RNA–Protein interactions for RNA: ENST00000489266.5

NSMCE4A-211, Transcript of NSE4 homolog A, SMC5-SMC6 complex component, humanhuman

TSL 1 (best)

Gene NSMCE4A, Length 2,399 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE4A-211ENST00000489266 NISCHQ9Y2I1 1504 aa39.87■■■■□ 3.97
NSMCE4A-211ENST00000489266 HRCP23327 699 aa36.29■■■■□ 3.4
NSMCE4A-211ENST00000489266 PELP1Q8IZL8 1130 aaKnown RBP35.88■■■■□ 3.33
NSMCE4A-211ENST00000489266 PPARGC1BQ86YN6 1023 aaKnown RBP35.32■■■■□ 3.25
NSMCE4A-211ENST00000489266 PCGF6Q9BYE7 350 aa35.12■■■■□ 3.21
NSMCE4A-211ENST00000489266 MYO15BQ96JP2 1530 aa34.85■■■■□ 3.17
NSMCE4A-211ENST00000489266 SHROOM4Q9ULL8 1493 aa34.76■■■■□ 3.15
NSMCE4A-211ENST00000489266 SUPT5HO00267 1087 aaKnown RBP34.76■■■■□ 3.15
NSMCE4A-211ENST00000489266 MYT1Q01538 1121 aa34.69■■■■□ 3.14
NSMCE4A-211ENST00000489266 SCAF1Q9H7N4 1312 aaKnown RBP34.56■■■■□ 3.12
NSMCE4A-211ENST00000489266 CHIC1Q5VXU3 224 aa34.5■■■■□ 3.11
NSMCE4A-211ENST00000489266 DCAF1Q9Y4B6 1507 aa34.39■■■■□ 3.1
NSMCE4A-211ENST00000489266 CCDC180Q9P1Z9 1646 aa34.17■■■■□ 3.06
NSMCE4A-211ENST00000489266 TRIM26Q12899 539 aaPredicted RBP34■■■■□ 3.03
NSMCE4A-211ENST00000489266 ZEB1P37275 1124 aaPredicted RBP33.97■■■■□ 3.03
NSMCE4A-211ENST00000489266 ZCCHC6Q5VYS8 1495 aaKnown RBP33.74■■■□□ 2.99
NSMCE4A-211ENST00000489266 ACIN1Q9UKV3 1341 aaKnown RBP33.59■■■□□ 2.97
NSMCE4A-211ENST00000489266 LOC105371045A0A1W2PR82 267 aa33.56■■■□□ 2.96
NSMCE4A-211ENST00000489266 NEUROD1Q13562 356 aa33.41■■■□□ 2.94
NSMCE4A-211ENST00000489266 GTF3C3Q9Y5Q9 886 aa33.26■■■□□ 2.92
NSMCE4A-211ENST00000489266 CENPBP07199 599 aaPredicted RBP33.07■■■□□ 2.89
NSMCE4A-211ENST00000489266 DCAF8L2P0C7V8 631 aa32.94■■■□□ 2.86
NSMCE4A-211ENST00000489266 TTBK1Q5TCY1 1321 aaPredicted RBP32.73■■■□□ 2.83
NSMCE4A-211ENST00000489266 DIEXFQ68CQ4 756 aaKnown RBP32.69■■■□□ 2.82
NSMCE4A-211ENST00000489266 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP32.36■■■□□ 2.77
NSMCE4A-211ENST00000489266 CCER1Q8TC90 406 aaPredicted RBP32.35■■■□□ 2.77
NSMCE4A-211ENST00000489266 TRIM41Q8WV44 630 aa32.27■■■□□ 2.76
NSMCE4A-211ENST00000489266 BCL11AQ9H165 835 aa32.22■■■□□ 2.75
NSMCE4A-211ENST00000489266 ABCC9O60706 1549 aa32.09■■■□□ 2.73
NSMCE4A-211ENST00000489266 FAM9AQ8IZU1 332 aaPredicted RBP32.06■■■□□ 2.72
NSMCE4A-211ENST00000489266 YTHDC1Q96MU7 727 aaKnown RBP32.05■■■□□ 2.72
NSMCE4A-211ENST00000489266 ZNF316A6NFI3 1004 aaPredicted RBP31.97■■■□□ 2.71
NSMCE4A-211ENST00000489266 ANP32EQ9BTT0 268 aa31.97■■■□□ 2.71
NSMCE4A-211ENST00000489266 RSF1Q96T23 1441 aaPredicted RBP31.88■■■□□ 2.69
NSMCE4A-211ENST00000489266 MIER1Q8N108 512 aa31.78■■■□□ 2.68
NSMCE4A-211ENST00000489266 SCRIBQ14160 1630 aa31.77■■■□□ 2.68
NSMCE4A-211ENST00000489266 RB1CC1Q8TDY2 1594 aa31.74■■■□□ 2.67
NSMCE4A-211ENST00000489266 EHMT2Q96KQ7 1210 aa31.73■■■□□ 2.67
NSMCE4A-211ENST00000489266 CLSPNQ9HAW4 1339 aa31.7■■■□□ 2.67
NSMCE4A-211ENST00000489266 NACADO15069 1562 aa31.7■■■□□ 2.66
NSMCE4A-211ENST00000489266 TSHZ2Q9NRE2 1034 aa31.61■■■□□ 2.65
NSMCE4A-211ENST00000489266 SUPT16HQ9Y5B9 1047 aaKnown RBP31.6■■■□□ 2.65
NSMCE4A-211ENST00000489266 CSRNP3Q8WYN3 585 aa31.57■■■□□ 2.64
NSMCE4A-211ENST00000489266 WRNQ14191 1432 aaPredicted RBP eCLIP31.48■■■□□ 2.63
NSMCE4A-211ENST00000489266 PRKCSHP14314 528 aaPredicted RBP31.27■■■□□ 2.6
NSMCE4A-211ENST00000489266 CEP162Q5TB80 1403 aa31.08■■■□□ 2.57
NSMCE4A-211ENST00000489266 CECR2Q9BXF3 1484 aa31.03■■■□□ 2.56
NSMCE4A-211ENST00000489266 TNIKQ9UKE5 1360 aa30.96■■■□□ 2.55
NSMCE4A-211ENST00000489266 EIF4G1Q04637 1599 aaKnown RBP30.94■■■□□ 2.54
NSMCE4A-211ENST00000489266 MROH2BQ7Z745 1585 aa30.91■■■□□ 2.54
NSMCE4A-211ENST00000489266 RBM19Q9Y4C8 960 aaKnown RBP30.8■■■□□ 2.52
NSMCE4A-211ENST00000489266 WIZO95785 1651 aa30.75■■■□□ 2.51
NSMCE4A-211ENST00000489266 CCDC88BA6NC98 1476 aa30.69■■■□□ 2.5
NSMCE4A-211ENST00000489266 HNRNPUL2Q1KMD3 747 aaKnown RBP30.69■■■□□ 2.5
NSMCE4A-211ENST00000489266 ERICH6Q7L0X2 663 aa30.69■■■□□ 2.5
NSMCE4A-211ENST00000489266 BAZ1AQ9NRL2 1556 aaPredicted RBP30.68■■■□□ 2.5
NSMCE4A-211ENST00000489266 BCANQ96GW7 911 aa30.68■■■□□ 2.5
NSMCE4A-211ENST00000489266 UNC13AQ9UPW8 1703 aa30.66■■■□□ 2.5
NSMCE4A-211ENST00000489266 EEA1Q15075 1411 aa30.65■■■□□ 2.5
NSMCE4A-211ENST00000489266 ABCC8Q09428 1581 aa30.59■■■□□ 2.49
NSMCE4A-211ENST00000489266 MSH5O43196 834 aa30.58■■■□□ 2.49
NSMCE4A-211ENST00000489266 FKBP8Q14318 412 aa30.58■■■□□ 2.49
NSMCE4A-211ENST00000489266 SOGA1O94964 1423 aa30.58■■■□□ 2.49
NSMCE4A-211ENST00000489266 UBTFP17480 764 aaKnown RBP30.55■■■□□ 2.48
NSMCE4A-211ENST00000489266 GOLGA3Q08378 1498 aa30.5■■■□□ 2.47
NSMCE4A-211ENST00000489266 SMARCA4P51532 1647 aa30.42■■■□□ 2.46
NSMCE4A-211ENST00000489266 FANCIQ9NVI1 1328 aa30.38■■■□□ 2.45
NSMCE4A-211ENST00000489266 KCNH8Q96L42 1107 aa30.37■■■□□ 2.45
NSMCE4A-211ENST00000489266 MYT1LQ9UL68 1186 aa30.37■■■□□ 2.45
NSMCE4A-211ENST00000489266 RUSC2Q8N2Y8 1516 aa30.36■■■□□ 2.45
NSMCE4A-211ENST00000489266 DHX57Q6P158 1386 aaKnown RBP30.33■■■□□ 2.45
NSMCE4A-211ENST00000489266 NEFLP07196 543 aa30.32■■■□□ 2.44
NSMCE4A-211ENST00000489266 BICRAQ9NZM4 1560 aa30.32■■■□□ 2.44
NSMCE4A-211ENST00000489266 APLP2Q06481 763 aa30.3■■■□□ 2.44
NSMCE4A-211ENST00000489266 TOP2AP11388 1531 aaKnown RBP30.3■■■□□ 2.44
NSMCE4A-211ENST00000489266 VPS8Q8N3P4 1428 aa30.27■■■□□ 2.44
NSMCE4A-211ENST00000489266 ITGAEP38570 1179 aa30.24■■■□□ 2.43
NSMCE4A-211ENST00000489266 PABPN1Q86U42 306 aaKnown RBP eCLIP30.24■■■□□ 2.43
NSMCE4A-211ENST00000489266 CLIP1P30622 1438 aa30.23■■■□□ 2.43
NSMCE4A-211ENST00000489266 DEKP35659 375 aaKnown RBP30.19■■■□□ 2.42
NSMCE4A-211ENST00000489266 CEP164Q9UPV0 1460 aa30.18■■■□□ 2.42
NSMCE4A-211ENST00000489266 SMARCA2P51531 1590 aa30.16■■■□□ 2.42
NSMCE4A-211ENST00000489266 KIF21BO75037 1637 aa30.15■■■□□ 2.42
NSMCE4A-211ENST00000489266 ANO8Q9HCE9 1232 aaPredicted RBP30.11■■■□□ 2.41
NSMCE4A-211ENST00000489266 BAZ1BQ9UIG0 1483 aaKnown RBP30.01■■■□□ 2.39
NSMCE4A-211ENST00000489266 PEG3Q9GZU2 1588 aa29.98■■■□□ 2.39
NSMCE4A-211ENST00000489266 CDK11AQ9UQ88 783 aaPredicted RBP29.97■■■□□ 2.39
NSMCE4A-211ENST00000489266 ERICH6BQ5W0A0 696 aa29.92■■■□□ 2.38
NSMCE4A-211ENST00000489266 CUX2O14529 1486 aa29.9■■■□□ 2.38
NSMCE4A-211ENST00000489266 TRIM52Q96A61 297 aa29.86■■■□□ 2.37
NSMCE4A-211ENST00000489266 CCER2I3L3R5 266 aa29.83■■■□□ 2.37
NSMCE4A-211ENST00000489266 DDX10Q13206 875 aaKnown RBP29.82■■■□□ 2.36
NSMCE4A-211ENST00000489266 SALL2Q9Y467 1007 aaPredicted RBP29.81■■■□□ 2.36
NSMCE4A-211ENST00000489266 RRBP1Q9P2E9 1410 aaKnown RBP29.8■■■□□ 2.36
NSMCE4A-211ENST00000489266 RAPGEF2Q9Y4G8 1499 aa29.76■■■□□ 2.35
NSMCE4A-211ENST00000489266 ATAD2BQ9ULI0 1458 aa29.75■■■□□ 2.35
NSMCE4A-211ENST00000489266 PPP1R15AO75807 674 aaPredicted RBP29.74■■■□□ 2.35
NSMCE4A-211ENST00000489266 SYNJ1O43426 1573 aa29.68■■■□□ 2.34
NSMCE4A-211ENST00000489266 NOP58Q9Y2X3 529 aaKnown RBP29.64■■■□□ 2.34
NSMCE4A-211ENST00000489266 KANK4Q5T7N3 995 aaPredicted RBP29.63■■■□□ 2.33
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms