RNA–Protein interactions for RNA: ENST00000514677.5

SLC41A3-221, Transcript of solute carrier family 41 member 3, humanhuman

TSL 1 (best)

Gene SLC41A3, Length 986 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC41A3-221ENST00000514677 NISCHQ9Y2I1 1504 aa39.95■■■■□ 3.99
SLC41A3-221ENST00000514677 CCDC180Q9P1Z9 1646 aa35.4■■■■□ 3.26
SLC41A3-221ENST00000514677 ABCC9O60706 1549 aa34.52■■■■□ 3.12
SLC41A3-221ENST00000514677 ZCCHC6Q5VYS8 1495 aaKnown RBP33.31■■■□□ 2.92
SLC41A3-221ENST00000514677 NACADO15069 1562 aa33.26■■■□□ 2.92
SLC41A3-221ENST00000514677 RB1CC1Q8TDY2 1594 aa33.26■■■□□ 2.92
SLC41A3-221ENST00000514677 DCAF8L2P0C7V8 631 aa33.23■■■□□ 2.91
SLC41A3-221ENST00000514677 MYO15BQ96JP2 1530 aa33.18■■■□□ 2.9
SLC41A3-221ENST00000514677 DCAF1Q9Y4B6 1507 aa33.11■■■□□ 2.89
SLC41A3-221ENST00000514677 UNC13AQ9UPW8 1703 aa32.57■■■□□ 2.8
SLC41A3-221ENST00000514677 BICRAQ9NZM4 1560 aa32.28■■■□□ 2.76
SLC41A3-221ENST00000514677 SCRIBQ14160 1630 aa32.27■■■□□ 2.76
SLC41A3-221ENST00000514677 PABPN1Q86U42 306 aaKnown RBP eCLIP32.24■■■□□ 2.75
SLC41A3-221ENST00000514677 DNAJC5BQ9UF47 199 aa32.1■■■□□ 2.73
SLC41A3-221ENST00000514677 SHROOM4Q9ULL8 1493 aa31.94■■■□□ 2.7
SLC41A3-221ENST00000514677 EIF4G1Q04637 1599 aaKnown RBP31.4■■■□□ 2.62
SLC41A3-221ENST00000514677 CC2D2AQ9P2K1 1620 aa31.26■■■□□ 2.59
SLC41A3-221ENST00000514677 CECR2Q9BXF3 1484 aa31.07■■■□□ 2.56
SLC41A3-221ENST00000514677 BAZ1AQ9NRL2 1556 aaPredicted RBP30.93■■■□□ 2.54
SLC41A3-221ENST00000514677 SMARCA4P51532 1647 aa30.91■■■□□ 2.54
SLC41A3-221ENST00000514677 MROH2BQ7Z745 1585 aa30.76■■■□□ 2.52
SLC41A3-221ENST00000514677 ATAD2BQ9ULI0 1458 aa30.74■■■□□ 2.51
SLC41A3-221ENST00000514677 NCAPD3P42695 1498 aa30.72■■■□□ 2.51
SLC41A3-221ENST00000514677 SMARCA2P51531 1590 aa30.7■■■□□ 2.5
SLC41A3-221ENST00000514677 PEG3Q9GZU2 1588 aa30.66■■■□□ 2.5
SLC41A3-221ENST00000514677 HMGXB3Q12766 1538 aa30.54■■■□□ 2.48
SLC41A3-221ENST00000514677 RSF1Q96T23 1441 aaPredicted RBP30.52■■■□□ 2.48
SLC41A3-221ENST00000514677 BAZ1BQ9UIG0 1483 aaKnown RBP30.45■■■□□ 2.47
SLC41A3-221ENST00000514677 WIZO95785 1651 aa30.42■■■□□ 2.46
SLC41A3-221ENST00000514677 TOP2AP11388 1531 aaKnown RBP30.13■■■□□ 2.41
SLC41A3-221ENST00000514677 NESP48681 1621 aa29.91■■■□□ 2.38
SLC41A3-221ENST00000514677 LAMC3Q9Y6N6 1575 aa29.86■■■□□ 2.37
SLC41A3-221ENST00000514677 SUPT5HO00267 1087 aaKnown RBP29.85■■■□□ 2.37
SLC41A3-221ENST00000514677 CADPSQ9ULU8 1353 aa29.82■■■□□ 2.36
SLC41A3-221ENST00000514677 CCDC88BA6NC98 1476 aa29.8■■■□□ 2.36
SLC41A3-221ENST00000514677 ERCC6Q03468 1493 aa29.74■■■□□ 2.35
SLC41A3-221ENST00000514677 CFTRP13569 1480 aa29.68■■■□□ 2.34
SLC41A3-221ENST00000514677 PDS5BQ9NTI5 1447 aa29.64■■■□□ 2.34
SLC41A3-221ENST00000514677 DNAJC5Q9H3Z4 198 aa29.63■■■□□ 2.33
SLC41A3-221ENST00000514677 KIF21AQ7Z4S6 1674 aa29.6■■■□□ 2.33
SLC41A3-221ENST00000514677 THOC2Q8NI27 1593 aaKnown RBP29.48■■■□□ 2.31
SLC41A3-221ENST00000514677 PRDM2Q13029 1718 aa29.45■■■□□ 2.31
SLC41A3-221ENST00000514677 CUX2O14529 1486 aa29.44■■■□□ 2.3
SLC41A3-221ENST00000514677 FANCD2Q9BXW9 1451 aa29.43■■■□□ 2.3
SLC41A3-221ENST00000514677 CEP164Q9UPV0 1460 aa29.38■■■□□ 2.29
SLC41A3-221ENST00000514677 MRC2Q9UBG0 1479 aa29.33■■■□□ 2.29
SLC41A3-221ENST00000514677 WDR62O43379 1518 aa29.25■■■□□ 2.27
SLC41A3-221ENST00000514677 URB2Q14146 1524 aaKnown RBP29.15■■■□□ 2.26
SLC41A3-221ENST00000514677 ABCC8Q09428 1581 aa29.05■■■□□ 2.24
SLC41A3-221ENST00000514677 TOPBP1Q92547 1522 aa28.99■■■□□ 2.23
SLC41A3-221ENST00000514677 DNMBPQ6XZF7 1577 aa28.96■■■□□ 2.23
SLC41A3-221ENST00000514677 CUX1P39880 1505 aa28.84■■■□□ 2.21
SLC41A3-221ENST00000514677 IFT140Q96RY7 1462 aa28.78■■■□□ 2.2
SLC41A3-221ENST00000514677 POLA1P09884 1462 aaPredicted RBP28.76■■■□□ 2.19
SLC41A3-221ENST00000514677 WRNQ14191 1432 aaPredicted RBP eCLIP28.75■■■□□ 2.19
SLC41A3-221ENST00000514677 FGD5Q6ZNL6 1462 aa28.71■■■□□ 2.19
SLC41A3-221ENST00000514677 TARBP1Q13395 1621 aaKnown RBP28.67■■■□□ 2.18
SLC41A3-221ENST00000514677 SOGA1O94964 1423 aa28.67■■■□□ 2.18
SLC41A3-221ENST00000514677 TOP2BQ02880 1626 aa28.66■■■□□ 2.18
SLC41A3-221ENST00000514677 BIVM-ERCC5R4GMW8 1640 aa28.65■■■□□ 2.18
SLC41A3-221ENST00000514677 SYNJ1O43426 1573 aa28.63■■■□□ 2.17
SLC41A3-221ENST00000514677 ZNF608Q9ULD9 1512 aaPredicted RBP28.63■■■□□ 2.17
SLC41A3-221ENST00000514677 RAD54L2Q9Y4B4 1467 aa28.62■■■□□ 2.17
SLC41A3-221ENST00000514677 EIF4G3O43432 1585 aaKnown RBP28.54■■■□□ 2.16
SLC41A3-221ENST00000514677 WDR97A6NE52 1622 aa28.48■■■□□ 2.15
SLC41A3-221ENST00000514677 ABCA10Q8WWZ4 1543 aa28.48■■■□□ 2.15
SLC41A3-221ENST00000514677 AQRO60306 1485 aaKnown RBP eCLIP28.47■■■□□ 2.153e-7■■■■■ 30.5
SLC41A3-221ENST00000514677 TDRD9Q8NDG6 1382 aaKnown RBP28.46■■■□□ 2.15
SLC41A3-221ENST00000514677 GAPVD1Q14C86 1478 aa28.33■■■□□ 2.13
SLC41A3-221ENST00000514677 ABCA5Q8WWZ7 1642 aa28.31■■■□□ 2.12
SLC41A3-221ENST00000514677 GRIN2BQ13224 1484 aa28.3■■■□□ 2.12
SLC41A3-221ENST00000514677 PBRM1Q86U86 1689 aa28.26■■■□□ 2.11
SLC41A3-221ENST00000514677 TRIM41Q8WV44 630 aa28.22■■■□□ 2.11
SLC41A3-221ENST00000514677 SNAPC4Q5SXM2 1469 aa28.21■■■□□ 2.11
SLC41A3-221ENST00000514677 MAGI1Q96QZ7 1491 aaPredicted RBP28.21■■■□□ 2.11
SLC41A3-221ENST00000514677 CHD1O14646 1710 aa28.19■■■□□ 2.1
SLC41A3-221ENST00000514677 OSCARQ8IYS5 282 aa28.19■■■□□ 2.1
SLC41A3-221ENST00000514677 KIF27Q86VH2 1401 aa28.15■■■□□ 2.1
SLC41A3-221ENST00000514677 ERICH3Q5RHP9 1530 aa28.14■■■□□ 2.1
SLC41A3-221ENST00000514677 SYNJ2O15056 1496 aa28.09■■■□□ 2.09
SLC41A3-221ENST00000514677 FBLN2P98095 1184 aa28.07■■■□□ 2.08
SLC41A3-221ENST00000514677 CHMP7Q8WUX9 453 aaPredicted RBP28.06■■■□□ 2.08
SLC41A3-221ENST00000514677 IGF1RP08069 1367 aa28.05■■■□□ 2.08
SLC41A3-221ENST00000514677 CHIC1Q5VXU3 224 aa28.04■■■□□ 2.08
SLC41A3-221ENST00000514677 FHAD1B1AJZ9 1412 aa28.02■■■□□ 2.08
SLC41A3-221ENST00000514677 ADAMTS12P58397 1594 aa28.01■■■□□ 2.07
SLC41A3-221ENST00000514677 RUSC2Q8N2Y8 1516 aa27.92■■■□□ 2.06
SLC41A3-221ENST00000514677 GRIN2AQ12879 1464 aa27.92■■■□□ 2.06
SLC41A3-221ENST00000514677 CUL7Q14999 1698 aa27.89■■■□□ 2.06
SLC41A3-221ENST00000514677 CLASP1Q7Z460 1538 aa27.87■■■□□ 2.05
SLC41A3-221ENST00000514677 CARMIL1Q5VZK9 1371 aa27.86■■■□□ 2.05
SLC41A3-221ENST00000514677 NUP160Q12769 1436 aa27.82■■■□□ 2.04
SLC41A3-221ENST00000514677 RIMBP3CA6NJZ7 1639 aa27.79■■■□□ 2.04
SLC41A3-221ENST00000514677 RIMBP3BA6NNM3 1639 aa27.79■■■□□ 2.04
SLC41A3-221ENST00000514677 RIMBP3Q9UFD9 1639 aa27.79■■■□□ 2.04
SLC41A3-221ENST00000514677 CEP170Q5SW79 1584 aa27.78■■■□□ 2.04
SLC41A3-221ENST00000514677 EEA1Q15075 1411 aa27.77■■■□□ 2.04
SLC41A3-221ENST00000514677 ARHGEF11O15085 1522 aa27.77■■■□□ 2.04
SLC41A3-221ENST00000514677 CSRNP3Q8WYN3 585 aa27.71■■■□□ 2.03
SLC41A3-221ENST00000514677 RAPGEF2Q9Y4G8 1499 aa27.7■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 128.8 ms