RNA–Protein interactions for RNA: ENST00000358358.9

ECHDC2-201, Transcript of enoyl-CoA hydratase domain containing 2, humanhuman

TSL 2 BASIC

Gene ECHDC2, Length 1,126 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC2-201ENST00000358358 NISCHQ9Y2I1 1504 aa30.9■■■□□ 2.54
ECHDC2-201ENST00000358358 ABCC9O60706 1549 aa28.79■■■□□ 2.2
ECHDC2-201ENST00000358358 CCDC180Q9P1Z9 1646 aa27.99■■■□□ 2.07
ECHDC2-201ENST00000358358 DNAJC5BQ9UF47 199 aa27.6■■■□□ 2.01
ECHDC2-201ENST00000358358 RB1CC1Q8TDY2 1594 aa27.05■■□□□ 1.92
ECHDC2-201ENST00000358358 PABPN1Q86U42 306 aaKnown RBP eCLIP26.75■■□□□ 1.877e-7■□□□□ 10.8
ECHDC2-201ENST00000358358 NACADO15069 1562 aa26.65■■□□□ 1.86
ECHDC2-201ENST00000358358 DCAF8L2P0C7V8 631 aa26.63■■□□□ 1.85
ECHDC2-201ENST00000358358 UNC13AQ9UPW8 1703 aa26.39■■□□□ 1.82
ECHDC2-201ENST00000358358 BICRAQ9NZM4 1560 aa26.23■■□□□ 1.79
ECHDC2-201ENST00000358358 CECR2Q9BXF3 1484 aa25.98■■□□□ 1.75
ECHDC2-201ENST00000358358 MYO15BQ96JP2 1530 aa25.98■■□□□ 1.75
ECHDC2-201ENST00000358358 CC2D2AQ9P2K1 1620 aa25.92■■□□□ 1.74
ECHDC2-201ENST00000358358 DNAJC5Q9H3Z4 198 aa25.85■■□□□ 1.73
ECHDC2-201ENST00000358358 SHROOM4Q9ULL8 1493 aa25.76■■□□□ 1.71
ECHDC2-201ENST00000358358 ZCCHC6Q5VYS8 1495 aaKnown RBP25.7■■□□□ 1.7
ECHDC2-201ENST00000358358 EIF4G1Q04637 1599 aaKnown RBP25.68■■□□□ 1.7
ECHDC2-201ENST00000358358 SCRIBQ14160 1630 aa25.56■■□□□ 1.68
ECHDC2-201ENST00000358358 DCAF1Q9Y4B6 1507 aa25.53■■□□□ 1.68
ECHDC2-201ENST00000358358 CUX2O14529 1486 aa25.02■■□□□ 1.6
ECHDC2-201ENST00000358358 ERCC6Q03468 1493 aa24.94■■□□□ 1.58
ECHDC2-201ENST00000358358 NCAPD3P42695 1498 aa24.61■■□□□ 1.53
ECHDC2-201ENST00000358358 TRIM41Q8WV44 630 aa24.57■■□□□ 1.52
ECHDC2-201ENST00000358358 NESP48681 1621 aa24.52■■□□□ 1.52
ECHDC2-201ENST00000358358 ATAD2BQ9ULI0 1458 aa24.46■■□□□ 1.51
ECHDC2-201ENST00000358358 SMARCA2P51531 1590 aa24.35■■□□□ 1.49
ECHDC2-201ENST00000358358 HMGXB3Q12766 1538 aa24.35■■□□□ 1.49
ECHDC2-201ENST00000358358 THOC2Q8NI27 1593 aaKnown RBP24.33■■□□□ 1.49
ECHDC2-201ENST00000358358 SMARCA4P51532 1647 aa24.25■■□□□ 1.47
ECHDC2-201ENST00000358358 BAZ1BQ9UIG0 1483 aaKnown RBP24.23■■□□□ 1.47
ECHDC2-201ENST00000358358 LAMC3Q9Y6N6 1575 aa24.18■■□□□ 1.46
ECHDC2-201ENST00000358358 KIF21AQ7Z4S6 1674 aa24.15■■□□□ 1.46
ECHDC2-201ENST00000358358 PDS5BQ9NTI5 1447 aa24.11■■□□□ 1.45
ECHDC2-201ENST00000358358 BAZ1AQ9NRL2 1556 aaPredicted RBP24.04■■□□□ 1.44
ECHDC2-201ENST00000358358 PEG3Q9GZU2 1588 aa23.95■■□□□ 1.43
ECHDC2-201ENST00000358358 MRC2Q9UBG0 1479 aa23.93■■□□□ 1.42
ECHDC2-201ENST00000358358 CADPSQ9ULU8 1353 aa23.88■■□□□ 1.41
ECHDC2-201ENST00000358358 OSCARQ8IYS5 282 aa23.86■■□□□ 1.41
ECHDC2-201ENST00000358358 WDR62O43379 1518 aa23.84■■□□□ 1.41
ECHDC2-201ENST00000358358 MROH2BQ7Z745 1585 aa23.82■■□□□ 1.4
ECHDC2-201ENST00000358358 CEP164Q9UPV0 1460 aa23.71■■□□□ 1.39
ECHDC2-201ENST00000358358 RSF1Q96T23 1441 aaPredicted RBP23.63■■□□□ 1.37
ECHDC2-201ENST00000358358 FANCD2Q9BXW9 1451 aa23.62■■□□□ 1.37
ECHDC2-201ENST00000358358 RIMBP3CA6NJZ7 1639 aa23.57■■□□□ 1.36
ECHDC2-201ENST00000358358 RIMBP3BA6NNM3 1639 aa23.57■■□□□ 1.36
ECHDC2-201ENST00000358358 RIMBP3Q9UFD9 1639 aa23.57■■□□□ 1.36
ECHDC2-201ENST00000358358 WIZO95785 1651 aa23.53■■□□□ 1.36
ECHDC2-201ENST00000358358 SUPT5HO00267 1087 aaKnown RBP23.48■■□□□ 1.35
ECHDC2-201ENST00000358358 URB2Q14146 1524 aaKnown RBP23.44■■□□□ 1.34
ECHDC2-201ENST00000358358 TRHP20396 242 aaPredicted RBP23.43■■□□□ 1.34
ECHDC2-201ENST00000358358 ARHGEF11O15085 1522 aa23.42■■□□□ 1.34
ECHDC2-201ENST00000358358 CFTRP13569 1480 aa23.42■■□□□ 1.34
ECHDC2-201ENST00000358358 CYB5RLQ6IPT4 315 aa23.39■■□□□ 1.33
ECHDC2-201ENST00000358358 ZNF608Q9ULD9 1512 aaPredicted RBP23.29■■□□□ 1.32
ECHDC2-201ENST00000358358 AEBP2Q6ZN18 517 aaPredicted RBP23.27■■□□□ 1.32
ECHDC2-201ENST00000358358 IFT140Q96RY7 1462 aa23.24■■□□□ 1.31
ECHDC2-201ENST00000358358 TOP2AP11388 1531 aaKnown RBP23.23■■□□□ 1.31
ECHDC2-201ENST00000358358 ARAP1Q96P48 1450 aa23.13■■□□□ 1.29
ECHDC2-201ENST00000358358 FBLN2P98095 1184 aa23.13■■□□□ 1.29
ECHDC2-201ENST00000358358 PRDM2Q13029 1718 aa23.11■■□□□ 1.29
ECHDC2-201ENST00000358358 EIF4G3O43432 1585 aaKnown RBP23.1■■□□□ 1.29
ECHDC2-201ENST00000358358 CHD1O14646 1710 aa23.08■■□□□ 1.29
ECHDC2-201ENST00000358358 TOPBP1Q92547 1522 aa23.08■■□□□ 1.28
ECHDC2-201ENST00000358358 AQRO60306 1485 aaKnown RBP eCLIP23.03■■□□□ 1.283e-6■■■□□ 18.1
ECHDC2-201ENST00000358358 ABCC8Q09428 1581 aa22.97■■□□□ 1.27
ECHDC2-201ENST00000358358 CCDC88BA6NC98 1476 aa22.95■■□□□ 1.26
ECHDC2-201ENST00000358358 DNMBPQ6XZF7 1577 aa22.92■■□□□ 1.26
ECHDC2-201ENST00000358358 TARBP1Q13395 1621 aaKnown RBP22.89■■□□□ 1.25
ECHDC2-201ENST00000358358 TDRD9Q8NDG6 1382 aaKnown RBP22.79■■□□□ 1.24
ECHDC2-201ENST00000358358 CHMP7Q8WUX9 453 aaPredicted RBP22.79■■□□□ 1.24
ECHDC2-201ENST00000358358 POLA1P09884 1462 aaPredicted RBP22.79■■□□□ 1.24
ECHDC2-201ENST00000358358 RAD54L2Q9Y4B4 1467 aa22.77■■□□□ 1.24
ECHDC2-201ENST00000358358 SNAPC4Q5SXM2 1469 aa22.75■■□□□ 1.23
ECHDC2-201ENST00000358358 CLASP1Q7Z460 1538 aa22.75■■□□□ 1.23
ECHDC2-201ENST00000358358 SYNJ1O43426 1573 aa22.73■■□□□ 1.23
ECHDC2-201ENST00000358358 SOGA1O94964 1423 aa22.73■■□□□ 1.23
ECHDC2-201ENST00000358358 GAPVD1Q14C86 1478 aa22.63■■□□□ 1.21
ECHDC2-201ENST00000358358 MAGI1Q96QZ7 1491 aaPredicted RBP22.62■■□□□ 1.21
ECHDC2-201ENST00000358358 GRIN2BQ13224 1484 aa22.58■■□□□ 1.2
ECHDC2-201ENST00000358358 WDR97A6NE52 1622 aa22.57■■□□□ 1.2
ECHDC2-201ENST00000358358 SYNJ2O15056 1496 aa22.57■■□□□ 1.2
ECHDC2-201ENST00000358358 FGD5Q6ZNL6 1462 aa22.57■■□□□ 1.2
ECHDC2-201ENST00000358358 PBRM1Q86U86 1689 aa22.43■■□□□ 1.18
ECHDC2-201ENST00000358358 CUX1P39880 1505 aa22.42■■□□□ 1.18
ECHDC2-201ENST00000358358 ERCC6L2Q5T890 1561 aa22.4■■□□□ 1.18
ECHDC2-201ENST00000358358 CHIC1Q5VXU3 224 aa22.35■■□□□ 1.17
ECHDC2-201ENST00000358358 CEP170Q5SW79 1584 aa22.29■■□□□ 1.16
ECHDC2-201ENST00000358358 KIF13AQ9H1H9 1805 aa22.28■■□□□ 1.16
ECHDC2-201ENST00000358358 WRNQ14191 1432 aaPredicted RBP eCLIP22.28■■□□□ 1.16
ECHDC2-201ENST00000358358 GRIN2AQ12879 1464 aa22.28■■□□□ 1.16
ECHDC2-201ENST00000358358 ABCA5Q8WWZ7 1642 aa22.25■■□□□ 1.15
ECHDC2-201ENST00000358358 ILDR1Q86SU0 546 aaPredicted RBP22.25■■□□□ 1.15
ECHDC2-201ENST00000358358 ABCA10Q8WWZ4 1543 aa22.23■■□□□ 1.15
ECHDC2-201ENST00000358358 FAM69CQ0P6D2 419 aa22.21■■□□□ 1.15
ECHDC2-201ENST00000358358 NUP160Q12769 1436 aa22.19■■□□□ 1.14
ECHDC2-201ENST00000358358 SHROOM2Q13796 1616 aa22.16■■□□□ 1.14
ECHDC2-201ENST00000358358 ADAMTS12P58397 1594 aa22.16■■□□□ 1.14
ECHDC2-201ENST00000358358 KDM4FA0A1W2PPD8 638 aa22.15■■□□□ 1.14
ECHDC2-201ENST00000358358 NPM1P06748 294 aaKnown RBP eCLIP22.15■■□□□ 1.14
ECHDC2-201ENST00000358358 TOP2BQ02880 1626 aa22.14■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms