23
SNRPN-205ENST00000400100 TOP2BQ02880 1626 aa22.7■■□□□ 1.22
SNRPN-205ENST00000400100 FBLN2P98095 1184 aa22.69■■□□□ 1.22
SNRPN-205ENST00000400100 BIVM-ERCC5R4GMW8 1640 aa22.68■■□□□ 1.22
SNRPN-205ENST00000400100 WDR97A6NE52 1622 aa22.66■■□□□ 1.22
SNRPN-205ENST00000400100 ABCA10Q8WWZ4 1543 aa22.62■■□□□ 1.21
SNRPN-205ENST00000400100 SNAPC4Q5SXM2 1469 aa22.61■■□□□ 1.21
SNRPN-205ENST00000400100 CHD1O14646 1710 aa22.6■■□□□ 1.21
SNRPN-205ENST00000400100 GAPVD1Q14C86 1478 aa22.6■■□□□ 1.21
SNRPN-205ENST00000400100 GRIN2BQ13224 1484 aa22.59■■□□□ 1.21
SNRPN-205ENST00000400100 PBRM1Q86U86 1689 aa22.55■■□□□ 1.2
SNRPN-205ENST00000400100 ABCA5Q8WWZ7 1642 aa22.54■■□□□ 1.2
SNRPN-205ENST00000400100 CHMP7Q8WUX9 453 aaPredicted RBP22.54■■□□□ 1.2
SNRPN-205ENST00000400100 MAGI1Q96QZ7 1491 aaPredicted RBP22.51■■□□□ 1.19
SNRPN-205ENST00000400100 SYNJ2O15056 1496 aa22.45■■□□□ 1.18
SNRPN-205ENST00000400100 TRIM41Q8WV44 630 aa22.44■■□□□ 1.18
SNRPN-205ENST00000400100 RIMBP3CA6NJZ7 1639 aa22.36■■□□□ 1.17
SNRPN-205ENST00000400100 RIMBP3BA6NNM3 1639 aa22.36■■□□□ 1.17
SNRPN-205ENST00000400100 RIMBP3Q9UFD9 1639 aa22.36■■□□□ 1.17
SNRPN-205ENST00000400100 ADAMTS12P58397 1594 aa22.35■■□□□ 1.17
SNRPN-205ENST00000400100 ERICH3Q5RHP9 1530 aa22.34■■□□□ 1.17
SNRPN-205ENST00000400100 ARHGEF11O15085 1522 aa22.33■■□□□ 1.17
SNRPN-205ENST00000400100 FHAD1B1AJZ9 1412 aa22.31■■□□□ 1.16
SNRPN-205ENST00000400100 GRIN2AQ12879 1464 aa22.3■■□□□ 1.16
SNRPN-205ENST00000400100 KIF27Q86VH2 1401 aa22.3■■□□□ 1.16
SNRPN-205ENST00000400100 CLASP1Q7Z460 1538 aa22.29■■□□□ 1.16
SNRPN-205ENST00000400100 CYB5RLQ6IPT4 315 aa22.23■■□□□ 1.15
SNRPN-205ENST00000400100 IGF1RP08069 1367 aa22.22■■□□□ 1.15
SNRPN-205ENST00000400100 CEP170Q5SW79 1584 aa22.21■■□□□ 1.15
SNRPN-205ENST00000400100 NUP160Q12769 1436 aa22.17■■□□□ 1.14
SNRPN-205ENST00000400100 ARAP1Q96P48 1450 aa22.15■■□□□ 1.14
SNRPN-205ENST00000400100 RUSC2Q8N2Y8 1516 aa22.14■■□□□ 1.13
SNRPN-205ENST00000400100 CUL7Q14999 1698 aa22.13■■□□□ 1.13
SNRPN-205ENST00000400100 CARMIL1Q5VZK9 1371 aa22.1■■□□□ 1.13
SNRPN-205ENST00000400100 ERCC6L2Q5T890 1561 aa22.06■■□□□ 1.12
SNRPN-205ENST00000400100 JPH4Q96JJ6 628 aa22.02■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms