RNA–Protein interactions for RNA: ENST00000452684.2

SOD2-206, Transcript of superoxide dismutase 2, humanhuman

TSL 1 (best) BASIC

Gene SOD2, Length 2,045 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOD2-206ENST00000452684 NISCHQ9Y2I1 1504 aa40.59■■■■■ 4.09
SOD2-206ENST00000452684 CCDC180Q9P1Z9 1646 aa35.04■■■■□ 3.2
SOD2-206ENST00000452684 ZCCHC6Q5VYS8 1495 aaKnown RBP34.18■■■■□ 3.06
SOD2-206ENST00000452684 SHROOM4Q9ULL8 1493 aa33.56■■■□□ 2.96
SOD2-206ENST00000452684 DCAF8L2P0C7V8 631 aa33.48■■■□□ 2.95
SOD2-206ENST00000452684 DCAF1Q9Y4B6 1507 aa33.47■■■□□ 2.95
SOD2-206ENST00000452684 ABCC9O60706 1549 aa32.94■■■□□ 2.86
SOD2-206ENST00000452684 MYO15BQ96JP2 1530 aa32.89■■■□□ 2.86
SOD2-206ENST00000452684 NACADO15069 1562 aa32.58■■■□□ 2.81
SOD2-206ENST00000452684 SUPT5HO00267 1087 aaKnown RBP32.49■■■□□ 2.79
SOD2-206ENST00000452684 SCRIBQ14160 1630 aa32.44■■■□□ 2.78
SOD2-206ENST00000452684 RB1CC1Q8TDY2 1594 aa32.19■■■□□ 2.74
SOD2-206ENST00000452684 RSF1Q96T23 1441 aaPredicted RBP31.72■■■□□ 2.67
SOD2-206ENST00000452684 CECR2Q9BXF3 1484 aa31.61■■■□□ 2.65
SOD2-206ENST00000452684 UNC13AQ9UPW8 1703 aa31.6■■■□□ 2.65
SOD2-206ENST00000452684 MROH2BQ7Z745 1585 aa31.43■■■□□ 2.62
SOD2-206ENST00000452684 BICRAQ9NZM4 1560 aa31.34■■■□□ 2.61
SOD2-206ENST00000452684 CHIC1Q5VXU3 224 aa31.33■■■□□ 2.61
SOD2-206ENST00000452684 BAZ1AQ9NRL2 1556 aaPredicted RBP31.24■■■□□ 2.59
SOD2-206ENST00000452684 PABPN1Q86U42 306 aaKnown RBP eCLIP31.24■■■□□ 2.59
SOD2-206ENST00000452684 WIZO95785 1651 aa31.17■■■□□ 2.58
SOD2-206ENST00000452684 SMARCA4P51532 1647 aa31.08■■■□□ 2.57
SOD2-206ENST00000452684 TOP2AP11388 1531 aaKnown RBP30.79■■■□□ 2.52
SOD2-206ENST00000452684 PEG3Q9GZU2 1588 aa30.66■■■□□ 2.5
SOD2-206ENST00000452684 CCDC88BA6NC98 1476 aa30.58■■■□□ 2.49
SOD2-206ENST00000452684 SMARCA2P51531 1590 aa30.56■■■□□ 2.48
SOD2-206ENST00000452684 ATAD2BQ9ULI0 1458 aa30.51■■■□□ 2.47
SOD2-206ENST00000452684 EIF4G1Q04637 1599 aaKnown RBP30.51■■■□□ 2.47
SOD2-206ENST00000452684 TRIM41Q8WV44 630 aa30.45■■■□□ 2.46
SOD2-206ENST00000452684 BAZ1BQ9UIG0 1483 aaKnown RBP30.32■■■□□ 2.44
SOD2-206ENST00000452684 LOC105371045A0A1W2PR82 267 aa30.22■■■□□ 2.43
SOD2-206ENST00000452684 NCAPD3P42695 1498 aa30.14■■■□□ 2.42
SOD2-206ENST00000452684 ABCC8Q09428 1581 aa30.09■■■□□ 2.41
SOD2-206ENST00000452684 HMGXB3Q12766 1538 aa30.07■■■□□ 2.4
SOD2-206ENST00000452684 FAM9AQ8IZU1 332 aaPredicted RBP30■■■□□ 2.39
SOD2-206ENST00000452684 WRNQ14191 1432 aaPredicted RBP eCLIP29.79■■■□□ 2.36
SOD2-206ENST00000452684 CC2D2AQ9P2K1 1620 aa29.76■■■□□ 2.36
SOD2-206ENST00000452684 SYNJ1O43426 1573 aa29.68■■■□□ 2.34
SOD2-206ENST00000452684 SOGA1O94964 1423 aa29.65■■■□□ 2.34
SOD2-206ENST00000452684 EHMT2Q96KQ7 1210 aa29.62■■■□□ 2.33
SOD2-206ENST00000452684 CFTRP13569 1480 aa29.61■■■□□ 2.33
SOD2-206ENST00000452684 RUSC2Q8N2Y8 1516 aa29.54■■■□□ 2.32
SOD2-206ENST00000452684 EEA1Q15075 1411 aa29.5■■■□□ 2.31
SOD2-206ENST00000452684 TOP2BQ02880 1626 aa29.46■■■□□ 2.31
SOD2-206ENST00000452684 CSRNP3Q8WYN3 585 aa29.42■■■□□ 2.3
SOD2-206ENST00000452684 CADPSQ9ULU8 1353 aa29.42■■■□□ 2.3
SOD2-206ENST00000452684 BIVM-ERCC5R4GMW8 1640 aa29.39■■■□□ 2.3
SOD2-206ENST00000452684 CUX1P39880 1505 aa29.35■■■□□ 2.29
SOD2-206ENST00000452684 PRDM2Q13029 1718 aa29.32■■■□□ 2.28
SOD2-206ENST00000452684 PCGF6Q9BYE7 350 aa29.24■■■□□ 2.27
SOD2-206ENST00000452684 TNIKQ9UKE5 1360 aa29.2■■■□□ 2.26
SOD2-206ENST00000452684 GOLGA3Q08378 1498 aa29.17■■■□□ 2.26
SOD2-206ENST00000452684 DNAJC5BQ9UF47 199 aa29.14■■■□□ 2.26
SOD2-206ENST00000452684 KIF21BO75037 1637 aa29.13■■■□□ 2.25
SOD2-206ENST00000452684 CEP164Q9UPV0 1460 aa29.12■■■□□ 2.25
SOD2-206ENST00000452684 CEP162Q5TB80 1403 aa29.1■■■□□ 2.25
SOD2-206ENST00000452684 NESP48681 1621 aa29.1■■■□□ 2.25
SOD2-206ENST00000452684 FANCD2Q9BXW9 1451 aa29.1■■■□□ 2.25
SOD2-206ENST00000452684 UBTFP17480 764 aaKnown RBP29.08■■■□□ 2.25
SOD2-206ENST00000452684 TRIM26Q12899 539 aaPredicted RBP29.04■■■□□ 2.24
SOD2-206ENST00000452684 RAPGEF2Q9Y4G8 1499 aa29■■■□□ 2.23
SOD2-206ENST00000452684 LAMC3Q9Y6N6 1575 aa28.97■■■□□ 2.23
SOD2-206ENST00000452684 KIF27Q86VH2 1401 aa28.97■■■□□ 2.23
SOD2-206ENST00000452684 FGD5Q6ZNL6 1462 aa28.93■■■□□ 2.22
SOD2-206ENST00000452684 PRXQ9BXM0 1461 aa28.93■■■□□ 2.22
SOD2-206ENST00000452684 DNMBPQ6XZF7 1577 aa28.86■■■□□ 2.21
SOD2-206ENST00000452684 ERICH3Q5RHP9 1530 aa28.85■■■□□ 2.21
SOD2-206ENST00000452684 CUX2O14529 1486 aa28.83■■■□□ 2.21
SOD2-206ENST00000452684 TOPBP1Q92547 1522 aa28.83■■■□□ 2.21
SOD2-206ENST00000452684 PPARGC1BQ86YN6 1023 aaKnown RBP28.79■■■□□ 2.2
SOD2-206ENST00000452684 PDS5BQ9NTI5 1447 aa28.77■■■□□ 2.2
SOD2-206ENST00000452684 CLIP1P30622 1438 aa28.76■■■□□ 2.19
SOD2-206ENST00000452684 IGF1RP08069 1367 aa28.75■■■□□ 2.19
SOD2-206ENST00000452684 POLA1P09884 1462 aaPredicted RBP28.74■■■□□ 2.19
SOD2-206ENST00000452684 URB2Q14146 1524 aaKnown RBP28.74■■■□□ 2.19
SOD2-206ENST00000452684 HRCP23327 699 aa28.72■■■□□ 2.19
SOD2-206ENST00000452684 RAD54L2Q9Y4B4 1467 aa28.7■■■□□ 2.19
SOD2-206ENST00000452684 ABCA10Q8WWZ4 1543 aa28.66■■■□□ 2.18
SOD2-206ENST00000452684 KIF21AQ7Z4S6 1674 aa28.64■■■□□ 2.17
SOD2-206ENST00000452684 CARMIL1Q5VZK9 1371 aa28.57■■■□□ 2.16
SOD2-206ENST00000452684 RANGAP1P46060 587 aaPredicted RBP28.57■■■□□ 2.16
SOD2-206ENST00000452684 VPS8Q8N3P4 1428 aa28.56■■■□□ 2.16
SOD2-206ENST00000452684 WDR97A6NE52 1622 aa28.48■■■□□ 2.15
SOD2-206ENST00000452684 ARAP1Q96P48 1450 aa28.46■■■□□ 2.15
SOD2-206ENST00000452684 TTBK1Q5TCY1 1321 aaPredicted RBP28.43■■■□□ 2.14
SOD2-206ENST00000452684 MRC2Q9UBG0 1479 aa28.39■■■□□ 2.14
SOD2-206ENST00000452684 TDRD9Q8NDG6 1382 aaKnown RBP28.39■■■□□ 2.13
SOD2-206ENST00000452684 ABCA5Q8WWZ7 1642 aa28.38■■■□□ 2.13
SOD2-206ENST00000452684 ARHGAP35Q9NRY4 1499 aa28.37■■■□□ 2.13
SOD2-206ENST00000452684 TARBP1Q13395 1621 aaKnown RBP28.36■■■□□ 2.13
SOD2-206ENST00000452684 CUL7Q14999 1698 aa28.33■■■□□ 2.13
SOD2-206ENST00000452684 GAPVD1Q14C86 1478 aa28.32■■■□□ 2.12
SOD2-206ENST00000452684 APLP2Q06481 763 aa28.23■■■□□ 2.11
SOD2-206ENST00000452684 WDR62O43379 1518 aa28.22■■■□□ 2.11
SOD2-206ENST00000452684 AQRO60306 1485 aaKnown RBP eCLIP28.13■■■□□ 2.091e-6■■■■■ 33.2
SOD2-206ENST00000452684 ERCC6Q03468 1493 aa28.12■■■□□ 2.09
SOD2-206ENST00000452684 IFT140Q96RY7 1462 aa28.1■■■□□ 2.09
SOD2-206ENST00000452684 CTTNBP2Q8WZ74 1663 aa28.08■■■□□ 2.09
SOD2-206ENST00000452684 KANK4Q5T7N3 995 aaPredicted RBP28.08■■■□□ 2.08
SOD2-206ENST00000452684 ZNF608Q9ULD9 1512 aaPredicted RBP28.05■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 92.8 ms