RNA–Protein interactions for RNA: ENST00000461710.5

CDK5RAP1-207, Transcript of CDK5 regulatory subunit associated protein 1, humanhuman

TSL 2

Gene CDK5RAP1, Length 2,650 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1-207ENST00000461710 NISCHQ9Y2I1 1504 aa22.93■■□□□ 1.26
CDK5RAP1-207ENST00000461710 SHROOM4Q9ULL8 1493 aa19.79■□□□□ 0.76
CDK5RAP1-207ENST00000461710 SUPT5HO00267 1087 aaKnown RBP19.57■□□□□ 0.72
CDK5RAP1-207ENST00000461710 ZCCHC6Q5VYS8 1495 aaKnown RBP19.48■□□□□ 0.71
CDK5RAP1-207ENST00000461710 CCDC180Q9P1Z9 1646 aa19.33■□□□□ 0.69
CDK5RAP1-207ENST00000461710 MYO15BQ96JP2 1530 aa19.3■□□□□ 0.68
CDK5RAP1-207ENST00000461710 HRCP23327 699 aa19.28■□□□□ 0.68
CDK5RAP1-207ENST00000461710 CHIC1Q5VXU3 224 aa19.23■□□□□ 0.67
CDK5RAP1-207ENST00000461710 PCGF6Q9BYE7 350 aa18.99■□□□□ 0.63
CDK5RAP1-207ENST00000461710 DCAF1Q9Y4B6 1507 aa18.87■□□□□ 0.61
CDK5RAP1-207ENST00000461710 DCAF8L2P0C7V8 631 aa18.83■□□□□ 0.61
CDK5RAP1-207ENST00000461710 PPARGC1BQ86YN6 1023 aaKnown RBP18.81■□□□□ 0.6
CDK5RAP1-207ENST00000461710 LOC105371045A0A1W2PR82 267 aa18.67■□□□□ 0.58
CDK5RAP1-207ENST00000461710 TRIM26Q12899 539 aaPredicted RBP18.55■□□□□ 0.56
CDK5RAP1-207ENST00000461710 ABCC9O60706 1549 aa18.47■□□□□ 0.55
CDK5RAP1-207ENST00000461710 ZEB1P37275 1124 aaPredicted RBP18.3■□□□□ 0.52
CDK5RAP1-207ENST00000461710 RSF1Q96T23 1441 aaPredicted RBP18.29■□□□□ 0.52
CDK5RAP1-207ENST00000461710 TRIM41Q8WV44 630 aa18.19■□□□□ 0.5
CDK5RAP1-207ENST00000461710 SCRIBQ14160 1630 aa18.18■□□□□ 0.5
CDK5RAP1-207ENST00000461710 RB1CC1Q8TDY2 1594 aa18.18■□□□□ 0.5
CDK5RAP1-207ENST00000461710 PELP1Q8IZL8 1130 aaKnown RBP18.06■□□□□ 0.48
CDK5RAP1-207ENST00000461710 FAM9AQ8IZU1 332 aaPredicted RBP18.06■□□□□ 0.48
CDK5RAP1-207ENST00000461710 SCAF1Q9H7N4 1312 aaKnown RBP18■□□□□ 0.47
CDK5RAP1-207ENST00000461710 EHMT2Q96KQ7 1210 aa17.89■□□□□ 0.45
CDK5RAP1-207ENST00000461710 CECR2Q9BXF3 1484 aa17.87■□□□□ 0.45
CDK5RAP1-207ENST00000461710 MROH2BQ7Z745 1585 aa17.85■□□□□ 0.45
CDK5RAP1-207ENST00000461710 WIZO95785 1651 aa17.79■□□□□ 0.44
CDK5RAP1-207ENST00000461710 NACADO15069 1562 aa17.77■□□□□ 0.43
CDK5RAP1-207ENST00000461710 EIF4G1Q04637 1599 aaKnown RBP17.75■□□□□ 0.43
CDK5RAP1-207ENST00000461710 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.74■□□□□ 0.43
CDK5RAP1-207ENST00000461710 BAZ1AQ9NRL2 1556 aaPredicted RBP17.71■□□□□ 0.43
CDK5RAP1-207ENST00000461710 CCER1Q8TC90 406 aaPredicted RBP17.7■□□□□ 0.42
CDK5RAP1-207ENST00000461710 ACIN1Q9UKV3 1341 aaKnown RBP17.69■□□□□ 0.42
CDK5RAP1-207ENST00000461710 NEUROD1Q13562 356 aa17.64■□□□□ 0.41
CDK5RAP1-207ENST00000461710 WRNQ14191 1432 aaPredicted RBP eCLIP17.61■□□□□ 0.41
CDK5RAP1-207ENST00000461710 DIEXFQ68CQ4 756 aaKnown RBP17.57■□□□□ 0.4
CDK5RAP1-207ENST00000461710 ABCC8Q09428 1581 aa17.52■□□□□ 0.4
CDK5RAP1-207ENST00000461710 CEP162Q5TB80 1403 aa17.51■□□□□ 0.39
CDK5RAP1-207ENST00000461710 CCDC88BA6NC98 1476 aa17.51■□□□□ 0.39
CDK5RAP1-207ENST00000461710 CENPBP07199 599 aaPredicted RBP17.51■□□□□ 0.39
CDK5RAP1-207ENST00000461710 TOP2AP11388 1531 aaKnown RBP17.5■□□□□ 0.39
CDK5RAP1-207ENST00000461710 GTF3C3Q9Y5Q9 886 aa17.49■□□□□ 0.39
CDK5RAP1-207ENST00000461710 TNIKQ9UKE5 1360 aa17.45■□□□□ 0.38
CDK5RAP1-207ENST00000461710 SMARCA2P51531 1590 aa17.43■□□□□ 0.38
CDK5RAP1-207ENST00000461710 TTBK1Q5TCY1 1321 aaPredicted RBP17.42■□□□□ 0.38
CDK5RAP1-207ENST00000461710 SOGA1O94964 1423 aa17.42■□□□□ 0.38
CDK5RAP1-207ENST00000461710 SMARCA4P51532 1647 aa17.4■□□□□ 0.38
CDK5RAP1-207ENST00000461710 EEA1Q15075 1411 aa17.38■□□□□ 0.37
CDK5RAP1-207ENST00000461710 ZNF316A6NFI3 1004 aaPredicted RBP17.35■□□□□ 0.37
CDK5RAP1-207ENST00000461710 CSRNP3Q8WYN3 585 aa17.32■□□□□ 0.36
CDK5RAP1-207ENST00000461710 RUSC2Q8N2Y8 1516 aa17.32■□□□□ 0.36
CDK5RAP1-207ENST00000461710 GOLGA3Q08378 1498 aa17.28■□□□□ 0.36
CDK5RAP1-207ENST00000461710 UBTFP17480 764 aaKnown RBP17.27■□□□□ 0.35
CDK5RAP1-207ENST00000461710 MYT1Q01538 1121 aa17.25■□□□□ 0.35
CDK5RAP1-207ENST00000461710 UNC13AQ9UPW8 1703 aa17.22■□□□□ 0.35
CDK5RAP1-207ENST00000461710 YTHDC1Q96MU7 727 aaKnown RBP17.16■□□□□ 0.34
CDK5RAP1-207ENST00000461710 KIF21BO75037 1637 aa17.16■□□□□ 0.34
CDK5RAP1-207ENST00000461710 MIER1Q8N108 512 aa17.15■□□□□ 0.34
CDK5RAP1-207ENST00000461710 CEP164Q9UPV0 1460 aa17.15■□□□□ 0.34
CDK5RAP1-207ENST00000461710 HNRNPUL2Q1KMD3 747 aaKnown RBP17.12■□□□□ 0.33
CDK5RAP1-207ENST00000461710 CLIP1P30622 1438 aa17.1■□□□□ 0.33
CDK5RAP1-207ENST00000461710 SYNJ1O43426 1573 aa17.09■□□□□ 0.33
CDK5RAP1-207ENST00000461710 VPS8Q8N3P4 1428 aa17.08■□□□□ 0.33
CDK5RAP1-207ENST00000461710 PEG3Q9GZU2 1588 aa17.05■□□□□ 0.32
CDK5RAP1-207ENST00000461710 BAZ1BQ9UIG0 1483 aaKnown RBP17.04■□□□□ 0.32
CDK5RAP1-207ENST00000461710 RAPGEF2Q9Y4G8 1499 aa16.98■□□□□ 0.31
CDK5RAP1-207ENST00000461710 BICRAQ9NZM4 1560 aa16.95■□□□□ 0.3
CDK5RAP1-207ENST00000461710 APLP2Q06481 763 aa16.95■□□□□ 0.3
CDK5RAP1-207ENST00000461710 CLSPNQ9HAW4 1339 aa16.92■□□□□ 0.3
CDK5RAP1-207ENST00000461710 DHX57Q6P158 1386 aaKnown RBP16.88■□□□□ 0.29
CDK5RAP1-207ENST00000461710 PABPN1Q86U42 306 aaKnown RBP eCLIP16.86■□□□□ 0.294e-8■■■■■ 30
CDK5RAP1-207ENST00000461710 TOP2BQ02880 1626 aa16.84■□□□□ 0.29
CDK5RAP1-207ENST00000461710 ATAD2BQ9ULI0 1458 aa16.84■□□□□ 0.29
CDK5RAP1-207ENST00000461710 RANGAP1P46060 587 aaPredicted RBP16.82■□□□□ 0.28
CDK5RAP1-207ENST00000461710 ERICH3Q5RHP9 1530 aa16.81■□□□□ 0.28
CDK5RAP1-207ENST00000461710 ARAP1Q96P48 1450 aa16.81■□□□□ 0.28
CDK5RAP1-207ENST00000461710 BIVM-ERCC5R4GMW8 1640 aa16.78■□□□□ 0.28
CDK5RAP1-207ENST00000461710 PRXQ9BXM0 1461 aa16.78■□□□□ 0.28
CDK5RAP1-207ENST00000461710 SUPT16HQ9Y5B9 1047 aaKnown RBP16.77■□□□□ 0.28
CDK5RAP1-207ENST00000461710 RRBP1Q9P2E9 1410 aaKnown RBP16.76■□□□□ 0.27
CDK5RAP1-207ENST00000461710 KANK4Q5T7N3 995 aaPredicted RBP16.74■□□□□ 0.27
CDK5RAP1-207ENST00000461710 CUX2O14529 1486 aa16.74■□□□□ 0.27
CDK5RAP1-207ENST00000461710 CCNB3Q8WWL7 1395 aa16.64■□□□□ 0.25
CDK5RAP1-207ENST00000461710 TSHZ2Q9NRE2 1034 aa16.6■□□□□ 0.25
CDK5RAP1-207ENST00000461710 CUX1P39880 1505 aa16.6■□□□□ 0.25
CDK5RAP1-207ENST00000461710 ARHGAP35Q9NRY4 1499 aa16.59■□□□□ 0.25
CDK5RAP1-207ENST00000461710 KIF27Q86VH2 1401 aa16.58■□□□□ 0.24
CDK5RAP1-207ENST00000461710 MAPKBP1O60336 1514 aa16.57■□□□□ 0.24
CDK5RAP1-207ENST00000461710 RAB3GAP2Q9H2M9 1393 aa16.54■□□□□ 0.24
CDK5RAP1-207ENST00000461710 KCNH8Q96L42 1107 aa16.53■□□□□ 0.24
CDK5RAP1-207ENST00000461710 ITGAEP38570 1179 aa16.51■□□□□ 0.23
CDK5RAP1-207ENST00000461710 TIAM1Q13009 1591 aa16.49■□□□□ 0.23
CDK5RAP1-207ENST00000461710 HMGXB3Q12766 1538 aa16.49■□□□□ 0.23
CDK5RAP1-207ENST00000461710 MAP3K1Q13233 1512 aa16.49■□□□□ 0.23
CDK5RAP1-207ENST00000461710 ANP32EQ9BTT0 268 aa16.46■□□□□ 0.23
CDK5RAP1-207ENST00000461710 SETD5Q9C0A6 1442 aa16.45■□□□□ 0.22
CDK5RAP1-207ENST00000461710 WDR97A6NE52 1622 aa16.45■□□□□ 0.22
CDK5RAP1-207ENST00000461710 NCAPD3P42695 1498 aa16.44■□□□□ 0.22
CDK5RAP1-207ENST00000461710 CFTRP13569 1480 aa16.43■□□□□ 0.22
CDK5RAP1-207ENST00000461710 LRRC9Q6ZRR7 1453 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms