RNA–Protein interactions for RNA: ENST00000305877.12

BCR-201, Transcript of BCR, RhoGEF and GTPase activating protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BCR, Length 7,082 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BCR-201ENST00000305877 DCAF8L2P0C7V8 631 aa31.66■■■□□ 2.66
BCR-201ENST00000305877 EHMT2Q96KQ7 1210 aa29.69■■■□□ 2.34
BCR-201ENST00000305877 SUPT5HO00267 1087 aaKnown RBP28.91■■■□□ 2.22
BCR-201ENST00000305877 TTBK1Q5TCY1 1321 aaPredicted RBP28.48■■■□□ 2.15
BCR-201ENST00000305877 SHROOM4Q9ULL8 1493 aa28.37■■■□□ 2.13
BCR-201ENST00000305877 RANGAP1P46060 587 aaPredicted RBP28.24■■■□□ 2.11
BCR-201ENST00000305877 APLP2Q06481 763 aa28.04■■■□□ 2.08
BCR-201ENST00000305877 ATP1B4Q9UN42 357 aaPredicted RBP28.01■■■□□ 2.07
BCR-201ENST00000305877 FAM9AQ8IZU1 332 aaPredicted RBP27.96■■■□□ 2.07
BCR-201ENST00000305877 PELP1Q8IZL8 1130 aaKnown RBP27.89■■■□□ 2.06
BCR-201ENST00000305877 ERICH6Q7L0X2 663 aa27.52■■■□□ 2
BCR-201ENST00000305877 CHIC1Q5VXU3 224 aa27.51■■■□□ 2
BCR-201ENST00000305877 MYT1LQ9UL68 1186 aa27.42■■□□□ 1.98
BCR-201ENST00000305877 PCGF6Q9BYE7 350 aa27.21■■□□□ 1.95
BCR-201ENST00000305877 CNGB1Q14028 1251 aaPredicted RBP26.99■■□□□ 1.91
BCR-201ENST00000305877 MYT1Q01538 1121 aa26.97■■□□□ 1.91
BCR-201ENST00000305877 POLR3GLQ9BT43 218 aa26.96■■□□□ 1.91
BCR-201ENST00000305877 SLC4A1APQ9BWU0 796 aaKnown RBP26.83■■□□□ 1.89
BCR-201ENST00000305877 YTHDC1Q96MU7 727 aaKnown RBP26.81■■□□□ 1.88
BCR-201ENST00000305877 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.79■■□□□ 1.88
BCR-201ENST00000305877 HNRNPUL2Q1KMD3 747 aaKnown RBP26.79■■□□□ 1.88
BCR-201ENST00000305877 CCER1Q8TC90 406 aaPredicted RBP26.78■■□□□ 1.88
BCR-201ENST00000305877 PPARGC1BQ86YN6 1023 aaKnown RBP26.65■■□□□ 1.86
BCR-201ENST00000305877 UBTFP17480 764 aaKnown RBP26.65■■□□□ 1.86
BCR-201ENST00000305877 ITGAEP38570 1179 aa26.49■■□□□ 1.83
BCR-201ENST00000305877 NEFLP07196 543 aa26.44■■□□□ 1.82
BCR-201ENST00000305877 DAXXQ9UER7 740 aaPredicted RBP26.31■■□□□ 1.8
BCR-201ENST00000305877 TRIM41Q8WV44 630 aa26.3■■□□□ 1.8
BCR-201ENST00000305877 CENPBP07199 599 aaPredicted RBP26.26■■□□□ 1.79
BCR-201ENST00000305877 SLC24A1O60721 1099 aa26.24■■□□□ 1.79
BCR-201ENST00000305877 BCL11AQ9H165 835 aa26.23■■□□□ 1.79
BCR-201ENST00000305877 PLPPR3Q6T4P5 718 aa26.08■■□□□ 1.77
BCR-201ENST00000305877 BCANQ96GW7 911 aa25.92■■□□□ 1.74
BCR-201ENST00000305877 CLSPNQ9HAW4 1339 aa25.88■■□□□ 1.73
BCR-201ENST00000305877 NISCHQ9Y2I1 1504 aa25.85■■□□□ 1.73
BCR-201ENST00000305877 ZNF316A6NFI3 1004 aaPredicted RBP25.66■■□□□ 1.7
BCR-201ENST00000305877 FBLN2P98095 1184 aa25.58■■□□□ 1.69
BCR-201ENST00000305877 ZEB1P37275 1124 aaPredicted RBP25.49■■□□□ 1.67
BCR-201ENST00000305877 ZNF326Q5BKZ1 582 aaKnown RBP25.48■■□□□ 1.67
BCR-201ENST00000305877 TRIM52Q96A61 297 aa25.42■■□□□ 1.66
BCR-201ENST00000305877 FAM50AQ14320 339 aaKnown RBP25.38■■□□□ 1.65
BCR-201ENST00000305877 A0A0G2JS52 829 aa25.36■■□□□ 1.65
BCR-201ENST00000305877 ZBTB47Q9UFB7 747 aaPredicted RBP25.35■■□□□ 1.65
BCR-201ENST00000305877 ARID3CA6NKF2 412 aa25.33■■□□□ 1.65
BCR-201ENST00000305877 PLEKHG5O94827 1062 aa25.3■■□□□ 1.64
BCR-201ENST00000305877 SCAF1Q9H7N4 1312 aaKnown RBP25.26■■□□□ 1.63
BCR-201ENST00000305877 NEUROD1Q13562 356 aa25.24■■□□□ 1.63
BCR-201ENST00000305877 CANXP27824 592 aaKnown RBP25.12■■□□□ 1.61
BCR-201ENST00000305877 SENP3Q9H4L4 574 aaPredicted RBP25.11■■□□□ 1.61
BCR-201ENST00000305877 RTL5Q5HYW3 569 aaPredicted RBP25.09■■□□□ 1.61
BCR-201ENST00000305877 ESF1Q9H501 851 aaKnown RBP25.03■■□□□ 1.6
BCR-201ENST00000305877 PABPN1Q86U42 306 aaKnown RBP eCLIP24.99■■□□□ 1.59
BCR-201ENST00000305877 STAG3Q9UJ98 1225 aa24.93■■□□□ 1.58
BCR-201ENST00000305877 CHGAP10645 457 aaKnown RBP24.93■■□□□ 1.58
BCR-201ENST00000305877 ZBTB7CA1YPR0 619 aa24.92■■□□□ 1.58
BCR-201ENST00000305877 LOC105371045A0A1W2PR82 267 aa24.92■■□□□ 1.58
BCR-201ENST00000305877 NEFMP07197 916 aa24.91■■□□□ 1.58
BCR-201ENST00000305877 ZNF777Q9ULD5 760 aaPredicted RBP24.84■■□□□ 1.57
BCR-201ENST00000305877 TULP1O00294 542 aaPredicted RBP24.82■■□□□ 1.56
BCR-201ENST00000305877 P3H3Q8IVL6 736 aa24.78■■□□□ 1.56
BCR-201ENST00000305877 TRIM26Q12899 539 aaPredicted RBP24.7■■□□□ 1.54
BCR-201ENST00000305877 NPM2Q86SE8 214 aaKnown RBP24.63■■□□□ 1.53
BCR-201ENST00000305877 HRCP23327 699 aa24.62■■□□□ 1.53
BCR-201ENST00000305877 C14orf37Q86TY3 774 aa24.58■■□□□ 1.52
BCR-201ENST00000305877 NCBP3Q53F19 620 aaKnown RBP24.57■■□□□ 1.52
BCR-201ENST00000305877 ARXQ96QS3 562 aa24.53■■□□□ 1.52
BCR-201ENST00000305877 SALL2Q9Y467 1007 aaPredicted RBP24.5■■□□□ 1.51
BCR-201ENST00000305877 HSP90AA1P07900 732 aaKnown RBP24.43■■□□□ 1.5
BCR-201ENST00000305877 ANP32CO43423 234 aa24.42■■□□□ 1.5
BCR-201ENST00000305877 HAP1P54257 671 aaPredicted RBP24.41■■□□□ 1.5
BCR-201ENST00000305877 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.39■■□□□ 1.494e-6■■■□□ 14.6
BCR-201ENST00000305877 DIEXFQ68CQ4 756 aaKnown RBP24.38■■□□□ 1.49
BCR-201ENST00000305877 TAOK2Q9UL54 1235 aa24.35■■□□□ 1.49
BCR-201ENST00000305877 NPM1P06748 294 aaKnown RBP eCLIP24.35■■□□□ 1.49
BCR-201ENST00000305877 CDK11BP21127 795 aaKnown RBP24.32■■□□□ 1.48
BCR-201ENST00000305877 CDK11AQ9UQ88 783 aaPredicted RBP24.32■■□□□ 1.48
BCR-201ENST00000305877 ABCC9O60706 1549 aa24.31■■□□□ 1.48
BCR-201ENST00000305877 TPRNQ4KMQ1 711 aa24.23■■□□□ 1.47
BCR-201ENST00000305877 NPHP1O15259 732 aa24.21■■□□□ 1.47
BCR-201ENST00000305877 ARID4BQ4LE39 1312 aaPredicted RBP24.17■■□□□ 1.46
BCR-201ENST00000305877 EIF5BO60841 1220 aaKnown RBP24.1■■□□□ 1.45
BCR-201ENST00000305877 ANP32BQ92688 251 aaKnown RBP24.09■■□□□ 1.45
BCR-201ENST00000305877 LMOD2Q6P5Q4 547 aa24.09■■□□□ 1.45
BCR-201ENST00000305877 GTF3C3Q9Y5Q9 886 aa24.08■■□□□ 1.45
BCR-201ENST00000305877 KDM2AQ9Y2K7 1162 aa24.03■■□□□ 1.44
BCR-201ENST00000305877 PPP1R15AO75807 674 aaPredicted RBP23.98■■□□□ 1.43
BCR-201ENST00000305877 ANP32AP39687 249 aaKnown RBP23.98■■□□□ 1.43
BCR-201ENST00000305877 FAM9BQ8IZU0 186 aa23.96■■□□□ 1.43
BCR-201ENST00000305877 TRHP20396 242 aaPredicted RBP23.96■■□□□ 1.43
BCR-201ENST00000305877 SENP3-EIF4A1A0A087X0R7 540 aa23.94■■□□□ 1.42
BCR-201ENST00000305877 CHIC2Q9UKJ5 165 aa23.94■■□□□ 1.42
BCR-201ENST00000305877 CLSTN1O94985 981 aa23.91■■□□□ 1.42
BCR-201ENST00000305877 PPM1GO15355 546 aaPredicted RBP23.87■■□□□ 1.41
BCR-201ENST00000305877 AMER1Q5JTC6 1135 aaPredicted RBP23.87■■□□□ 1.41
BCR-201ENST00000305877 KCNH8Q96L42 1107 aa23.86■■□□□ 1.41
BCR-201ENST00000305877 UPF2Q9HAU5 1272 aaKnown RBP23.85■■□□□ 1.41
BCR-201ENST00000305877 ZBTB4Q9P1Z0 1013 aaPredicted RBP23.78■■□□□ 1.4
BCR-201ENST00000305877 TMC1Q8TDI8 760 aa23.77■■□□□ 1.4
BCR-201ENST00000305877 NBR1Q14596 966 aa23.76■■□□□ 1.39
BCR-201ENST00000305877 WDR43Q15061 677 aaKnown RBP eCLIP23.75■■□□□ 1.391e-6■□□□□ 9.3
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms