RNA–Protein interactions for RNA: ENST00000431623.6

POLR2B-203, Transcript of RNA polymerase II subunit B, humanhuman

TSL 2 BASIC

Gene POLR2B, Length 3,666 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2B-203ENST00000431623 NISCHQ9Y2I1 1504 aa10.95□□□□□ -0.66
POLR2B-203ENST00000431623 CCDC180Q9P1Z9 1646 aa9.84□□□□□ -0.83
POLR2B-203ENST00000431623 DCAF1Q9Y4B6 1507 aa9.27□□□□□ -0.92
POLR2B-203ENST00000431623 MYO15BQ96JP2 1530 aa9.26□□□□□ -0.93
POLR2B-203ENST00000431623 ZCCHC6Q5VYS8 1495 aaKnown RBP9.21□□□□□ -0.94
POLR2B-203ENST00000431623 NACADO15069 1562 aa9.12□□□□□ -0.95
POLR2B-203ENST00000431623 RB1CC1Q8TDY2 1594 aa9.03□□□□□ -0.96
POLR2B-203ENST00000431623 ABCC9O60706 1549 aa8.98□□□□□ -0.97
POLR2B-203ENST00000431623 SHROOM4Q9ULL8 1493 aa8.9□□□□□ -0.99
POLR2B-203ENST00000431623 AEBP2Q6ZN18 517 aaPredicted RBP8.86□□□□□ -0.99
POLR2B-203ENST00000431623 UNC13AQ9UPW8 1703 aa8.75□□□□□ -1.01
POLR2B-203ENST00000431623 SCRIBQ14160 1630 aa8.69□□□□□ -1.02
POLR2B-203ENST00000431623 CHIC1Q5VXU3 224 aa8.67□□□□□ -1.02
POLR2B-203ENST00000431623 BICRAQ9NZM4 1560 aa8.65□□□□□ -1.03
POLR2B-203ENST00000431623 DCAF8L2P0C7V8 631 aa8.6□□□□□ -1.03
POLR2B-203ENST00000431623 BAZ1AQ9NRL2 1556 aaPredicted RBP8.53□□□□□ -1.04
POLR2B-203ENST00000431623 PEG3Q9GZU2 1588 aa8.5□□□□□ -1.05
POLR2B-203ENST00000431623 SMARCA4P51532 1647 aa8.46□□□□□ -1.05
POLR2B-203ENST00000431623 SMARCA2P51531 1590 aa8.44□□□□□ -1.06
POLR2B-203ENST00000431623 EIF4G1Q04637 1599 aaKnown RBP8.4□□□□□ -1.06
POLR2B-203ENST00000431623 HMGXB3Q12766 1538 aa8.4□□□□□ -1.07
POLR2B-203ENST00000431623 RSF1Q96T23 1441 aaPredicted RBP8.34□□□□□ -1.07
POLR2B-203ENST00000431623 TOP2AP11388 1531 aaKnown RBP8.34□□□□□ -1.07
POLR2B-203ENST00000431623 MROH2BQ7Z745 1585 aa8.34□□□□□ -1.08
POLR2B-203ENST00000431623 NCAPD3P42695 1498 aa8.33□□□□□ -1.08
POLR2B-203ENST00000431623 CECR2Q9BXF3 1484 aa8.32□□□□□ -1.08
POLR2B-203ENST00000431623 ATAD2BQ9ULI0 1458 aa8.3□□□□□ -1.08
POLR2B-203ENST00000431623 PABPN1Q86U42 306 aaKnown RBP eCLIP8.29□□□□□ -1.08
POLR2B-203ENST00000431623 CC2D2AQ9P2K1 1620 aa8.28□□□□□ -1.08
POLR2B-203ENST00000431623 WIZO95785 1651 aa8.26□□□□□ -1.09
POLR2B-203ENST00000431623 BAZ1BQ9UIG0 1483 aaKnown RBP8.25□□□□□ -1.09
POLR2B-203ENST00000431623 PRDM2Q13029 1718 aa8.21□□□□□ -1.1
POLR2B-203ENST00000431623 LAMC3Q9Y6N6 1575 aa8.13□□□□□ -1.11
POLR2B-203ENST00000431623 CCDC88BA6NC98 1476 aa8.1□□□□□ -1.11
POLR2B-203ENST00000431623 CFTRP13569 1480 aa8.07□□□□□ -1.12
POLR2B-203ENST00000431623 CADPSQ9ULU8 1353 aa8.02□□□□□ -1.13
POLR2B-203ENST00000431623 ABCC8Q09428 1581 aa8.02□□□□□ -1.13
POLR2B-203ENST00000431623 SUPT5HO00267 1087 aaKnown RBP8.01□□□□□ -1.13
POLR2B-203ENST00000431623 PDS5BQ9NTI5 1447 aa7.99□□□□□ -1.13
POLR2B-203ENST00000431623 BIVM-ERCC5R4GMW8 1640 aa7.98□□□□□ -1.13
POLR2B-203ENST00000431623 WDR97A6NE52 1622 aa7.98□□□□□ -1.13
POLR2B-203ENST00000431623 TOP2BQ02880 1626 aa7.94□□□□□ -1.14
POLR2B-203ENST00000431623 DNMBPQ6XZF7 1577 aa7.94□□□□□ -1.14
POLR2B-203ENST00000431623 CEP164Q9UPV0 1460 aa7.93□□□□□ -1.14
POLR2B-203ENST00000431623 FANCD2Q9BXW9 1451 aa7.92□□□□□ -1.14
POLR2B-203ENST00000431623 WDR62O43379 1518 aa7.91□□□□□ -1.14
POLR2B-203ENST00000431623 MRC2Q9UBG0 1479 aa7.9□□□□□ -1.14
POLR2B-203ENST00000431623 KIF21AQ7Z4S6 1674 aa7.89□□□□□ -1.15
POLR2B-203ENST00000431623 EEA1Q15075 1411 aa7.88□□□□□ -1.15
POLR2B-203ENST00000431623 THOC2Q8NI27 1593 aaKnown RBP7.88□□□□□ -1.15
POLR2B-203ENST00000431623 WRNQ14191 1432 aaPredicted RBP eCLIP7.88□□□□□ -1.15
POLR2B-203ENST00000431623 DNAJC5BQ9UF47 199 aa7.87□□□□□ -1.15
POLR2B-203ENST00000431623 CUX1P39880 1505 aa7.84□□□□□ -1.15
POLR2B-203ENST00000431623 TOPBP1Q92547 1522 aa7.84□□□□□ -1.15
POLR2B-203ENST00000431623 SYNJ1O43426 1573 aa7.84□□□□□ -1.15
POLR2B-203ENST00000431623 CUX2O14529 1486 aa7.83□□□□□ -1.16
POLR2B-203ENST00000431623 NESP48681 1621 aa7.83□□□□□ -1.16
POLR2B-203ENST00000431623 URB2Q14146 1524 aaKnown RBP7.81□□□□□ -1.16
POLR2B-203ENST00000431623 IFT140Q96RY7 1462 aa7.81□□□□□ -1.16
POLR2B-203ENST00000431623 ABCA10Q8WWZ4 1543 aa7.81□□□□□ -1.16
POLR2B-203ENST00000431623 ERCC6Q03468 1493 aa7.8□□□□□ -1.16
POLR2B-203ENST00000431623 TARBP1Q13395 1621 aaKnown RBP7.78□□□□□ -1.16
POLR2B-203ENST00000431623 CUL7Q14999 1698 aa7.78□□□□□ -1.16
POLR2B-203ENST00000431623 ABCA5Q8WWZ7 1642 aa7.77□□□□□ -1.16
POLR2B-203ENST00000431623 FGD5Q6ZNL6 1462 aa7.77□□□□□ -1.17
POLR2B-203ENST00000431623 POLA1P09884 1462 aaPredicted RBP7.76□□□□□ -1.17
POLR2B-203ENST00000431623 ERICH3Q5RHP9 1530 aa7.76□□□□□ -1.17
POLR2B-203ENST00000431623 KIF21BO75037 1637 aa7.75□□□□□ -1.17
POLR2B-203ENST00000431623 PHF23Q9BUL5 403 aaPredicted RBP7.74□□□□□ -1.17
POLR2B-203ENST00000431623 KIF27Q86VH2 1401 aa7.74□□□□□ -1.17
POLR2B-203ENST00000431623 PBRM1Q86U86 1689 aa7.72□□□□□ -1.17
POLR2B-203ENST00000431623 TRIM41Q8WV44 630 aa7.71□□□□□ -1.18
POLR2B-203ENST00000431623 SOGA1O94964 1423 aa7.7□□□□□ -1.18
POLR2B-203ENST00000431623 MAGI1Q96QZ7 1491 aaPredicted RBP7.69□□□□□ -1.18
POLR2B-203ENST00000431623 EIF4G3O43432 1585 aaKnown RBP7.68□□□□□ -1.18
POLR2B-203ENST00000431623 GRIN2BQ13224 1484 aa7.68□□□□□ -1.18
POLR2B-203ENST00000431623 ADAMTS12P58397 1594 aa7.67□□□□□ -1.18
POLR2B-203ENST00000431623 GAPVD1Q14C86 1478 aa7.66□□□□□ -1.18
POLR2B-203ENST00000431623 PRXQ9BXM0 1461 aa7.66□□□□□ -1.18
POLR2B-203ENST00000431623 GOLGA3Q08378 1498 aa7.64□□□□□ -1.19
POLR2B-203ENST00000431623 FHAD1B1AJZ9 1412 aa7.64□□□□□ -1.19
POLR2B-203ENST00000431623 CTTNBP2Q8WZ74 1663 aa7.62□□□□□ -1.19
POLR2B-203ENST00000431623 RAPGEF2Q9Y4G8 1499 aa7.62□□□□□ -1.19
POLR2B-203ENST00000431623 RAD54L2Q9Y4B4 1467 aa7.61□□□□□ -1.19
POLR2B-203ENST00000431623 SYNJ2O15056 1496 aa7.6□□□□□ -1.19
POLR2B-203ENST00000431623 EFCAB5A4FU69 1503 aa7.59□□□□□ -1.19
POLR2B-203ENST00000431623 IGF1RP08069 1367 aa7.59□□□□□ -1.19
POLR2B-203ENST00000431623 CSRNP3Q8WYN3 585 aa7.58□□□□□ -1.2
POLR2B-203ENST00000431623 TNIKQ9UKE5 1360 aa7.57□□□□□ -1.2
POLR2B-203ENST00000431623 CARMIL1Q5VZK9 1371 aa7.56□□□□□ -1.2
POLR2B-203ENST00000431623 GRIN2AQ12879 1464 aa7.56□□□□□ -1.2
POLR2B-203ENST00000431623 SNAPC4Q5SXM2 1469 aa7.56□□□□□ -1.2
POLR2B-203ENST00000431623 NUP160Q12769 1436 aa7.55□□□□□ -1.2
POLR2B-203ENST00000431623 ZNF608Q9ULD9 1512 aaPredicted RBP7.55□□□□□ -1.2
POLR2B-203ENST00000431623 RUSC2Q8N2Y8 1516 aa7.54□□□□□ -1.2
POLR2B-203ENST00000431623 UGGT2Q9NYU1 1516 aa7.54□□□□□ -1.2
POLR2B-203ENST00000431623 SHROOM2Q13796 1616 aa7.53□□□□□ -1.2
POLR2B-203ENST00000431623 KIAA0586Q9BVV6 1533 aa7.53□□□□□ -1.2
POLR2B-203ENST00000431623 IQGAP2Q13576 1575 aa7.53□□□□□ -1.2
POLR2B-203ENST00000431623 CHD1O14646 1710 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms