RNA–Protein interactions for RNA: ENST00000393062.6

SPIRE2-202, Transcript of spire type actin nucleation factor 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPIRE2, Length 2,172 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIRE2-202ENST00000393062 NISCHQ9Y2I1 1504 aa46.26■■■■■ 5
SPIRE2-202ENST00000393062 CCDC180Q9P1Z9 1646 aa40.28■■■■■ 4.04
SPIRE2-202ENST00000393062 ZCCHC6Q5VYS8 1495 aaKnown RBP38.89■■■■□ 3.82
SPIRE2-202ENST00000393062 SHROOM4Q9ULL8 1493 aa38.65■■■■□ 3.78
SPIRE2-202ENST00000393062 DCAF1Q9Y4B6 1507 aa38.27■■■■□ 3.72
SPIRE2-202ENST00000393062 DCAF8L2P0C7V8 631 aa38.25■■■■□ 3.71
SPIRE2-202ENST00000393062 ABCC9O60706 1549 aa37.97■■■■□ 3.67
SPIRE2-202ENST00000393062 MYO15BQ96JP2 1530 aa37.79■■■■□ 3.64
SPIRE2-202ENST00000393062 SUPT5HO00267 1087 aaKnown RBP37.58■■■■□ 3.61
SPIRE2-202ENST00000393062 NACADO15069 1562 aa37.49■■■■□ 3.59
SPIRE2-202ENST00000393062 RB1CC1Q8TDY2 1594 aa37.13■■■■□ 3.53
SPIRE2-202ENST00000393062 SCRIBQ14160 1630 aa37.03■■■■□ 3.52
SPIRE2-202ENST00000393062 UNC13AQ9UPW8 1703 aa36.4■■■■□ 3.42
SPIRE2-202ENST00000393062 CHIC1Q5VXU3 224 aa36.26■■■■□ 3.4
SPIRE2-202ENST00000393062 RSF1Q96T23 1441 aaPredicted RBP36.14■■■■□ 3.38
SPIRE2-202ENST00000393062 BICRAQ9NZM4 1560 aa36.06■■■■□ 3.36
SPIRE2-202ENST00000393062 CECR2Q9BXF3 1484 aa35.94■■■■□ 3.34
SPIRE2-202ENST00000393062 PABPN1Q86U42 306 aaKnown RBP eCLIP35.82■■■■□ 3.321e-6■■□□□ 12
SPIRE2-202ENST00000393062 MROH2BQ7Z745 1585 aa35.74■■■■□ 3.31
SPIRE2-202ENST00000393062 BAZ1AQ9NRL2 1556 aaPredicted RBP35.7■■■■□ 3.3
SPIRE2-202ENST00000393062 SMARCA4P51532 1647 aa35.53■■■■□ 3.28
SPIRE2-202ENST00000393062 WIZO95785 1651 aa35.51■■■■□ 3.28
SPIRE2-202ENST00000393062 LOC105371045A0A1W2PR82 267 aa35.15■■■■□ 3.22
SPIRE2-202ENST00000393062 PEG3Q9GZU2 1588 aa35.13■■■■□ 3.21
SPIRE2-202ENST00000393062 TOP2AP11388 1531 aaKnown RBP35.09■■■■□ 3.21
SPIRE2-202ENST00000393062 TRIM41Q8WV44 630 aa35.07■■■■□ 3.21
SPIRE2-202ENST00000393062 EIF4G1Q04637 1599 aaKnown RBP34.93■■■■□ 3.18
SPIRE2-202ENST00000393062 ATAD2BQ9ULI0 1458 aa34.93■■■■□ 3.18
SPIRE2-202ENST00000393062 SMARCA2P51531 1590 aa34.89■■■■□ 3.18
SPIRE2-202ENST00000393062 CCDC88BA6NC98 1476 aa34.78■■■■□ 3.16
SPIRE2-202ENST00000393062 FAM9AQ8IZU1 332 aaPredicted RBP34.74■■■■□ 3.15
SPIRE2-202ENST00000393062 BAZ1BQ9UIG0 1483 aaKnown RBP34.71■■■■□ 3.15
SPIRE2-202ENST00000393062 NCAPD3P42695 1498 aa34.62■■■■□ 3.13
SPIRE2-202ENST00000393062 HMGXB3Q12766 1538 aa34.58■■■■□ 3.13
SPIRE2-202ENST00000393062 ABCC8Q09428 1581 aa34.45■■■■□ 3.11
SPIRE2-202ENST00000393062 EHMT2Q96KQ7 1210 aa34.44■■■■□ 3.1
SPIRE2-202ENST00000393062 PCGF6Q9BYE7 350 aa34.39■■■■□ 3.1
SPIRE2-202ENST00000393062 CC2D2AQ9P2K1 1620 aa34.38■■■■□ 3.09
SPIRE2-202ENST00000393062 SOGA1O94964 1423 aa34■■■■□ 3.03
SPIRE2-202ENST00000393062 WRNQ14191 1432 aaPredicted RBP eCLIP33.95■■■■□ 3.02
SPIRE2-202ENST00000393062 HRCP23327 699 aa33.91■■■■□ 3.02
SPIRE2-202ENST00000393062 TRIM26Q12899 539 aaPredicted RBP33.9■■■■□ 3.02
SPIRE2-202ENST00000393062 RUSC2Q8N2Y8 1516 aa33.89■■■■□ 3.02
SPIRE2-202ENST00000393062 CFTRP13569 1480 aa33.88■■■■□ 3.01
SPIRE2-202ENST00000393062 SYNJ1O43426 1573 aa33.83■■■■□ 3.01
SPIRE2-202ENST00000393062 CSRNP3Q8WYN3 585 aa33.73■■■□□ 2.99
SPIRE2-202ENST00000393062 CADPSQ9ULU8 1353 aa33.72■■■□□ 2.99
SPIRE2-202ENST00000393062 PRDM2Q13029 1718 aa33.68■■■□□ 2.98
SPIRE2-202ENST00000393062 EEA1Q15075 1411 aa33.67■■■□□ 2.98
SPIRE2-202ENST00000393062 PPARGC1BQ86YN6 1023 aaKnown RBP33.57■■■□□ 2.96
SPIRE2-202ENST00000393062 TOP2BQ02880 1626 aa33.52■■■□□ 2.96
SPIRE2-202ENST00000393062 DNAJC5BQ9UF47 199 aa33.51■■■□□ 2.95
SPIRE2-202ENST00000393062 TNIKQ9UKE5 1360 aa33.51■■■□□ 2.95
SPIRE2-202ENST00000393062 UBTFP17480 764 aaKnown RBP33.5■■■□□ 2.95
SPIRE2-202ENST00000393062 CEP162Q5TB80 1403 aa33.48■■■□□ 2.95
SPIRE2-202ENST00000393062 BIVM-ERCC5R4GMW8 1640 aa33.48■■■□□ 2.95
SPIRE2-202ENST00000393062 CUX1P39880 1505 aa33.42■■■□□ 2.94
SPIRE2-202ENST00000393062 GOLGA3Q08378 1498 aa33.41■■■□□ 2.94
SPIRE2-202ENST00000393062 LAMC3Q9Y6N6 1575 aa33.4■■■□□ 2.94
SPIRE2-202ENST00000393062 NESP48681 1621 aa33.39■■■□□ 2.94
SPIRE2-202ENST00000393062 FANCD2Q9BXW9 1451 aa33.34■■■□□ 2.93
SPIRE2-202ENST00000393062 CEP164Q9UPV0 1460 aa33.3■■■□□ 2.92
SPIRE2-202ENST00000393062 KIF21BO75037 1637 aa33.27■■■□□ 2.92
SPIRE2-202ENST00000393062 RAPGEF2Q9Y4G8 1499 aa33.2■■■□□ 2.91
SPIRE2-202ENST00000393062 TTBK1Q5TCY1 1321 aaPredicted RBP33.13■■■□□ 2.89
SPIRE2-202ENST00000393062 PDS5BQ9NTI5 1447 aa33.13■■■□□ 2.89
SPIRE2-202ENST00000393062 DNMBPQ6XZF7 1577 aa33.07■■■□□ 2.88
SPIRE2-202ENST00000393062 FGD5Q6ZNL6 1462 aa33.02■■■□□ 2.88
SPIRE2-202ENST00000393062 CLIP1P30622 1438 aa33.01■■■□□ 2.87
SPIRE2-202ENST00000393062 TOPBP1Q92547 1522 aa33■■■□□ 2.87
SPIRE2-202ENST00000393062 RANGAP1P46060 587 aaPredicted RBP33■■■□□ 2.87
SPIRE2-202ENST00000393062 KIF21AQ7Z4S6 1674 aa32.98■■■□□ 2.87
SPIRE2-202ENST00000393062 PRXQ9BXM0 1461 aa32.97■■■□□ 2.87
SPIRE2-202ENST00000393062 KIF27Q86VH2 1401 aa32.95■■■□□ 2.87
SPIRE2-202ENST00000393062 URB2Q14146 1524 aaKnown RBP32.94■■■□□ 2.86
SPIRE2-202ENST00000393062 ERICH3Q5RHP9 1530 aa32.86■■■□□ 2.85
SPIRE2-202ENST00000393062 POLA1P09884 1462 aaPredicted RBP32.86■■■□□ 2.85
SPIRE2-202ENST00000393062 CUX2O14529 1486 aa32.81■■■□□ 2.84
SPIRE2-202ENST00000393062 ZEB1P37275 1124 aaPredicted RBP32.79■■■□□ 2.84
SPIRE2-202ENST00000393062 VPS8Q8N3P4 1428 aa32.78■■■□□ 2.84
SPIRE2-202ENST00000393062 ABCA10Q8WWZ4 1543 aa32.74■■■□□ 2.83
SPIRE2-202ENST00000393062 RAD54L2Q9Y4B4 1467 aa32.73■■■□□ 2.83
SPIRE2-202ENST00000393062 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP32.71■■■□□ 2.83
SPIRE2-202ENST00000393062 MRC2Q9UBG0 1479 aa32.71■■■□□ 2.83
SPIRE2-202ENST00000393062 IGF1RP08069 1367 aa32.7■■■□□ 2.83
SPIRE2-202ENST00000393062 WDR97A6NE52 1622 aa32.63■■■□□ 2.81
SPIRE2-202ENST00000393062 ARAP1Q96P48 1450 aa32.59■■■□□ 2.81
SPIRE2-202ENST00000393062 WDR62O43379 1518 aa32.55■■■□□ 2.8
SPIRE2-202ENST00000393062 APLP2Q06481 763 aa32.55■■■□□ 2.8
SPIRE2-202ENST00000393062 CCER1Q8TC90 406 aaPredicted RBP32.53■■■□□ 2.8
SPIRE2-202ENST00000393062 CARMIL1Q5VZK9 1371 aa32.52■■■□□ 2.8
SPIRE2-202ENST00000393062 ERCC6Q03468 1493 aa32.52■■■□□ 2.8
SPIRE2-202ENST00000393062 TARBP1Q13395 1621 aaKnown RBP32.52■■■□□ 2.8
SPIRE2-202ENST00000393062 ABCA5Q8WWZ7 1642 aa32.47■■■□□ 2.79
SPIRE2-202ENST00000393062 ARHGAP35Q9NRY4 1499 aa32.44■■■□□ 2.78
SPIRE2-202ENST00000393062 THOC2Q8NI27 1593 aaKnown RBP32.43■■■□□ 2.78
SPIRE2-202ENST00000393062 TDRD9Q8NDG6 1382 aaKnown RBP32.4■■■□□ 2.78
SPIRE2-202ENST00000393062 GAPVD1Q14C86 1478 aa32.37■■■□□ 2.77
SPIRE2-202ENST00000393062 CUL7Q14999 1698 aa32.36■■■□□ 2.77
SPIRE2-202ENST00000393062 HNRNPUL2Q1KMD3 747 aaKnown RBP32.34■■■□□ 2.77
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms