RNA–Protein interactions for RNA: ENST00000468209.5

NSMCE4A-206, Transcript of NSE4 homolog A, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE4A, Length 1,041 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE4A-206ENST00000468209 NISCHQ9Y2I1 1504 aa23.13■■□□□ 1.29
NSMCE4A-206ENST00000468209 ABCC9O60706 1549 aa21.59■■□□□ 1.05
NSMCE4A-206ENST00000468209 CCDC180Q9P1Z9 1646 aa21.01■□□□□ 0.95
NSMCE4A-206ENST00000468209 DNAJC5BQ9UF47 199 aa20.77■□□□□ 0.92
NSMCE4A-206ENST00000468209 RB1CC1Q8TDY2 1594 aa20.25■□□□□ 0.83
NSMCE4A-206ENST00000468209 PABPN1Q86U42 306 aaKnown RBP eCLIP20■□□□□ 0.79
NSMCE4A-206ENST00000468209 NACADO15069 1562 aa19.95■□□□□ 0.78
NSMCE4A-206ENST00000468209 UNC13AQ9UPW8 1703 aa19.93■□□□□ 0.78
NSMCE4A-206ENST00000468209 BICRAQ9NZM4 1560 aa19.76■□□□□ 0.75
NSMCE4A-206ENST00000468209 DCAF8L2P0C7V8 631 aa19.72■□□□□ 0.75
NSMCE4A-206ENST00000468209 DNAJC5Q9H3Z4 198 aa19.56■□□□□ 0.72
NSMCE4A-206ENST00000468209 CC2D2AQ9P2K1 1620 aa19.48■□□□□ 0.71
NSMCE4A-206ENST00000468209 CECR2Q9BXF3 1484 aa19.48■□□□□ 0.71
NSMCE4A-206ENST00000468209 MYO15BQ96JP2 1530 aa19.46■□□□□ 0.71
NSMCE4A-206ENST00000468209 SHROOM4Q9ULL8 1493 aa19.3■□□□□ 0.68
NSMCE4A-206ENST00000468209 EIF4G1Q04637 1599 aaKnown RBP19.28■□□□□ 0.68
NSMCE4A-206ENST00000468209 SCRIBQ14160 1630 aa19.17■□□□□ 0.66
NSMCE4A-206ENST00000468209 ZCCHC6Q5VYS8 1495 aaKnown RBP19.06■□□□□ 0.64
NSMCE4A-206ENST00000468209 DCAF1Q9Y4B6 1507 aa19.02■□□□□ 0.64
NSMCE4A-206ENST00000468209 AEBP2Q6ZN18 517 aaPredicted RBP18.8■□□□□ 0.6
NSMCE4A-206ENST00000468209 CUX2O14529 1486 aa18.77■□□□□ 0.6
NSMCE4A-206ENST00000468209 CHIC1Q5VXU3 224 aa18.68■□□□□ 0.58
NSMCE4A-206ENST00000468209 ERCC6Q03468 1493 aa18.64■□□□□ 0.57
NSMCE4A-206ENST00000468209 NCAPD3P42695 1498 aa18.42■□□□□ 0.54
NSMCE4A-206ENST00000468209 NESP48681 1621 aa18.41■□□□□ 0.54
NSMCE4A-206ENST00000468209 TRIM41Q8WV44 630 aa18.36■□□□□ 0.53
NSMCE4A-206ENST00000468209 THOC2Q8NI27 1593 aaKnown RBP18.35■□□□□ 0.53
NSMCE4A-206ENST00000468209 ATAD2BQ9ULI0 1458 aa18.33■□□□□ 0.52
NSMCE4A-206ENST00000468209 HMGXB3Q12766 1538 aa18.26■□□□□ 0.51
NSMCE4A-206ENST00000468209 SMARCA2P51531 1590 aa18.21■□□□□ 0.51
NSMCE4A-206ENST00000468209 SMARCA4P51532 1647 aa18.2■□□□□ 0.5
NSMCE4A-206ENST00000468209 KIF21AQ7Z4S6 1674 aa18.18■□□□□ 0.5
NSMCE4A-206ENST00000468209 LAMC3Q9Y6N6 1575 aa18.12■□□□□ 0.49
NSMCE4A-206ENST00000468209 BAZ1BQ9UIG0 1483 aaKnown RBP18.11■□□□□ 0.49
NSMCE4A-206ENST00000468209 PEG3Q9GZU2 1588 aa17.99■□□□□ 0.47
NSMCE4A-206ENST00000468209 PDS5BQ9NTI5 1447 aa17.98■□□□□ 0.47
NSMCE4A-206ENST00000468209 BAZ1AQ9NRL2 1556 aaPredicted RBP17.96■□□□□ 0.47
NSMCE4A-206ENST00000468209 MRC2Q9UBG0 1479 aa17.93■□□□□ 0.46
NSMCE4A-206ENST00000468209 WDR62O43379 1518 aa17.93■□□□□ 0.46
NSMCE4A-206ENST00000468209 MROH2BQ7Z745 1585 aa17.86■□□□□ 0.45
NSMCE4A-206ENST00000468209 CADPSQ9ULU8 1353 aa17.82■□□□□ 0.44
NSMCE4A-206ENST00000468209 OSCARQ8IYS5 282 aa17.77■□□□□ 0.44
NSMCE4A-206ENST00000468209 RIMBP3CA6NJZ7 1639 aa17.74■□□□□ 0.43
NSMCE4A-206ENST00000468209 RIMBP3BA6NNM3 1639 aa17.74■□□□□ 0.43
NSMCE4A-206ENST00000468209 RIMBP3Q9UFD9 1639 aa17.74■□□□□ 0.43
NSMCE4A-206ENST00000468209 CEP164Q9UPV0 1460 aa17.74■□□□□ 0.43
NSMCE4A-206ENST00000468209 FANCD2Q9BXW9 1451 aa17.67■□□□□ 0.42
NSMCE4A-206ENST00000468209 WIZO95785 1651 aa17.64■□□□□ 0.41
NSMCE4A-206ENST00000468209 URB2Q14146 1524 aaKnown RBP17.61■□□□□ 0.41
NSMCE4A-206ENST00000468209 ARHGEF11O15085 1522 aa17.59■□□□□ 0.41
NSMCE4A-206ENST00000468209 CFTRP13569 1480 aa17.53■□□□□ 0.4
NSMCE4A-206ENST00000468209 ZNF608Q9ULD9 1512 aaPredicted RBP17.49■□□□□ 0.39
NSMCE4A-206ENST00000468209 CYB5RLQ6IPT4 315 aa17.45■□□□□ 0.38
NSMCE4A-206ENST00000468209 TRHP20396 242 aaPredicted RBP17.42■□□□□ 0.38
NSMCE4A-206ENST00000468209 ARAP1Q96P48 1450 aa17.4■□□□□ 0.38
NSMCE4A-206ENST00000468209 PRDM2Q13029 1718 aa17.39■□□□□ 0.37
NSMCE4A-206ENST00000468209 IFT140Q96RY7 1462 aa17.38■□□□□ 0.37
NSMCE4A-206ENST00000468209 CHD1O14646 1710 aa17.38■□□□□ 0.37
NSMCE4A-206ENST00000468209 EIF4G3O43432 1585 aaKnown RBP17.36■□□□□ 0.37
NSMCE4A-206ENST00000468209 TOP2AP11388 1531 aaKnown RBP17.32■□□□□ 0.36
NSMCE4A-206ENST00000468209 TOPBP1Q92547 1522 aa17.29■□□□□ 0.36
NSMCE4A-206ENST00000468209 RSF1Q96T23 1441 aaPredicted RBP17.23■□□□□ 0.35
NSMCE4A-206ENST00000468209 AQRO60306 1485 aaKnown RBP eCLIP17.23■□□□□ 0.355e-9■■□□□ 12.2
NSMCE4A-206ENST00000468209 TARBP1Q13395 1621 aaKnown RBP17.2■□□□□ 0.34
NSMCE4A-206ENST00000468209 FBLN2P98095 1184 aa17.17■□□□□ 0.34
NSMCE4A-206ENST00000468209 DNMBPQ6XZF7 1577 aa17.17■□□□□ 0.34
NSMCE4A-206ENST00000468209 CCDC88BA6NC98 1476 aa17.13■□□□□ 0.33
NSMCE4A-206ENST00000468209 CLASP1Q7Z460 1538 aa17.11■□□□□ 0.33
NSMCE4A-206ENST00000468209 ABCC8Q09428 1581 aa17.11■□□□□ 0.33
NSMCE4A-206ENST00000468209 POLA1P09884 1462 aaPredicted RBP17.07■□□□□ 0.32
NSMCE4A-206ENST00000468209 ILDR1Q86SU0 546 aaPredicted RBP17.07■□□□□ 0.32
NSMCE4A-206ENST00000468209 SNAPC4Q5SXM2 1469 aa17.05■□□□□ 0.32
NSMCE4A-206ENST00000468209 RAD54L2Q9Y4B4 1467 aa17.05■□□□□ 0.32
NSMCE4A-206ENST00000468209 TDRD9Q8NDG6 1382 aaKnown RBP17.02■□□□□ 0.31
NSMCE4A-206ENST00000468209 SYNJ1O43426 1573 aa17.01■□□□□ 0.31
NSMCE4A-206ENST00000468209 SOGA1O94964 1423 aa16.94■□□□□ 0.3
NSMCE4A-206ENST00000468209 GAPVD1Q14C86 1478 aa16.93■□□□□ 0.3
NSMCE4A-206ENST00000468209 CHMP7Q8WUX9 453 aaPredicted RBP16.92■□□□□ 0.3
NSMCE4A-206ENST00000468209 MAGI1Q96QZ7 1491 aaPredicted RBP16.92■□□□□ 0.3
NSMCE4A-206ENST00000468209 WDR97A6NE52 1622 aa16.91■□□□□ 0.3
NSMCE4A-206ENST00000468209 FGD5Q6ZNL6 1462 aa16.89■□□□□ 0.29
NSMCE4A-206ENST00000468209 SYNJ2O15056 1496 aa16.88■□□□□ 0.29
NSMCE4A-206ENST00000468209 GRIN2BQ13224 1484 aa16.86■□□□□ 0.29
NSMCE4A-206ENST00000468209 ERCC6L2Q5T890 1561 aa16.86■□□□□ 0.29
NSMCE4A-206ENST00000468209 PBRM1Q86U86 1689 aa16.85■□□□□ 0.29
NSMCE4A-206ENST00000468209 CUX1P39880 1505 aa16.81■□□□□ 0.28
NSMCE4A-206ENST00000468209 KIF13AQ9H1H9 1805 aa16.81■□□□□ 0.28
NSMCE4A-206ENST00000468209 CEP170Q5SW79 1584 aa16.72■□□□□ 0.27
NSMCE4A-206ENST00000468209 ABCA5Q8WWZ7 1642 aa16.72■□□□□ 0.27
NSMCE4A-206ENST00000468209 GRIN2AQ12879 1464 aa16.67■□□□□ 0.26
NSMCE4A-206ENST00000468209 SHROOM2Q13796 1616 aa16.67■□□□□ 0.26
NSMCE4A-206ENST00000468209 PHF23Q9BUL5 403 aaPredicted RBP16.64■□□□□ 0.25
NSMCE4A-206ENST00000468209 ABCA10Q8WWZ4 1543 aa16.64■□□□□ 0.25
NSMCE4A-206ENST00000468209 ADAMTS12P58397 1594 aa16.64■□□□□ 0.25
NSMCE4A-206ENST00000468209 NUP160Q12769 1436 aa16.63■□□□□ 0.25
NSMCE4A-206ENST00000468209 KDM4FA0A1W2PPD8 638 aa16.61■□□□□ 0.25
NSMCE4A-206ENST00000468209 ABCC10Q5T3U5 1492 aa16.55■□□□□ 0.24
NSMCE4A-206ENST00000468209 DIP2BQ9P265 1576 aa16.55■□□□□ 0.24
NSMCE4A-206ENST00000468209 FAM69CQ0P6D2 419 aa16.54■□□□□ 0.24
NSMCE4A-206ENST00000468209 KDM6BO15054 1643 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms