RNA–Protein interactions for RNA: ENST00000577565.1

SNRPN-208, Transcript of small nuclear ribonucleoprotein polypeptide N, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SNRPN, Length 1,298 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPN-208ENST00000577565 NISCHQ9Y2I1 1504 aa30.18■■■□□ 2.42
SNRPN-208ENST00000577565 ABCC9O60706 1549 aa27.8■■■□□ 2.04
SNRPN-208ENST00000577565 CCDC180Q9P1Z9 1646 aa27.27■■□□□ 1.96
SNRPN-208ENST00000577565 DNAJC5BQ9UF47 199 aa26.59■■□□□ 1.85
SNRPN-208ENST00000577565 RB1CC1Q8TDY2 1594 aa26.18■■□□□ 1.78
SNRPN-208ENST00000577565 NACADO15069 1562 aa25.89■■□□□ 1.73
SNRPN-208ENST00000577565 PABPN1Q86U42 306 aaKnown RBP eCLIP25.79■■□□□ 1.72
SNRPN-208ENST00000577565 UNC13AQ9UPW8 1703 aa25.66■■□□□ 1.7
SNRPN-208ENST00000577565 DCAF8L2P0C7V8 631 aa25.57■■□□□ 1.68
SNRPN-208ENST00000577565 BICRAQ9NZM4 1560 aa25.55■■□□□ 1.68
SNRPN-208ENST00000577565 MYO15BQ96JP2 1530 aa25.38■■□□□ 1.65
SNRPN-208ENST00000577565 CC2D2AQ9P2K1 1620 aa25.08■■□□□ 1.61
SNRPN-208ENST00000577565 CECR2Q9BXF3 1484 aa25.07■■□□□ 1.6
SNRPN-208ENST00000577565 SHROOM4Q9ULL8 1493 aa25.04■■□□□ 1.6
SNRPN-208ENST00000577565 ZCCHC6Q5VYS8 1495 aaKnown RBP24.93■■□□□ 1.58
SNRPN-208ENST00000577565 EIF4G1Q04637 1599 aaKnown RBP24.91■■□□□ 1.58
SNRPN-208ENST00000577565 DCAF1Q9Y4B6 1507 aa24.88■■□□□ 1.57
SNRPN-208ENST00000577565 SCRIBQ14160 1630 aa24.84■■□□□ 1.57
SNRPN-208ENST00000577565 DNAJC5Q9H3Z4 198 aa24.69■■□□□ 1.54
SNRPN-208ENST00000577565 CUX2O14529 1486 aa24.12■■□□□ 1.45
SNRPN-208ENST00000577565 ERCC6Q03468 1493 aa23.96■■□□□ 1.43
SNRPN-208ENST00000577565 NCAPD3P42695 1498 aa23.94■■□□□ 1.42
SNRPN-208ENST00000577565 ATAD2BQ9ULI0 1458 aa23.81■■□□□ 1.4
SNRPN-208ENST00000577565 NESP48681 1621 aa23.77■■□□□ 1.4
SNRPN-208ENST00000577565 HMGXB3Q12766 1538 aa23.71■■□□□ 1.39
SNRPN-208ENST00000577565 SMARCA2P51531 1590 aa23.65■■□□□ 1.38
SNRPN-208ENST00000577565 SMARCA4P51532 1647 aa23.65■■□□□ 1.38
SNRPN-208ENST00000577565 THOC2Q8NI27 1593 aaKnown RBP23.63■■□□□ 1.37
SNRPN-208ENST00000577565 BAZ1BQ9UIG0 1483 aaKnown RBP23.5■■□□□ 1.35
SNRPN-208ENST00000577565 LAMC3Q9Y6N6 1575 aa23.44■■□□□ 1.34
SNRPN-208ENST00000577565 PEG3Q9GZU2 1588 aa23.44■■□□□ 1.34
SNRPN-208ENST00000577565 BAZ1AQ9NRL2 1556 aaPredicted RBP23.42■■□□□ 1.34
SNRPN-208ENST00000577565 KIF21AQ7Z4S6 1674 aa23.41■■□□□ 1.34
SNRPN-208ENST00000577565 TRIM41Q8WV44 630 aa23.37■■□□□ 1.33
SNRPN-208ENST00000577565 MROH2BQ7Z745 1585 aa23.29■■□□□ 1.32
SNRPN-208ENST00000577565 PDS5BQ9NTI5 1447 aa23.29■■□□□ 1.32
SNRPN-208ENST00000577565 MRC2Q9UBG0 1479 aa23.17■■□□□ 1.3
SNRPN-208ENST00000577565 WDR62O43379 1518 aa23.17■■□□□ 1.3
SNRPN-208ENST00000577565 CADPSQ9ULU8 1353 aa23.16■■□□□ 1.3
SNRPN-208ENST00000577565 CEP164Q9UPV0 1460 aa22.97■■□□□ 1.27
SNRPN-208ENST00000577565 WIZO95785 1651 aa22.96■■□□□ 1.27
SNRPN-208ENST00000577565 FANCD2Q9BXW9 1451 aa22.92■■□□□ 1.26
SNRPN-208ENST00000577565 OSCARQ8IYS5 282 aa22.88■■□□□ 1.25
SNRPN-208ENST00000577565 CFTRP13569 1480 aa22.82■■□□□ 1.24
SNRPN-208ENST00000577565 URB2Q14146 1524 aaKnown RBP22.81■■□□□ 1.24
SNRPN-208ENST00000577565 RIMBP3CA6NJZ7 1639 aa22.74■■□□□ 1.23
SNRPN-208ENST00000577565 RIMBP3BA6NNM3 1639 aa22.74■■□□□ 1.23
SNRPN-208ENST00000577565 RIMBP3Q9UFD9 1639 aa22.74■■□□□ 1.23
SNRPN-208ENST00000577565 ARHGEF11O15085 1522 aa22.62■■□□□ 1.21
SNRPN-208ENST00000577565 TOP2AP11388 1531 aaKnown RBP22.62■■□□□ 1.21
SNRPN-208ENST00000577565 ZNF608Q9ULD9 1512 aaPredicted RBP22.62■■□□□ 1.21
SNRPN-208ENST00000577565 RSF1Q96T23 1441 aaPredicted RBP22.6■■□□□ 1.21
SNRPN-208ENST00000577565 IFT140Q96RY7 1462 aa22.52■■□□□ 1.2
SNRPN-208ENST00000577565 PRDM2Q13029 1718 aa22.51■■□□□ 1.19
SNRPN-208ENST00000577565 TOPBP1Q92547 1522 aa22.45■■□□□ 1.18
SNRPN-208ENST00000577565 EIF4G3O43432 1585 aaKnown RBP22.44■■□□□ 1.18
SNRPN-208ENST00000577565 CYB5RLQ6IPT4 315 aa22.41■■□□□ 1.18
SNRPN-208ENST00000577565 ARAP1Q96P48 1450 aa22.39■■□□□ 1.17
SNRPN-208ENST00000577565 CCDC88BA6NC98 1476 aa22.37■■□□□ 1.17
SNRPN-208ENST00000577565 CHD1O14646 1710 aa22.35■■□□□ 1.17
SNRPN-208ENST00000577565 AQRO60306 1485 aaKnown RBP eCLIP22.31■■□□□ 1.161e-6■□□□□ 10.6
SNRPN-208ENST00000577565 TARBP1Q13395 1621 aaKnown RBP22.31■■□□□ 1.16
SNRPN-208ENST00000577565 DNMBPQ6XZF7 1577 aa22.29■■□□□ 1.16
SNRPN-208ENST00000577565 TRHP20396 242 aaPredicted RBP22.27■■□□□ 1.16
SNRPN-208ENST00000577565 ABCC8Q09428 1581 aa22.26■■□□□ 1.15
SNRPN-208ENST00000577565 POLA1P09884 1462 aaPredicted RBP22.19■■□□□ 1.14
SNRPN-208ENST00000577565 FBLN2P98095 1184 aa22.17■■□□□ 1.14
SNRPN-208ENST00000577565 RAD54L2Q9Y4B4 1467 aa22.13■■□□□ 1.13
SNRPN-208ENST00000577565 CLASP1Q7Z460 1538 aa22.11■■□□□ 1.13
SNRPN-208ENST00000577565 TDRD9Q8NDG6 1382 aaKnown RBP22.08■■□□□ 1.12
SNRPN-208ENST00000577565 SNAPC4Q5SXM2 1469 aa22.07■■□□□ 1.12
SNRPN-208ENST00000577565 SOGA1O94964 1423 aa22.03■■□□□ 1.12
SNRPN-208ENST00000577565 FGD5Q6ZNL6 1462 aa21.97■■□□□ 1.11
SNRPN-208ENST00000577565 SYNJ1O43426 1573 aa21.97■■□□□ 1.11
SNRPN-208ENST00000577565 WDR97A6NE52 1622 aa21.96■■□□□ 1.11
SNRPN-208ENST00000577565 AEBP2Q6ZN18 517 aaPredicted RBP21.95■■□□□ 1.1
SNRPN-208ENST00000577565 MAGI1Q96QZ7 1491 aaPredicted RBP21.95■■□□□ 1.1
SNRPN-208ENST00000577565 CHMP7Q8WUX9 453 aaPredicted RBP21.92■■□□□ 1.1
SNRPN-208ENST00000577565 CUX1P39880 1505 aa21.9■■□□□ 1.1
SNRPN-208ENST00000577565 GRIN2BQ13224 1484 aa21.9■■□□□ 1.1
SNRPN-208ENST00000577565 SYNJ2O15056 1496 aa21.9■■□□□ 1.1
SNRPN-208ENST00000577565 GAPVD1Q14C86 1478 aa21.87■■□□□ 1.09
SNRPN-208ENST00000577565 PBRM1Q86U86 1689 aa21.8■■□□□ 1.08
SNRPN-208ENST00000577565 ERCC6L2Q5T890 1561 aa21.78■■□□□ 1.08
SNRPN-208ENST00000577565 ABCA5Q8WWZ7 1642 aa21.73■■□□□ 1.07
SNRPN-208ENST00000577565 ABCA10Q8WWZ4 1543 aa21.68■■□□□ 1.06
SNRPN-208ENST00000577565 GRIN2AQ12879 1464 aa21.64■■□□□ 1.06
SNRPN-208ENST00000577565 CEP170Q5SW79 1584 aa21.64■■□□□ 1.05
SNRPN-208ENST00000577565 NUP160Q12769 1436 aa21.62■■□□□ 1.05
SNRPN-208ENST00000577565 ADAMTS12P58397 1594 aa21.59■■□□□ 1.05
SNRPN-208ENST00000577565 SHROOM2Q13796 1616 aa21.58■■□□□ 1.04
SNRPN-208ENST00000577565 KIF13AQ9H1H9 1805 aa21.56■■□□□ 1.04
SNRPN-208ENST00000577565 FHAD1B1AJZ9 1412 aa21.46■■□□□ 1.03
SNRPN-208ENST00000577565 WRNQ14191 1432 aaPredicted RBP eCLIP21.45■■□□□ 1.02
SNRPN-208ENST00000577565 PRG4Q92954 1404 aaPredicted RBP21.4■■□□□ 1.02
SNRPN-208ENST00000577565 BIVM-ERCC5R4GMW8 1640 aa21.39■■□□□ 1.01
SNRPN-208ENST00000577565 ERICH3Q5RHP9 1530 aa21.38■■□□□ 1.01
SNRPN-208ENST00000577565 TOP2BQ02880 1626 aa21.37■■□□□ 1.01
SNRPN-208ENST00000577565 ABCC10Q5T3U5 1492 aa21.37■■□□□ 1.01
SNRPN-208ENST00000577565 DIP2BQ9P265 1576 aa21.32■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms