Protein–RNA interactions for Protein: Q9H0D6

XRN2, 5'-3' exoribonuclease 2, humanhuman

Known RBP eCLIP

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN2Q9H0D6 SPPL3-207ENST00000543608 636 ntTSL 319.69■□□□□ 0.749e-6■■■■■ 32.4
XRN2Q9H0D6 DDR1-250ENST00000503628 570 ntTSL 419.68■□□□□ 0.749e-6■■■■■ 32.4
XRN2Q9H0D6 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.749e-6■■■■■ 32.4
XRN2Q9H0D6 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC19.67■□□□□ 0.749e-6■■■■■ 32.4
XRN2Q9H0D6 QTRT1-204ENST00000587500 540 ntTSL 219.65■□□□□ 0.741e-10■■■■■ 32.4
XRN2Q9H0D6 DDR1-268ENST00000512694 623 ntTSL 419.63■□□□□ 0.739e-6■■■■■ 32.4
XRN2Q9H0D6 TOX4-204ENST00000455138 549 ntTSL 419.61■□□□□ 0.739e-6■■■■■ 32.4
XRN2Q9H0D6 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC19.56■□□□□ 0.724e-8■■■■■ 32.4
XRN2Q9H0D6 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.729e-6■■■■■ 32.4
XRN2Q9H0D6 TOX4-201ENST00000416256 724 ntTSL 519.55■□□□□ 0.729e-6■■■■■ 32.4
XRN2Q9H0D6 UNC119-207ENST00000578434 556 ntTSL 419.53■□□□□ 0.729e-6■■■■■ 32.4
XRN2Q9H0D6 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.719e-6■■■■■ 32.4
XRN2Q9H0D6 SLC41A3-215ENST00000512470 726 ntTSL 319.47■□□□□ 0.719e-6■■■■■ 32.4
XRN2Q9H0D6 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.694e-7■■■■■ 32.4
XRN2Q9H0D6 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC19.33■□□□□ 0.699e-6■■■■■ 32.4
XRN2Q9H0D6 CANT1-215ENST00000592887 555 ntTSL 419.31■□□□□ 0.689e-6■■■■■ 32.4
XRN2Q9H0D6 SBF1-205ENST00000470434 2139 ntTSL 519.3■□□□□ 0.689e-6■■■■■ 32.4
XRN2Q9H0D6 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC19.3■□□□□ 0.689e-6■■■■■ 32.4
XRN2Q9H0D6 SLC41A3-209ENST00000507008 692 ntTSL 319.28■□□□□ 0.689e-6■■■■■ 32.4
XRN2Q9H0D6 NHP2-204ENST00000510363 566 ntTSL 1 (best)19.27■□□□□ 0.689e-6■■■■■ 32.4
XRN2Q9H0D6 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC19.23■□□□□ 0.679e-6■■■■■ 32.4
XRN2Q9H0D6 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC19.22■□□□□ 0.679e-6■■■■■ 32.4
XRN2Q9H0D6 MYL5-204ENST00000503612 531 ntTSL 219.16■□□□□ 0.669e-6■■■■■ 32.4
XRN2Q9H0D6 ADIPOR1-204ENST00000426229 879 ntTSL 219.15■□□□□ 0.669e-6■■■■■ 32.4
XRN2Q9H0D6 LMNB2-203ENST00000490554 689 ntTSL 219.14■□□□□ 0.659e-6■■■■■ 32.4
XRN2Q9H0D6 SLC41A3-221ENST00000514677 986 ntTSL 1 (best)19.11■□□□□ 0.659e-6■■■■■ 32.4
XRN2Q9H0D6 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.659e-6■■■■■ 32.4
XRN2Q9H0D6 DDR1-230ENST00000412274 496 ntTSL 219.09■□□□□ 0.659e-6■■■■■ 32.4
XRN2Q9H0D6 SHKBP1-224ENST00000600718 1993 ntTSL 519.01■□□□□ 0.639e-6■■■■■ 32.4
XRN2Q9H0D6 DDR1-261ENST00000507901 562 ntTSL 418.99■□□□□ 0.639e-6■■■■■ 32.4
XRN2Q9H0D6 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC18.98■□□□□ 0.639e-6■■■■■ 32.4
XRN2Q9H0D6 SHKBP1-219ENST00000599575 810 ntTSL 518.94■□□□□ 0.629e-6■■■■■ 32.4
XRN2Q9H0D6 RASSF4-211ENST00000489171 4350 ntTSL 1 (best)18.94■□□□□ 0.629e-6■■■■■ 32.4
XRN2Q9H0D6 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC18.87■□□□□ 0.619e-6■■■■■ 32.4
XRN2Q9H0D6 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.619e-6■■■■■ 32.4
XRN2Q9H0D6 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.619e-6■■■■■ 32.4
XRN2Q9H0D6 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.69e-6■■■■■ 32.4
XRN2Q9H0D6 MXI1-205ENST00000393134 889 ntTSL 2 BASIC18.83■□□□□ 0.69e-6■■■■■ 32.4
XRN2Q9H0D6 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC18.79■□□□□ 0.69e-6■■■■■ 32.4
XRN2Q9H0D6 PALM-209ENST00000592870 1346 ntTSL 218.78■□□□□ 0.69e-6■■■■■ 32.4
XRN2Q9H0D6 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC18.76■□□□□ 0.599e-6■■■■■ 32.4
XRN2Q9H0D6 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.595e-6■■■■■ 32.4
XRN2Q9H0D6 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC18.73■□□□□ 0.599e-6■■■■■ 32.4
XRN2Q9H0D6 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.589e-6■■■■■ 32.4
XRN2Q9H0D6 DDR1-237ENST00000437124 587 ntTSL 418.65■□□□□ 0.589e-6■■■■■ 32.4
XRN2Q9H0D6 SLC27A1-206ENST00000599380 2596 ntTSL 518.63■□□□□ 0.579e-6■■■■■ 32.4
XRN2Q9H0D6 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.574e-8■■■■■ 32.4
XRN2Q9H0D6 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC18.61■□□□□ 0.579e-6■■■■■ 32.4
XRN2Q9H0D6 TOX4-206ENST00000457430 565 ntTSL 418.56■□□□□ 0.569e-6■■■■■ 32.4
XRN2Q9H0D6 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.569e-6■■■■■ 32.4
XRN2Q9H0D6 EVI5-202ENST00000466778 321 ntTSL 318.51■□□□□ 0.559e-6■■■■■ 32.4
XRN2Q9H0D6 AFF1-204ENST00000503477 1478 ntTSL 218.43■□□□□ 0.541e-6■■■■■ 32.4
XRN2Q9H0D6 DDR1-278ENST00000515233 580 ntTSL 418.42■□□□□ 0.549e-6■■■■■ 32.4
XRN2Q9H0D6 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC18.41■□□□□ 0.549e-6■■■■■ 32.4
XRN2Q9H0D6 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.549e-6■■■■■ 32.4
XRN2Q9H0D6 YIF1A-204ENST00000431556 619 ntTSL 218.36■□□□□ 0.539e-6■■■■■ 32.4
XRN2Q9H0D6 KCTD15-203ENST00000587559 622 ntTSL 418.36■□□□□ 0.533e-8■■■■■ 32.4
XRN2Q9H0D6 DDR1-248ENST00000503180 527 ntTSL 418.29■□□□□ 0.529e-6■■■■■ 32.4
XRN2Q9H0D6 HAGH-204ENST00000564445 864 ntTSL 318.22■□□□□ 0.519e-6■■■■■ 32.4
XRN2Q9H0D6 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.519e-6■■■■■ 32.4
XRN2Q9H0D6 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.519e-6■■■■■ 32.4
XRN2Q9H0D6 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.489e-6■■■■■ 32.4
XRN2Q9H0D6 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.481e-6■■■■■ 32.4
XRN2Q9H0D6 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.489e-6■■■■■ 32.4
XRN2Q9H0D6 AFF1-205ENST00000504956 1668 ntTSL 218.04■□□□□ 0.481e-6■■■■■ 32.4
XRN2Q9H0D6 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC18.02■□□□□ 0.489e-6■■■■■ 32.4
XRN2Q9H0D6 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.479e-6■■■■■ 32.4
XRN2Q9H0D6 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.479e-6■■■■■ 32.4
XRN2Q9H0D6 NHP2-206ENST00000514354 472 ntTSL 317.92■□□□□ 0.469e-6■■■■■ 32.4
XRN2Q9H0D6 SLC41A3-220ENST00000514333 588 ntTSL 517.91■□□□□ 0.469e-6■■■■■ 32.4
XRN2Q9H0D6 KAZN-206ENST00000491547 5592 ntTSL 217.82■□□□□ 0.449e-6■■■■■ 32.4
XRN2Q9H0D6 SBNO2-210ENST00000592222 2403 ntTSL 1 (best)17.8■□□□□ 0.449e-6■■■■■ 32.4
XRN2Q9H0D6 MYL5-209ENST00000513662 731 ntTSL 517.77■□□□□ 0.449e-6■■■■■ 32.4
XRN2Q9H0D6 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC17.76■□□□□ 0.435e-6■■■■■ 32.4
XRN2Q9H0D6 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.439e-6■■■■■ 32.4
XRN2Q9H0D6 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.439e-6■■■■■ 32.4
XRN2Q9H0D6 SVIL-207ENST00000465422 196 ntTSL 317.71■□□□□ 0.439e-6■■■■■ 32.4
XRN2Q9H0D6 ZNF767P-204ENST00000486492 1616 ntTSL 217.71■□□□□ 0.439e-6■■■■■ 32.4
XRN2Q9H0D6 CTTN-215ENST00000533931 567 ntTSL 317.7■□□□□ 0.429e-6■■■■■ 32.4
XRN2Q9H0D6 ABCF3-208ENST00000471226 650 ntTSL 517.7■□□□□ 0.429e-6■■■■■ 32.4
XRN2Q9H0D6 ABTB1-207ENST00000474129 683 ntTSL 317.69■□□□□ 0.429e-6■■■■■ 32.4
XRN2Q9H0D6 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC17.68■□□□□ 0.429e-6■■■■■ 32.4
XRN2Q9H0D6 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.429e-9■■■■■ 32.4
XRN2Q9H0D6 SHKBP1-218ENST00000598907 738 ntTSL 217.54■□□□□ 0.49e-6■■■■■ 32.4
XRN2Q9H0D6 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.391e-6■■■■■ 32.4
XRN2Q9H0D6 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.399e-6■■■■■ 32.4
XRN2Q9H0D6 TOX4-210ENST00000494242 650 ntTSL 317.45■□□□□ 0.389e-6■■■■■ 32.4
XRN2Q9H0D6 CTSH-213ENST00000533777 2101 ntTSL 1 (best)17.44■□□□□ 0.389e-6■■■■■ 32.4
XRN2Q9H0D6 ABCF3-209ENST00000472608 657 ntTSL 217.43■□□□□ 0.389e-6■■■■■ 32.4
XRN2Q9H0D6 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.381e-10■■■■■ 32.4
XRN2Q9H0D6 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC17.37■□□□□ 0.379e-6■■■■■ 32.4
XRN2Q9H0D6 KAZN-204ENST00000400797 1295 ntTSL 1 (best) BASIC17.37■□□□□ 0.379e-6■■■■■ 32.4
XRN2Q9H0D6 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC17.34■□□□□ 0.379e-6■■■■■ 32.4
XRN2Q9H0D6 CANT1-209ENST00000591625 599 ntTSL 417.34■□□□□ 0.379e-6■■■■■ 32.4
XRN2Q9H0D6 SHKBP1-205ENST00000594973 2339 ntTSL 217.32■□□□□ 0.369e-6■■■■■ 32.4
XRN2Q9H0D6 RANBP1-203ENST00000411892 584 ntTSL 217.31■□□□□ 0.369e-9■■■■■ 32.4
XRN2Q9H0D6 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.369e-6■■■■■ 32.4
XRN2Q9H0D6 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.359e-6■■■■■ 32.4
XRN2Q9H0D6 SRP14-202ENST00000558243 770 ntTSL 517.24■□□□□ 0.359e-6■■■■■ 32.4
XRN2Q9H0D6 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC17.13■□□□□ 0.339e-6■■■■■ 32.4
Retrieved 100 of 21,068 protein–RNA pairs in 457.1 ms