RNA–Protein interactions for RNA: ENST00000512694.5

DDR1-268, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 623 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-268ENST00000512694 NISCHQ9Y2I1 1504 aa40.22■■■■■ 4.03
DDR1-268ENST00000512694 ABCC9O60706 1549 aa36.5■■■■□ 3.43
DDR1-268ENST00000512694 CCDC180Q9P1Z9 1646 aa36.26■■■■□ 3.39
DDR1-268ENST00000512694 RB1CC1Q8TDY2 1594 aa34.6■■■■□ 3.13
DDR1-268ENST00000512694 DNAJC5BQ9UF47 199 aa34.36■■■■□ 3.09
DDR1-268ENST00000512694 NACADO15069 1562 aa34.25■■■■□ 3.07
DDR1-268ENST00000512694 DCAF8L2P0C7V8 631 aa34.12■■■■□ 3.05
DDR1-268ENST00000512694 UNC13AQ9UPW8 1703 aa34.01■■■■□ 3.03
DDR1-268ENST00000512694 PABPN1Q86U42 306 aaKnown RBP eCLIP33.91■■■■□ 3.02
DDR1-268ENST00000512694 BICRAQ9NZM4 1560 aa33.62■■■□□ 2.97
DDR1-268ENST00000512694 MYO15BQ96JP2 1530 aa33.6■■■□□ 2.97
DDR1-268ENST00000512694 ZCCHC6Q5VYS8 1495 aaKnown RBP33.3■■■□□ 2.92
DDR1-268ENST00000512694 SCRIBQ14160 1630 aa33.13■■■□□ 2.89
DDR1-268ENST00000512694 DCAF1Q9Y4B6 1507 aa33.12■■■□□ 2.89
DDR1-268ENST00000512694 SHROOM4Q9ULL8 1493 aa32.99■■■□□ 2.87
DDR1-268ENST00000512694 CC2D2AQ9P2K1 1620 aa32.97■■■□□ 2.87
DDR1-268ENST00000512694 CECR2Q9BXF3 1484 aa32.85■■■□□ 2.85
DDR1-268ENST00000512694 EIF4G1Q04637 1599 aaKnown RBP32.8■■■□□ 2.84
DDR1-268ENST00000512694 DNAJC5Q9H3Z4 198 aa31.64■■■□□ 2.66
DDR1-268ENST00000512694 NCAPD3P42695 1498 aa31.57■■■□□ 2.64
DDR1-268ENST00000512694 ERCC6Q03468 1493 aa31.52■■■□□ 2.64
DDR1-268ENST00000512694 SMARCA4P51532 1647 aa31.5■■■□□ 2.63
DDR1-268ENST00000512694 ATAD2BQ9ULI0 1458 aa31.5■■■□□ 2.63
DDR1-268ENST00000512694 CUX2O14529 1486 aa31.46■■■□□ 2.63
DDR1-268ENST00000512694 SMARCA2P51531 1590 aa31.42■■■□□ 2.62
DDR1-268ENST00000512694 HMGXB3Q12766 1538 aa31.39■■■□□ 2.61
DDR1-268ENST00000512694 NESP48681 1621 aa31.31■■■□□ 2.6
DDR1-268ENST00000512694 BAZ1AQ9NRL2 1556 aaPredicted RBP31.26■■■□□ 2.59
DDR1-268ENST00000512694 BAZ1BQ9UIG0 1483 aaKnown RBP31.24■■■□□ 2.59
DDR1-268ENST00000512694 PEG3Q9GZU2 1588 aa31.09■■■□□ 2.57
DDR1-268ENST00000512694 MROH2BQ7Z745 1585 aa31.05■■■□□ 2.56
DDR1-268ENST00000512694 THOC2Q8NI27 1593 aaKnown RBP31.04■■■□□ 2.56
DDR1-268ENST00000512694 KIF21AQ7Z4S6 1674 aa30.99■■■□□ 2.55
DDR1-268ENST00000512694 LAMC3Q9Y6N6 1575 aa30.98■■■□□ 2.55
DDR1-268ENST00000512694 PDS5BQ9NTI5 1447 aa30.75■■■□□ 2.51
DDR1-268ENST00000512694 WIZO95785 1651 aa30.74■■■□□ 2.51
DDR1-268ENST00000512694 CADPSQ9ULU8 1353 aa30.62■■■□□ 2.49
DDR1-268ENST00000512694 MRC2Q9UBG0 1479 aa30.57■■■□□ 2.48
DDR1-268ENST00000512694 WDR62O43379 1518 aa30.49■■■□□ 2.47
DDR1-268ENST00000512694 CEP164Q9UPV0 1460 aa30.41■■■□□ 2.46
DDR1-268ENST00000512694 FANCD2Q9BXW9 1451 aa30.35■■■□□ 2.45
DDR1-268ENST00000512694 TRIM41Q8WV44 630 aa30.32■■■□□ 2.44
DDR1-268ENST00000512694 RSF1Q96T23 1441 aaPredicted RBP30.25■■■□□ 2.43
DDR1-268ENST00000512694 TOP2AP11388 1531 aaKnown RBP30.25■■■□□ 2.43
DDR1-268ENST00000512694 CFTRP13569 1480 aa30.23■■■□□ 2.43
DDR1-268ENST00000512694 PRDM2Q13029 1718 aa30.14■■■□□ 2.42
DDR1-268ENST00000512694 URB2Q14146 1524 aaKnown RBP30.14■■■□□ 2.42
DDR1-268ENST00000512694 OSCARQ8IYS5 282 aa29.94■■■□□ 2.38
DDR1-268ENST00000512694 CCDC88BA6NC98 1476 aa29.88■■■□□ 2.37
DDR1-268ENST00000512694 ZNF608Q9ULD9 1512 aaPredicted RBP29.81■■■□□ 2.36
DDR1-268ENST00000512694 TOPBP1Q92547 1522 aa29.76■■■□□ 2.36
DDR1-268ENST00000512694 IFT140Q96RY7 1462 aa29.76■■■□□ 2.35
DDR1-268ENST00000512694 RIMBP3CA6NJZ7 1639 aa29.74■■■□□ 2.35
DDR1-268ENST00000512694 RIMBP3BA6NNM3 1639 aa29.74■■■□□ 2.35
DDR1-268ENST00000512694 RIMBP3Q9UFD9 1639 aa29.74■■■□□ 2.35
DDR1-268ENST00000512694 EIF4G3O43432 1585 aaKnown RBP29.69■■■□□ 2.34
DDR1-268ENST00000512694 DNMBPQ6XZF7 1577 aa29.64■■■□□ 2.33
DDR1-268ENST00000512694 CHD1O14646 1710 aa29.59■■■□□ 2.33
DDR1-268ENST00000512694 ABCC8Q09428 1581 aa29.58■■■□□ 2.33
DDR1-268ENST00000512694 ARHGEF11O15085 1522 aa29.57■■■□□ 2.32
DDR1-268ENST00000512694 TARBP1Q13395 1621 aaKnown RBP29.53■■■□□ 2.32
DDR1-268ENST00000512694 AQRO60306 1485 aaKnown RBP eCLIP29.49■■■□□ 2.312e-7■■■■■ 31.6
DDR1-268ENST00000512694 POLA1P09884 1462 aaPredicted RBP29.43■■■□□ 2.3
DDR1-268ENST00000512694 FBLN2P98095 1184 aa29.37■■■□□ 2.29
DDR1-268ENST00000512694 RAD54L2Q9Y4B4 1467 aa29.36■■■□□ 2.29
DDR1-268ENST00000512694 CYB5RLQ6IPT4 315 aa29.33■■■□□ 2.29
DDR1-268ENST00000512694 ARAP1Q96P48 1450 aa29.27■■■□□ 2.28
DDR1-268ENST00000512694 TDRD9Q8NDG6 1382 aaKnown RBP29.26■■■□□ 2.28
DDR1-268ENST00000512694 SOGA1O94964 1423 aa29.26■■■□□ 2.27
DDR1-268ENST00000512694 FGD5Q6ZNL6 1462 aa29.24■■■□□ 2.27
DDR1-268ENST00000512694 SNAPC4Q5SXM2 1469 aa29.22■■■□□ 2.27
DDR1-268ENST00000512694 CUX1P39880 1505 aa29.19■■■□□ 2.26
DDR1-268ENST00000512694 WDR97A6NE52 1622 aa29.14■■■□□ 2.26
DDR1-268ENST00000512694 TRHP20396 242 aaPredicted RBP29.12■■■□□ 2.25
DDR1-268ENST00000512694 CLASP1Q7Z460 1538 aa29.1■■■□□ 2.25
DDR1-268ENST00000512694 PBRM1Q86U86 1689 aa29.09■■■□□ 2.25
DDR1-268ENST00000512694 SYNJ1O43426 1573 aa29.07■■■□□ 2.24
DDR1-268ENST00000512694 MAGI1Q96QZ7 1491 aaPredicted RBP29.05■■■□□ 2.24
DDR1-268ENST00000512694 CHMP7Q8WUX9 453 aaPredicted RBP29.04■■■□□ 2.24
DDR1-268ENST00000512694 GRIN2BQ13224 1484 aa29.04■■■□□ 2.24
DDR1-268ENST00000512694 SYNJ2O15056 1496 aa28.97■■■□□ 2.23
DDR1-268ENST00000512694 GAPVD1Q14C86 1478 aa28.92■■■□□ 2.22
DDR1-268ENST00000512694 ABCA5Q8WWZ7 1642 aa28.9■■■□□ 2.22
DDR1-268ENST00000512694 SUPT5HO00267 1087 aaKnown RBP28.85■■■□□ 2.21
DDR1-268ENST00000512694 ABCA10Q8WWZ4 1543 aa28.84■■■□□ 2.21
DDR1-268ENST00000512694 ADAMTS12P58397 1594 aa28.71■■■□□ 2.19
DDR1-268ENST00000512694 ERCC6L2Q5T890 1561 aa28.71■■■□□ 2.19
DDR1-268ENST00000512694 GRIN2AQ12879 1464 aa28.69■■■□□ 2.18
DDR1-268ENST00000512694 BIVM-ERCC5R4GMW8 1640 aa28.69■■■□□ 2.18
DDR1-268ENST00000512694 WRNQ14191 1432 aaPredicted RBP eCLIP28.67■■■□□ 2.18
DDR1-268ENST00000512694 CEP170Q5SW79 1584 aa28.67■■■□□ 2.18
DDR1-268ENST00000512694 TOP2BQ02880 1626 aa28.65■■■□□ 2.18
DDR1-268ENST00000512694 NUP160Q12769 1436 aa28.55■■■□□ 2.16
DDR1-268ENST00000512694 SHROOM2Q13796 1616 aa28.53■■■□□ 2.16
DDR1-268ENST00000512694 FHAD1B1AJZ9 1412 aa28.52■■■□□ 2.16
DDR1-268ENST00000512694 ERICH3Q5RHP9 1530 aa28.48■■■□□ 2.15
DDR1-268ENST00000512694 AEBP2Q6ZN18 517 aaPredicted RBP28.42■■■□□ 2.14
DDR1-268ENST00000512694 KIF13AQ9H1H9 1805 aa28.39■■■□□ 2.13
DDR1-268ENST00000512694 PRG4Q92954 1404 aaPredicted RBP28.35■■■□□ 2.13
DDR1-268ENST00000512694 RUSC2Q8N2Y8 1516 aa28.31■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 228 ms