RNA–Protein interactions for RNA: ENST00000592870.5

PALM-209, Transcript of paralemmin, humanhuman

TSL 2

Gene PALM, Length 1,346 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALM-209ENST00000592870 NISCHQ9Y2I1 1504 aa39.01■■■■□ 3.84
PALM-209ENST00000592870 AEBP2Q6ZN18 517 aaPredicted RBP35.41■■■■□ 3.26
PALM-209ENST00000592870 CCDC180Q9P1Z9 1646 aa34.71■■■■□ 3.15
PALM-209ENST00000592870 ABCC9O60706 1549 aa34.48■■■■□ 3.11
PALM-209ENST00000592870 CHIC1Q5VXU3 224 aa33.96■■■■□ 3.03
PALM-209ENST00000592870 RB1CC1Q8TDY2 1594 aa32.88■■■□□ 2.85
PALM-209ENST00000592870 NACADO15069 1562 aa32.78■■■□□ 2.84
PALM-209ENST00000592870 DCAF8L2P0C7V8 631 aa32.72■■■□□ 2.83
PALM-209ENST00000592870 MYO15BQ96JP2 1530 aa32.49■■■□□ 2.79
PALM-209ENST00000592870 ZCCHC6Q5VYS8 1495 aaKnown RBP32.41■■■□□ 2.78
PALM-209ENST00000592870 PABPN1Q86U42 306 aaKnown RBP eCLIP32.23■■■□□ 2.75
PALM-209ENST00000592870 DCAF1Q9Y4B6 1507 aa32.22■■■□□ 2.75
PALM-209ENST00000592870 DNAJC5BQ9UF47 199 aa32.17■■■□□ 2.74
PALM-209ENST00000592870 UNC13AQ9UPW8 1703 aa32.14■■■□□ 2.74
PALM-209ENST00000592870 BICRAQ9NZM4 1560 aa32.05■■■□□ 2.72
PALM-209ENST00000592870 SCRIBQ14160 1630 aa31.73■■■□□ 2.67
PALM-209ENST00000592870 SHROOM4Q9ULL8 1493 aa31.52■■■□□ 2.64
PALM-209ENST00000592870 EIF4G1Q04637 1599 aaKnown RBP31.17■■■□□ 2.58
PALM-209ENST00000592870 CC2D2AQ9P2K1 1620 aa31.13■■■□□ 2.57
PALM-209ENST00000592870 CECR2Q9BXF3 1484 aa31■■■□□ 2.55
PALM-209ENST00000592870 NCAPD3P42695 1498 aa30.34■■■□□ 2.45
PALM-209ENST00000592870 ATAD2BQ9ULI0 1458 aa30.31■■■□□ 2.44
PALM-209ENST00000592870 SMARCA4P51532 1647 aa30.31■■■□□ 2.44
PALM-209ENST00000592870 SENP3Q9H4L4 574 aaPredicted RBP30.28■■■□□ 2.44
PALM-209ENST00000592870 BAZ1AQ9NRL2 1556 aaPredicted RBP30.19■■■□□ 2.42
PALM-209ENST00000592870 SMARCA2P51531 1590 aa30.13■■■□□ 2.41
PALM-209ENST00000592870 MROH2BQ7Z745 1585 aa30.11■■■□□ 2.41
PALM-209ENST00000592870 HMGXB3Q12766 1538 aa30.08■■■□□ 2.41
PALM-209ENST00000592870 PEG3Q9GZU2 1588 aa30.03■■■□□ 2.4
PALM-209ENST00000592870 BAZ1BQ9UIG0 1483 aaKnown RBP29.95■■■□□ 2.39
PALM-209ENST00000592870 PHF23Q9BUL5 403 aaPredicted RBP29.95■■■□□ 2.38
PALM-209ENST00000592870 NESP48681 1621 aa29.78■■■□□ 2.36
PALM-209ENST00000592870 WIZO95785 1651 aa29.7■■■□□ 2.35
PALM-209ENST00000592870 ERCC6Q03468 1493 aa29.64■■■□□ 2.34
PALM-209ENST00000592870 RSF1Q96T23 1441 aaPredicted RBP29.63■■■□□ 2.33
PALM-209ENST00000592870 CUX2O14529 1486 aa29.5■■■□□ 2.31
PALM-209ENST00000592870 LAMC3Q9Y6N6 1575 aa29.49■■■□□ 2.31
PALM-209ENST00000592870 CADPSQ9ULU8 1353 aa29.43■■■□□ 2.3
PALM-209ENST00000592870 TOP2AP11388 1531 aaKnown RBP29.34■■■□□ 2.29
PALM-209ENST00000592870 PDS5BQ9NTI5 1447 aa29.33■■■□□ 2.29
PALM-209ENST00000592870 THOC2Q8NI27 1593 aaKnown RBP29.32■■■□□ 2.28
PALM-209ENST00000592870 KIF21AQ7Z4S6 1674 aa29.27■■■□□ 2.28
PALM-209ENST00000592870 CFTRP13569 1480 aa29.18■■■□□ 2.26
PALM-209ENST00000592870 DNAJC5Q9H3Z4 198 aa29.15■■■□□ 2.26
PALM-209ENST00000592870 MRC2Q9UBG0 1479 aa29.09■■■□□ 2.25
PALM-209ENST00000592870 CCDC88BA6NC98 1476 aa29.07■■■□□ 2.24
PALM-209ENST00000592870 FANCD2Q9BXW9 1451 aa29.07■■■□□ 2.24
PALM-209ENST00000592870 CEP164Q9UPV0 1460 aa29.01■■■□□ 2.24
PALM-209ENST00000592870 WDR62O43379 1518 aa29.01■■■□□ 2.23
PALM-209ENST00000592870 URB2Q14146 1524 aaKnown RBP28.85■■■□□ 2.21
PALM-209ENST00000592870 PRDM2Q13029 1718 aa28.71■■■□□ 2.19
PALM-209ENST00000592870 TOPBP1Q92547 1522 aa28.57■■■□□ 2.16
PALM-209ENST00000592870 SUPT5HO00267 1087 aaKnown RBP28.54■■■□□ 2.16
PALM-209ENST00000592870 DNMBPQ6XZF7 1577 aa28.46■■■□□ 2.15
PALM-209ENST00000592870 ZNF608Q9ULD9 1512 aaPredicted RBP28.46■■■□□ 2.15
PALM-209ENST00000592870 IFT140Q96RY7 1462 aa28.45■■■□□ 2.14
PALM-209ENST00000592870 ABCC8Q09428 1581 aa28.43■■■□□ 2.14
PALM-209ENST00000592870 POLA1P09884 1462 aaPredicted RBP28.31■■■□□ 2.12
PALM-209ENST00000592870 TARBP1Q13395 1621 aaKnown RBP28.29■■■□□ 2.12
PALM-209ENST00000592870 CUX1P39880 1505 aa28.25■■■□□ 2.11
PALM-209ENST00000592870 RAD54L2Q9Y4B4 1467 aa28.24■■■□□ 2.11
PALM-209ENST00000592870 OSCARQ8IYS5 282 aa28.23■■■□□ 2.11
PALM-209ENST00000592870 AQRO60306 1485 aaKnown RBP eCLIP28.22■■■□□ 2.117e-6■■□□□ 13.1
PALM-209ENST00000592870 EIF4G3O43432 1585 aaKnown RBP28.21■■■□□ 2.11
PALM-209ENST00000592870 SOGA1O94964 1423 aa28.18■■■□□ 2.1
PALM-209ENST00000592870 FGD5Q6ZNL6 1462 aa28.17■■■□□ 2.1
PALM-209ENST00000592870 FOXD1Q16676 465 aa28.15■■■□□ 2.1
PALM-209ENST00000592870 TDRD9Q8NDG6 1382 aaKnown RBP28.12■■■□□ 2.09
PALM-209ENST00000592870 TRIM41Q8WV44 630 aa27.96■■■□□ 2.07
PALM-209ENST00000592870 WDR97A6NE52 1622 aa27.91■■■□□ 2.06
PALM-209ENST00000592870 SNAPC4Q5SXM2 1469 aa27.91■■■□□ 2.06
PALM-209ENST00000592870 ABCA10Q8WWZ4 1543 aa27.88■■■□□ 2.05
PALM-209ENST00000592870 CHD1O14646 1710 aa27.88■■■□□ 2.05
PALM-209ENST00000592870 FBLN2P98095 1184 aa27.88■■■□□ 2.05
PALM-209ENST00000592870 WRNQ14191 1432 aaPredicted RBP eCLIP27.87■■■□□ 2.05
PALM-209ENST00000592870 GRIN2BQ13224 1484 aa27.86■■■□□ 2.05
PALM-209ENST00000592870 SYNJ1O43426 1573 aa27.86■■■□□ 2.05
PALM-209ENST00000592870 TOP2BQ02880 1626 aa27.83■■■□□ 2.05
PALM-209ENST00000592870 GAPVD1Q14C86 1478 aa27.82■■■□□ 2.04
PALM-209ENST00000592870 RIMBP3CA6NJZ7 1639 aa27.82■■■□□ 2.04
PALM-209ENST00000592870 RIMBP3BA6NNM3 1639 aa27.82■■■□□ 2.04
PALM-209ENST00000592870 RIMBP3Q9UFD9 1639 aa27.82■■■□□ 2.04
PALM-209ENST00000592870 BIVM-ERCC5R4GMW8 1640 aa27.81■■■□□ 2.04
PALM-209ENST00000592870 PLPPR3Q6T4P5 718 aa27.8■■■□□ 2.04
PALM-209ENST00000592870 MAGI1Q96QZ7 1491 aaPredicted RBP27.8■■■□□ 2.04
PALM-209ENST00000592870 ARHGEF11O15085 1522 aa27.8■■■□□ 2.04
PALM-209ENST00000592870 ABCA5Q8WWZ7 1642 aa27.78■■■□□ 2.04
PALM-209ENST00000592870 CHMP7Q8WUX9 453 aaPredicted RBP27.74■■■□□ 2.03
PALM-209ENST00000592870 SYNJ2O15056 1496 aa27.72■■■□□ 2.03
PALM-209ENST00000592870 PBRM1Q86U86 1689 aa27.69■■■□□ 2.02
PALM-209ENST00000592870 CLASP1Q7Z460 1538 aa27.68■■■□□ 2.02
PALM-209ENST00000592870 ARAP1Q96P48 1450 aa27.59■■■□□ 2.01
PALM-209ENST00000592870 CYB5RLQ6IPT4 315 aa27.58■■■□□ 2.01
PALM-209ENST00000592870 ADAMTS12P58397 1594 aa27.54■■■□□ 2
PALM-209ENST00000592870 GRIN2AQ12879 1464 aa27.52■■■□□ 2
PALM-209ENST00000592870 FHAD1B1AJZ9 1412 aa27.49■■□□□ 1.99
PALM-209ENST00000592870 ERICH3Q5RHP9 1530 aa27.49■■□□□ 1.99
PALM-209ENST00000592870 NUP160Q12769 1436 aa27.45■■□□□ 1.98
PALM-209ENST00000592870 CEP170Q5SW79 1584 aa27.42■■□□□ 1.98
PALM-209ENST00000592870 IGF1RP08069 1367 aa27.35■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms