RNA–Protein interactions for RNA: ENST00000343632.8

GGA1-203, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GGA1, Length 3,159 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA1-203ENST00000343632 NISCHQ9Y2I1 1504 aa38.66■■■■□ 3.78
GGA1-203ENST00000343632 CCDC180Q9P1Z9 1646 aa33.32■■■□□ 2.92
GGA1-203ENST00000343632 ZCCHC6Q5VYS8 1495 aaKnown RBP32.59■■■□□ 2.81
GGA1-203ENST00000343632 SHROOM4Q9ULL8 1493 aa32.2■■■□□ 2.75
GGA1-203ENST00000343632 DCAF8L2P0C7V8 631 aa31.95■■■□□ 2.71
GGA1-203ENST00000343632 DCAF1Q9Y4B6 1507 aa31.85■■■□□ 2.69
GGA1-203ENST00000343632 SUPT5HO00267 1087 aaKnown RBP31.26■■■□□ 2.59
GGA1-203ENST00000343632 MYO15BQ96JP2 1530 aa31.2■■■□□ 2.59
GGA1-203ENST00000343632 ABCC9O60706 1549 aa31.19■■■□□ 2.58
GGA1-203ENST00000343632 SCRIBQ14160 1630 aa30.92■■■□□ 2.54
GGA1-203ENST00000343632 NACADO15069 1562 aa30.91■■■□□ 2.54
GGA1-203ENST00000343632 RB1CC1Q8TDY2 1594 aa30.53■■■□□ 2.48
GGA1-203ENST00000343632 RSF1Q96T23 1441 aaPredicted RBP30.27■■■□□ 2.44
GGA1-203ENST00000343632 CHIC1Q5VXU3 224 aa30.17■■■□□ 2.42
GGA1-203ENST00000343632 CECR2Q9BXF3 1484 aa30.1■■■□□ 2.41
GGA1-203ENST00000343632 UNC13AQ9UPW8 1703 aa30.04■■■□□ 2.4
GGA1-203ENST00000343632 MROH2BQ7Z745 1585 aa29.96■■■□□ 2.39
GGA1-203ENST00000343632 BAZ1AQ9NRL2 1556 aaPredicted RBP29.77■■■□□ 2.36
GGA1-203ENST00000343632 WIZO95785 1651 aa29.77■■■□□ 2.36
GGA1-203ENST00000343632 BICRAQ9NZM4 1560 aa29.68■■■□□ 2.34
GGA1-203ENST00000343632 PABPN1Q86U42 306 aaKnown RBP eCLIP29.6■■■□□ 2.332e-8■■■□□ 14.7
GGA1-203ENST00000343632 SMARCA4P51532 1647 aa29.6■■■□□ 2.33
GGA1-203ENST00000343632 TOP2AP11388 1531 aaKnown RBP29.37■■■□□ 2.29
GGA1-203ENST00000343632 TRIM41Q8WV44 630 aa29.25■■■□□ 2.27
GGA1-203ENST00000343632 SMARCA2P51531 1590 aa29.16■■■□□ 2.26
GGA1-203ENST00000343632 EIF4G1Q04637 1599 aaKnown RBP29.16■■■□□ 2.26
GGA1-203ENST00000343632 CCDC88BA6NC98 1476 aa29.15■■■□□ 2.26
GGA1-203ENST00000343632 LOC105371045A0A1W2PR82 267 aa29.13■■■□□ 2.25
GGA1-203ENST00000343632 PEG3Q9GZU2 1588 aa29.13■■■□□ 2.25
GGA1-203ENST00000343632 ATAD2BQ9ULI0 1458 aa28.97■■■□□ 2.23
GGA1-203ENST00000343632 FAM9AQ8IZU1 332 aaPredicted RBP28.87■■■□□ 2.21
GGA1-203ENST00000343632 BAZ1BQ9UIG0 1483 aaKnown RBP28.84■■■□□ 2.21
GGA1-203ENST00000343632 ABCC8Q09428 1581 aa28.81■■■□□ 2.2
GGA1-203ENST00000343632 NCAPD3P42695 1498 aa28.56■■■□□ 2.16
GGA1-203ENST00000343632 HMGXB3Q12766 1538 aa28.55■■■□□ 2.16
GGA1-203ENST00000343632 EHMT2Q96KQ7 1210 aa28.54■■■□□ 2.16
GGA1-203ENST00000343632 WRNQ14191 1432 aaPredicted RBP eCLIP28.46■■■□□ 2.15
GGA1-203ENST00000343632 PCGF6Q9BYE7 350 aa28.43■■■□□ 2.14
GGA1-203ENST00000343632 SOGA1O94964 1423 aa28.39■■■□□ 2.14
GGA1-203ENST00000343632 SYNJ1O43426 1573 aa28.36■■■□□ 2.13
GGA1-203ENST00000343632 EEA1Q15075 1411 aa28.28■■■□□ 2.12
GGA1-203ENST00000343632 RUSC2Q8N2Y8 1516 aa28.27■■■□□ 2.12
GGA1-203ENST00000343632 CSRNP3Q8WYN3 585 aa28.18■■■□□ 2.1
GGA1-203ENST00000343632 CC2D2AQ9P2K1 1620 aa28.17■■■□□ 2.1
GGA1-203ENST00000343632 TRIM26Q12899 539 aaPredicted RBP28.16■■■□□ 2.1
GGA1-203ENST00000343632 CFTRP13569 1480 aa28.13■■■□□ 2.09
GGA1-203ENST00000343632 TOP2BQ02880 1626 aa28.12■■■□□ 2.09
GGA1-203ENST00000343632 BIVM-ERCC5R4GMW8 1640 aa28.07■■■□□ 2.08
GGA1-203ENST00000343632 HRCP23327 699 aa28.03■■■□□ 2.08
GGA1-203ENST00000343632 TNIKQ9UKE5 1360 aa28.02■■■□□ 2.08
GGA1-203ENST00000343632 GOLGA3Q08378 1498 aa27.99■■■□□ 2.07
GGA1-203ENST00000343632 PRDM2Q13029 1718 aa27.97■■■□□ 2.07
GGA1-203ENST00000343632 CEP162Q5TB80 1403 aa27.97■■■□□ 2.07
GGA1-203ENST00000343632 CUX1P39880 1505 aa27.96■■■□□ 2.07
GGA1-203ENST00000343632 UBTFP17480 764 aaKnown RBP27.94■■■□□ 2.06
GGA1-203ENST00000343632 KIF21BO75037 1637 aa27.93■■■□□ 2.06
GGA1-203ENST00000343632 CEP164Q9UPV0 1460 aa27.92■■■□□ 2.06
GGA1-203ENST00000343632 CADPSQ9ULU8 1353 aa27.92■■■□□ 2.06
GGA1-203ENST00000343632 PPARGC1BQ86YN6 1023 aaKnown RBP27.79■■■□□ 2.04
GGA1-203ENST00000343632 RAPGEF2Q9Y4G8 1499 aa27.76■■■□□ 2.03
GGA1-203ENST00000343632 KIF27Q86VH2 1401 aa27.66■■■□□ 2.02
GGA1-203ENST00000343632 FANCD2Q9BXW9 1451 aa27.64■■■□□ 2.02
GGA1-203ENST00000343632 PRXQ9BXM0 1461 aa27.63■■■□□ 2.01
GGA1-203ENST00000343632 ERICH3Q5RHP9 1530 aa27.61■■■□□ 2.01
GGA1-203ENST00000343632 CLIP1P30622 1438 aa27.61■■■□□ 2.01
GGA1-203ENST00000343632 NESP48681 1621 aa27.59■■■□□ 2.01
GGA1-203ENST00000343632 FGD5Q6ZNL6 1462 aa27.56■■■□□ 2
GGA1-203ENST00000343632 CUX2O14529 1486 aa27.51■■□□□ 1.99
GGA1-203ENST00000343632 LAMC3Q9Y6N6 1575 aa27.48■■□□□ 1.99
GGA1-203ENST00000343632 DNAJC5BQ9UF47 199 aa27.46■■□□□ 1.99
GGA1-203ENST00000343632 TTBK1Q5TCY1 1321 aaPredicted RBP27.46■■□□□ 1.99
GGA1-203ENST00000343632 DNMBPQ6XZF7 1577 aa27.46■■□□□ 1.99
GGA1-203ENST00000343632 RANGAP1P46060 587 aaPredicted RBP27.44■■□□□ 1.98
GGA1-203ENST00000343632 VPS8Q8N3P4 1428 aa27.43■■□□□ 1.98
GGA1-203ENST00000343632 TOPBP1Q92547 1522 aa27.4■■□□□ 1.98
GGA1-203ENST00000343632 IGF1RP08069 1367 aa27.4■■□□□ 1.98
GGA1-203ENST00000343632 POLA1P09884 1462 aaPredicted RBP27.33■■□□□ 1.97
GGA1-203ENST00000343632 RAD54L2Q9Y4B4 1467 aa27.31■■□□□ 1.96
GGA1-203ENST00000343632 URB2Q14146 1524 aaKnown RBP27.28■■□□□ 1.96
GGA1-203ENST00000343632 ABCA10Q8WWZ4 1543 aa27.27■■□□□ 1.96
GGA1-203ENST00000343632 PDS5BQ9NTI5 1447 aa27.27■■□□□ 1.96
GGA1-203ENST00000343632 ZEB1P37275 1124 aaPredicted RBP27.27■■□□□ 1.96
GGA1-203ENST00000343632 ARAP1Q96P48 1450 aa27.27■■□□□ 1.96
GGA1-203ENST00000343632 CARMIL1Q5VZK9 1371 aa27.26■■□□□ 1.96
GGA1-203ENST00000343632 KIF21AQ7Z4S6 1674 aa27.2■■□□□ 1.95
GGA1-203ENST00000343632 APLP2Q06481 763 aa27.19■■□□□ 1.94
GGA1-203ENST00000343632 ARHGAP35Q9NRY4 1499 aa27.15■■□□□ 1.94
GGA1-203ENST00000343632 WDR97A6NE52 1622 aa27.13■■□□□ 1.93
GGA1-203ENST00000343632 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.09■■□□□ 1.93
GGA1-203ENST00000343632 CUL7Q14999 1698 aa27.05■■□□□ 1.92
GGA1-203ENST00000343632 ABCA5Q8WWZ7 1642 aa27.01■■□□□ 1.91
GGA1-203ENST00000343632 CCER1Q8TC90 406 aaPredicted RBP27■■□□□ 1.91
GGA1-203ENST00000343632 TDRD9Q8NDG6 1382 aaKnown RBP27■■□□□ 1.91
GGA1-203ENST00000343632 GAPVD1Q14C86 1478 aa26.95■■□□□ 1.9
GGA1-203ENST00000343632 TARBP1Q13395 1621 aaKnown RBP26.93■■□□□ 1.9
GGA1-203ENST00000343632 KANK4Q5T7N3 995 aaPredicted RBP26.93■■□□□ 1.9
GGA1-203ENST00000343632 MRC2Q9UBG0 1479 aa26.91■■□□□ 1.9
GGA1-203ENST00000343632 CTTNBP2Q8WZ74 1663 aa26.88■■□□□ 1.89
GGA1-203ENST00000343632 HNRNPUL2Q1KMD3 747 aaKnown RBP26.87■■□□□ 1.89
GGA1-203ENST00000343632 P3H3Q8IVL6 736 aa26.79■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms