RNA–Protein interactions for RNA: ENST00000580062.5

SNURF-203, Transcript of SNRPN upstream reading frame, humanhuman

TSL 3

Gene SNURF, Length 796 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNURF-203ENST00000580062 NISCHQ9Y2I1 1504 aa33.94■■■■□ 3.02
SNURF-203ENST00000580062 CCDC180Q9P1Z9 1646 aa30.05■■■□□ 2.4
SNURF-203ENST00000580062 ABCC9O60706 1549 aa29.09■■■□□ 2.25
SNURF-203ENST00000580062 DCAF8L2P0C7V8 631 aa28.36■■■□□ 2.13
SNURF-203ENST00000580062 ZCCHC6Q5VYS8 1495 aaKnown RBP28.28■■■□□ 2.12
SNURF-203ENST00000580062 NACADO15069 1562 aa28.2■■■□□ 2.11
SNURF-203ENST00000580062 RB1CC1Q8TDY2 1594 aa28.16■■■□□ 2.1
SNURF-203ENST00000580062 MYO15BQ96JP2 1530 aa28.13■■■□□ 2.09
SNURF-203ENST00000580062 DCAF1Q9Y4B6 1507 aa28.1■■■□□ 2.09
SNURF-203ENST00000580062 UNC13AQ9UPW8 1703 aa27.5■■□□□ 1.99
SNURF-203ENST00000580062 SCRIBQ14160 1630 aa27.39■■□□□ 1.98
SNURF-203ENST00000580062 PABPN1Q86U42 306 aaKnown RBP eCLIP27.27■■□□□ 1.96
SNURF-203ENST00000580062 BICRAQ9NZM4 1560 aa27.22■■□□□ 1.95
SNURF-203ENST00000580062 SHROOM4Q9ULL8 1493 aa27.01■■□□□ 1.91
SNURF-203ENST00000580062 EIF4G1Q04637 1599 aaKnown RBP26.5■■□□□ 1.83
SNURF-203ENST00000580062 DNAJC5BQ9UF47 199 aa26.43■■□□□ 1.82
SNURF-203ENST00000580062 CECR2Q9BXF3 1484 aa26.36■■□□□ 1.81
SNURF-203ENST00000580062 CC2D2AQ9P2K1 1620 aa26.34■■□□□ 1.81
SNURF-203ENST00000580062 BAZ1AQ9NRL2 1556 aaPredicted RBP26.3■■□□□ 1.8
SNURF-203ENST00000580062 SMARCA4P51532 1647 aa26.25■■□□□ 1.79
SNURF-203ENST00000580062 MROH2BQ7Z745 1585 aa26.12■■□□□ 1.77
SNURF-203ENST00000580062 SMARCA2P51531 1590 aa26.06■■□□□ 1.76
SNURF-203ENST00000580062 ATAD2BQ9ULI0 1458 aa26.04■■□□□ 1.76
SNURF-203ENST00000580062 NCAPD3P42695 1498 aa26.01■■□□□ 1.75
SNURF-203ENST00000580062 PEG3Q9GZU2 1588 aa25.99■■□□□ 1.75
SNURF-203ENST00000580062 RSF1Q96T23 1441 aaPredicted RBP25.96■■□□□ 1.75
SNURF-203ENST00000580062 WIZO95785 1651 aa25.89■■□□□ 1.73
SNURF-203ENST00000580062 HMGXB3Q12766 1538 aa25.88■■□□□ 1.73
SNURF-203ENST00000580062 BAZ1BQ9UIG0 1483 aaKnown RBP25.86■■□□□ 1.73
SNURF-203ENST00000580062 TOP2AP11388 1531 aaKnown RBP25.62■■□□□ 1.69
SNURF-203ENST00000580062 SUPT5HO00267 1087 aaKnown RBP25.61■■□□□ 1.69
SNURF-203ENST00000580062 CCDC88BA6NC98 1476 aa25.34■■□□□ 1.65
SNURF-203ENST00000580062 LAMC3Q9Y6N6 1575 aa25.29■■□□□ 1.64
SNURF-203ENST00000580062 CADPSQ9ULU8 1353 aa25.29■■□□□ 1.64
SNURF-203ENST00000580062 NESP48681 1621 aa25.23■■□□□ 1.63
SNURF-203ENST00000580062 CFTRP13569 1480 aa25.16■■□□□ 1.62
SNURF-203ENST00000580062 PDS5BQ9NTI5 1447 aa25.13■■□□□ 1.61
SNURF-203ENST00000580062 ERCC6Q03468 1493 aa25.09■■□□□ 1.61
SNURF-203ENST00000580062 PRDM2Q13029 1718 aa25.03■■□□□ 1.6
SNURF-203ENST00000580062 KIF21AQ7Z4S6 1674 aa24.97■■□□□ 1.59
SNURF-203ENST00000580062 FANCD2Q9BXW9 1451 aa24.96■■□□□ 1.59
SNURF-203ENST00000580062 CEP164Q9UPV0 1460 aa24.91■■□□□ 1.58
SNURF-203ENST00000580062 MRC2Q9UBG0 1479 aa24.8■■□□□ 1.56
SNURF-203ENST00000580062 THOC2Q8NI27 1593 aaKnown RBP24.77■■□□□ 1.56
SNURF-203ENST00000580062 ABCC8Q09428 1581 aa24.71■■□□□ 1.55
SNURF-203ENST00000580062 CUX2O14529 1486 aa24.7■■□□□ 1.55
SNURF-203ENST00000580062 WDR62O43379 1518 aa24.68■■□□□ 1.54
SNURF-203ENST00000580062 URB2Q14146 1524 aaKnown RBP24.66■■□□□ 1.54
SNURF-203ENST00000580062 DNMBPQ6XZF7 1577 aa24.59■■□□□ 1.53
SNURF-203ENST00000580062 TOPBP1Q92547 1522 aa24.59■■□□□ 1.53
SNURF-203ENST00000580062 WRNQ14191 1432 aaPredicted RBP eCLIP24.5■■□□□ 1.51
SNURF-203ENST00000580062 CUX1P39880 1505 aa24.48■■□□□ 1.51
SNURF-203ENST00000580062 TOP2BQ02880 1626 aa24.39■■□□□ 1.5
SNURF-203ENST00000580062 BIVM-ERCC5R4GMW8 1640 aa24.39■■□□□ 1.49
SNURF-203ENST00000580062 POLA1P09884 1462 aaPredicted RBP24.38■■□□□ 1.49
SNURF-203ENST00000580062 IFT140Q96RY7 1462 aa24.38■■□□□ 1.49
SNURF-203ENST00000580062 FGD5Q6ZNL6 1462 aa24.38■■□□□ 1.49
SNURF-203ENST00000580062 SOGA1O94964 1423 aa24.36■■□□□ 1.49
SNURF-203ENST00000580062 SYNJ1O43426 1573 aa24.35■■□□□ 1.49
SNURF-203ENST00000580062 TARBP1Q13395 1621 aaKnown RBP24.28■■□□□ 1.48
SNURF-203ENST00000580062 RAD54L2Q9Y4B4 1467 aa24.28■■□□□ 1.48
SNURF-203ENST00000580062 TRIM41Q8WV44 630 aa24.22■■□□□ 1.47
SNURF-203ENST00000580062 ZNF608Q9ULD9 1512 aaPredicted RBP24.19■■□□□ 1.46
SNURF-203ENST00000580062 ABCA10Q8WWZ4 1543 aa24.17■■□□□ 1.46
SNURF-203ENST00000580062 WDR97A6NE52 1622 aa24.16■■□□□ 1.46
SNURF-203ENST00000580062 TDRD9Q8NDG6 1382 aaKnown RBP24.16■■□□□ 1.46
SNURF-203ENST00000580062 AQRO60306 1485 aaKnown RBP eCLIP24.13■■□□□ 1.451e-6■□□□□ 10.6
SNURF-203ENST00000580062 EIF4G3O43432 1585 aaKnown RBP24.11■■□□□ 1.45
SNURF-203ENST00000580062 CHIC1Q5VXU3 224 aa24.07■■□□□ 1.44
SNURF-203ENST00000580062 GAPVD1Q14C86 1478 aa24.07■■□□□ 1.44
SNURF-203ENST00000580062 GRIN2BQ13224 1484 aa24.01■■□□□ 1.43
SNURF-203ENST00000580062 ABCA5Q8WWZ7 1642 aa24.01■■□□□ 1.43
SNURF-203ENST00000580062 KIF27Q86VH2 1401 aa23.99■■□□□ 1.43
SNURF-203ENST00000580062 PBRM1Q86U86 1689 aa23.97■■□□□ 1.43
SNURF-203ENST00000580062 MAGI1Q96QZ7 1491 aaPredicted RBP23.92■■□□□ 1.42
SNURF-203ENST00000580062 ERICH3Q5RHP9 1530 aa23.9■■□□□ 1.42
SNURF-203ENST00000580062 SNAPC4Q5SXM2 1469 aa23.89■■□□□ 1.42
SNURF-203ENST00000580062 FBLN2P98095 1184 aa23.88■■□□□ 1.41
SNURF-203ENST00000580062 CHMP7Q8WUX9 453 aaPredicted RBP23.87■■□□□ 1.41
SNURF-203ENST00000580062 DNAJC5Q9H3Z4 198 aa23.85■■□□□ 1.41
SNURF-203ENST00000580062 IGF1RP08069 1367 aa23.84■■□□□ 1.41
SNURF-203ENST00000580062 OSCARQ8IYS5 282 aa23.84■■□□□ 1.41
SNURF-203ENST00000580062 SYNJ2O15056 1496 aa23.81■■□□□ 1.4
SNURF-203ENST00000580062 FHAD1B1AJZ9 1412 aa23.8■■□□□ 1.4
SNURF-203ENST00000580062 RUSC2Q8N2Y8 1516 aa23.79■■□□□ 1.4
SNURF-203ENST00000580062 CHD1O14646 1710 aa23.79■■□□□ 1.4
SNURF-203ENST00000580062 CUL7Q14999 1698 aa23.76■■□□□ 1.39
SNURF-203ENST00000580062 EEA1Q15075 1411 aa23.76■■□□□ 1.39
SNURF-203ENST00000580062 ADAMTS12P58397 1594 aa23.75■■□□□ 1.39
SNURF-203ENST00000580062 CARMIL1Q5VZK9 1371 aa23.73■■□□□ 1.39
SNURF-203ENST00000580062 CSRNP3Q8WYN3 585 aa23.71■■□□□ 1.39
SNURF-203ENST00000580062 GRIN2AQ12879 1464 aa23.68■■□□□ 1.38
SNURF-203ENST00000580062 FAM9AQ8IZU1 332 aaPredicted RBP23.66■■□□□ 1.38
SNURF-203ENST00000580062 RAPGEF2Q9Y4G8 1499 aa23.61■■□□□ 1.37
SNURF-203ENST00000580062 PRXQ9BXM0 1461 aa23.56■■□□□ 1.36
SNURF-203ENST00000580062 NUP160Q12769 1436 aa23.55■■□□□ 1.36
SNURF-203ENST00000580062 CEP170Q5SW79 1584 aa23.52■■□□□ 1.36
SNURF-203ENST00000580062 CLASP1Q7Z460 1538 aa23.49■■□□□ 1.35
SNURF-203ENST00000580062 KIAA0586Q9BVV6 1533 aa23.45■■□□□ 1.34
SNURF-203ENST00000580062 JPH4Q96JJ6 628 aa23.43■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms