RNA–Protein interactions for RNA: ENST00000507854.1

ABCA11P-203, Transcript of ATP binding cassette subfamily A member 11, pseudogene, humanhuman

TSL 1 (best)

Gene ABCA11P, Length 1,503 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA11P-203ENST00000507854 NISCHQ9Y2I1 1504 aa23.61■■□□□ 1.37
ABCA11P-203ENST00000507854 AEBP2Q6ZN18 517 aaPredicted RBP21.7■■□□□ 1.07
ABCA11P-203ENST00000507854 CCDC180Q9P1Z9 1646 aa20.51■□□□□ 0.87
ABCA11P-203ENST00000507854 CHIC1Q5VXU3 224 aa20.45■□□□□ 0.86
ABCA11P-203ENST00000507854 ZCCHC6Q5VYS8 1495 aaKnown RBP19.85■□□□□ 0.77
ABCA11P-203ENST00000507854 DCAF1Q9Y4B6 1507 aa19.59■□□□□ 0.73
ABCA11P-203ENST00000507854 DCAF8L2P0C7V8 631 aa19.46■□□□□ 0.71
ABCA11P-203ENST00000507854 MYO15BQ96JP2 1530 aa19.33■□□□□ 0.69
ABCA11P-203ENST00000507854 SHROOM4Q9ULL8 1493 aa19.27■□□□□ 0.68
ABCA11P-203ENST00000507854 ABCC9O60706 1549 aa19.22■□□□□ 0.67
ABCA11P-203ENST00000507854 NACADO15069 1562 aa19.13■□□□□ 0.65
ABCA11P-203ENST00000507854 RB1CC1Q8TDY2 1594 aa18.9■□□□□ 0.62
ABCA11P-203ENST00000507854 SENP3Q9H4L4 574 aaPredicted RBP18.82■□□□□ 0.6
ABCA11P-203ENST00000507854 SCRIBQ14160 1630 aa18.8■□□□□ 0.6
ABCA11P-203ENST00000507854 SUPT5HO00267 1087 aaKnown RBP18.69■□□□□ 0.58
ABCA11P-203ENST00000507854 RSF1Q96T23 1441 aaPredicted RBP18.37■□□□□ 0.53
ABCA11P-203ENST00000507854 PHF23Q9BUL5 403 aaPredicted RBP18.37■□□□□ 0.53
ABCA11P-203ENST00000507854 UNC13AQ9UPW8 1703 aa18.32■□□□□ 0.52
ABCA11P-203ENST00000507854 CECR2Q9BXF3 1484 aa18.26■□□□□ 0.51
ABCA11P-203ENST00000507854 BAZ1AQ9NRL2 1556 aaPredicted RBP18.25■□□□□ 0.51
ABCA11P-203ENST00000507854 BICRAQ9NZM4 1560 aa18.23■□□□□ 0.51
ABCA11P-203ENST00000507854 MROH2BQ7Z745 1585 aa18.19■□□□□ 0.5
ABCA11P-203ENST00000507854 PABPN1Q86U42 306 aaKnown RBP eCLIP18.17■□□□□ 0.5
ABCA11P-203ENST00000507854 SMARCA4P51532 1647 aa18.07■□□□□ 0.48
ABCA11P-203ENST00000507854 WIZO95785 1651 aa18■□□□□ 0.47
ABCA11P-203ENST00000507854 POTEDQ86YR6 584 aa17.93■□□□□ 0.46
ABCA11P-203ENST00000507854 TOP2AP11388 1531 aaKnown RBP17.92■□□□□ 0.46
ABCA11P-203ENST00000507854 PEG3Q9GZU2 1588 aa17.9■□□□□ 0.46
ABCA11P-203ENST00000507854 SMARCA2P51531 1590 aa17.83■□□□□ 0.44
ABCA11P-203ENST00000507854 ATAD2BQ9ULI0 1458 aa17.79■□□□□ 0.44
ABCA11P-203ENST00000507854 CCDC88BA6NC98 1476 aa17.72■□□□□ 0.43
ABCA11P-203ENST00000507854 BAZ1BQ9UIG0 1483 aaKnown RBP17.71■□□□□ 0.43
ABCA11P-203ENST00000507854 EIF4G1Q04637 1599 aaKnown RBP17.71■□□□□ 0.43
ABCA11P-203ENST00000507854 NCAPD3P42695 1498 aa17.66■□□□□ 0.42
ABCA11P-203ENST00000507854 TRIM41Q8WV44 630 aa17.64■□□□□ 0.41
ABCA11P-203ENST00000507854 HMGXB3Q12766 1538 aa17.61■□□□□ 0.41
ABCA11P-203ENST00000507854 FOXD1Q16676 465 aa17.52■□□□□ 0.4
ABCA11P-203ENST00000507854 CC2D2AQ9P2K1 1620 aa17.38■□□□□ 0.37
ABCA11P-203ENST00000507854 WRNQ14191 1432 aaPredicted RBP eCLIP17.32■□□□□ 0.36
ABCA11P-203ENST00000507854 ABCC8Q09428 1581 aa17.31■□□□□ 0.36
ABCA11P-203ENST00000507854 CFTRP13569 1480 aa17.29■□□□□ 0.36
ABCA11P-203ENST00000507854 LOC105371045A0A1W2PR82 267 aa17.25■□□□□ 0.35
ABCA11P-203ENST00000507854 EEA1Q15075 1411 aa17.24■□□□□ 0.35
ABCA11P-203ENST00000507854 CADPSQ9ULU8 1353 aa17.22■□□□□ 0.35
ABCA11P-203ENST00000507854 FAM9AQ8IZU1 332 aaPredicted RBP17.21■□□□□ 0.35
ABCA11P-203ENST00000507854 SYNJ1O43426 1573 aa17.13■□□□□ 0.33
ABCA11P-203ENST00000507854 TOP2BQ02880 1626 aa17.11■□□□□ 0.33
ABCA11P-203ENST00000507854 PRDM2Q13029 1718 aa17.09■□□□□ 0.33
ABCA11P-203ENST00000507854 CSRNP3Q8WYN3 585 aa17.08■□□□□ 0.32
ABCA11P-203ENST00000507854 SOGA1O94964 1423 aa17.08■□□□□ 0.32
ABCA11P-203ENST00000507854 BIVM-ERCC5R4GMW8 1640 aa17.07■□□□□ 0.32
ABCA11P-203ENST00000507854 LAMC3Q9Y6N6 1575 aa17.01■□□□□ 0.31
ABCA11P-203ENST00000507854 CUX1P39880 1505 aa17.01■□□□□ 0.31
ABCA11P-203ENST00000507854 FANCD2Q9BXW9 1451 aa16.99■□□□□ 0.31
ABCA11P-203ENST00000507854 RUSC2Q8N2Y8 1516 aa16.95■□□□□ 0.3
ABCA11P-203ENST00000507854 CEP164Q9UPV0 1460 aa16.94■□□□□ 0.3
ABCA11P-203ENST00000507854 PDS5BQ9NTI5 1447 aa16.94■□□□□ 0.3
ABCA11P-203ENST00000507854 GOLGA3Q08378 1498 aa16.93■□□□□ 0.3
ABCA11P-203ENST00000507854 TNIKQ9UKE5 1360 aa16.93■□□□□ 0.3
ABCA11P-203ENST00000507854 KIF27Q86VH2 1401 aa16.91■□□□□ 0.3
ABCA11P-203ENST00000507854 EHMT2Q96KQ7 1210 aa16.9■□□□□ 0.3
ABCA11P-203ENST00000507854 KIF21BO75037 1637 aa16.89■□□□□ 0.29
ABCA11P-203ENST00000507854 NESP48681 1621 aa16.88■□□□□ 0.29
ABCA11P-203ENST00000507854 MSH5O43196 834 aa16.87■□□□□ 0.29
ABCA11P-203ENST00000507854 UBTFP17480 764 aaKnown RBP16.87■□□□□ 0.29
ABCA11P-203ENST00000507854 DNMBPQ6XZF7 1577 aa16.85■□□□□ 0.29
ABCA11P-203ENST00000507854 FGD5Q6ZNL6 1462 aa16.82■□□□□ 0.28
ABCA11P-203ENST00000507854 DNAJC5BQ9UF47 199 aa16.81■□□□□ 0.28
ABCA11P-203ENST00000507854 TOPBP1Q92547 1522 aa16.8■□□□□ 0.28
ABCA11P-203ENST00000507854 CEP162Q5TB80 1403 aa16.79■□□□□ 0.28
ABCA11P-203ENST00000507854 PRXQ9BXM0 1461 aa16.79■□□□□ 0.28
ABCA11P-203ENST00000507854 ERICH3Q5RHP9 1530 aa16.78■□□□□ 0.28
ABCA11P-203ENST00000507854 CUX2O14529 1486 aa16.77■□□□□ 0.27
ABCA11P-203ENST00000507854 RAPGEF2Q9Y4G8 1499 aa16.74■□□□□ 0.27
ABCA11P-203ENST00000507854 POLA1P09884 1462 aaPredicted RBP16.73■□□□□ 0.27
ABCA11P-203ENST00000507854 TRIM26Q12899 539 aaPredicted RBP16.72■□□□□ 0.27
ABCA11P-203ENST00000507854 ABCA10Q8WWZ4 1543 aa16.72■□□□□ 0.27
ABCA11P-203ENST00000507854 URB2Q14146 1524 aaKnown RBP16.71■□□□□ 0.27
ABCA11P-203ENST00000507854 IGF1RP08069 1367 aa16.71■□□□□ 0.27
ABCA11P-203ENST00000507854 PCGF6Q9BYE7 350 aa16.66■□□□□ 0.26
ABCA11P-203ENST00000507854 CLIP1P30622 1438 aa16.66■□□□□ 0.26
ABCA11P-203ENST00000507854 CARMIL1Q5VZK9 1371 aa16.64■□□□□ 0.26
ABCA11P-203ENST00000507854 MRC2Q9UBG0 1479 aa16.64■□□□□ 0.25
ABCA11P-203ENST00000507854 KIF21AQ7Z4S6 1674 aa16.64■□□□□ 0.25
ABCA11P-203ENST00000507854 RAD54L2Q9Y4B4 1467 aa16.64■□□□□ 0.25
ABCA11P-203ENST00000507854 ERCC6Q03468 1493 aa16.54■□□□□ 0.24
ABCA11P-203ENST00000507854 CUL7Q14999 1698 aa16.54■□□□□ 0.24
ABCA11P-203ENST00000507854 VPS8Q8N3P4 1428 aa16.54■□□□□ 0.24
ABCA11P-203ENST00000507854 WDR97A6NE52 1622 aa16.54■□□□□ 0.24
ABCA11P-203ENST00000507854 GAPVD1Q14C86 1478 aa16.54■□□□□ 0.24
ABCA11P-203ENST00000507854 WDR62O43379 1518 aa16.52■□□□□ 0.24
ABCA11P-203ENST00000507854 TDRD9Q8NDG6 1382 aaKnown RBP16.51■□□□□ 0.23
ABCA11P-203ENST00000507854 ABCA5Q8WWZ7 1642 aa16.5■□□□□ 0.23
ABCA11P-203ENST00000507854 IFT140Q96RY7 1462 aa16.5■□□□□ 0.23
ABCA11P-203ENST00000507854 TARBP1Q13395 1621 aaKnown RBP16.49■□□□□ 0.23
ABCA11P-203ENST00000507854 APLP2Q06481 763 aa16.49■□□□□ 0.23
ABCA11P-203ENST00000507854 RANGAP1P46060 587 aaPredicted RBP16.43■□□□□ 0.22
ABCA11P-203ENST00000507854 GRIN2BQ13224 1484 aa16.41■□□□□ 0.22
ABCA11P-203ENST00000507854 ARAP1Q96P48 1450 aa16.41■□□□□ 0.22
ABCA11P-203ENST00000507854 ARHGAP35Q9NRY4 1499 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms